mRNA_P-littoralis_Contig175.64.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig175.64.1 vs. uniprot
Match: D7FRH6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRH6_ECTSI) HSP 1 Score: 477 bits (1228), Expect = 1.470e-161 Identity = 234/335 (69.85%), Postives = 272/335 (81.19%), Query Frame = 3
Query: 288 IKLEFLDPKTITDSQIDEVTHAVSKAFNDFNTTIGATREVMDEEFGDPDVTPLVLNGICKSYEGYAAVADNGSGRIVGVSFVDVHAKGSRVATLGPVSSVAPGAGKMTFVAACAHAEKLGFSTLILMQVASNSRSFSLYAKLGFEVKHTCQYVGGFLERPNGDSLPXXXXXXXXXXXXXXXXXXLSLNAMVAGDVEECADIFLAAHGGDCGWDRRADITGALGAGYPYSMLVARDACGKVVGYTTGFFISGHTVATSQDVFCAMFKESSRLHQQGGLPCPRFHCPVEFSSLLSWSLAQPGLKVFRATIIMARGHYEHTPWPHPAGYVVAPSIMGY 1292
++L FLDPKTI DSQ+DEVTH VS+AF DFNT+IGA EV +EEFG P+ P ++ ICKS+E YA VAD G+G+IVGVSFVDVHAKGSRVA LGPVSS+APGAGK +FVAACA+AE+LGFSTL+LMQ+A+NSRSFSLYAKLGFE KHTCQY+GGFLE P+ SL ++L AMVAGDVEECA++FL AHG CGWDRRADITG L +G P+ MLVARDA GKVVGYTTGF++ GHTVA SQD+FC MF+ESS+LHQQ GLPCPRFHCPVEF+ LLSW+LAQ GL++FRATI+MARGHYEHTPW G VVAPS G+
Sbjct: 4 LELAFLDPKTIKDSQMDEVTHVVSRAFQDFNTSIGAPVEVYEEEFGHPETGPGIIQSICKSHEAYAVVADGGAGKIVGVSFVDVHAKGSRVACLGPVSSIAPGAGKKSFVAACAYAEELGFSTLVLMQIAANSRSFSLYAKLGFETKHTCQYMGGFLEPPSEGSLSPPPAPSG-----------VTLKAMVAGDVEECAEMFLEAHGKGCGWDRRADITGCLESGAPFPMLVARDADGKVVGYTTGFYLMGHTVAKSQDIFCDMFRESSKLHQQAGLPCPRFHCPVEFTGLLSWALAQKGLRIFRATIVMARGHYEHTPWQDAIGNVVAPSASGH 327
BLAST of mRNA_P-littoralis_Contig175.64.1 vs. uniprot
Match: D7FVW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVW9_ECTSI) HSP 1 Score: 474 bits (1219), Expect = 3.360e-160 Identity = 230/334 (68.86%), Postives = 272/334 (81.44%), Query Frame = 3
Query: 291 KLEFLDPKTITDSQIDEVTHAVSKAFNDFNTTIGATREVMDEEFGDPDVTPLVLNGICKSYEGYAAVADNGSGRIVGVSFVDVHAKGSRVATLGPVSSVAPGAGKMTFVAACAHAEKLGFSTLILMQVASNSRSFSLYAKLGFEVKHTCQYVGGFLERPNGDSLPXXXXXXXXXXXXXXXXXXLSLNAMVAGDVEECADIFLAAHGGDCGWDRRADITGALGAGYPYSMLVARDACGKVVGYTTGFFISGHTVATSQDVFCAMFKESSRLHQQGGLPCPRFHCPVEFSSLLSWSLAQPGLKVFRATIIMARGHYEHTPWPHPAGYVVAPSIMGY 1292
+L F+DPK+I DSQ+DEVT VSKAF DFNT+I EV +EEFG P + P V+ ICKSYEGYA V D G+G+IVGVSFVDVHAKGS+VATLGPV+S+A GAGK +FVAAC +AE+LGFSTLIL Q+A+NSRSFSLYAKLGFE KHT QY+GGFLE+P+ SLP ++L AMVAGDVEECA++FL AHG DCGWDRRADITG LG+G+P+ MLVARDA GKVVGY+TGFF+ GHTVA SQD+FC MF+E S+LH+Q GLPCP+F+CPVEF+ LLSW LAQ GLKVFRA++IMARGHYEHTPWP+ AG++VAPS GY
Sbjct: 5 ELVFIDPKSINDSQVDEVTQVVSKAFQDFNTSINTPVEVYEEEFGHPAIGPTVIQSICKSYEGYAVVEDGGAGKIVGVSFVDVHAKGSKVATLGPVASLASGAGKKSFVAACDYAEELGFSTLILTQIAANSRSFSLYAKLGFETKHTVQYIGGFLEQPSEGSLPLPPAPSG-----------VTLKAMVAGDVEECAELFLEAHGKDCGWDRRADITGCLGSGFPFPMLVARDANGKVVGYSTGFFMIGHTVAKSQDIFCYMFREGSKLHKQAGLPCPKFYCPVEFTGLLSWCLAQKGLKVFRASLIMARGHYEHTPWPNAAGHIVAPSTTGY 327
BLAST of mRNA_P-littoralis_Contig175.64.1 vs. uniprot
Match: D7FRH7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH7_ECTSI) HSP 1 Score: 195 bits (496), Expect = 3.370e-55 Identity = 98/140 (70.00%), Postives = 118/140 (84.29%), Query Frame = 3
Query: 333 IDEVTHAVSKAFNDFNTTIGATREVMDEEFGDPDVTPLVLNGICKSYEGYAAVADNGSGRIVGVSFVDVHAKGSRVATLGPVSSVAPGAGKMTFVAACAHAEKLGFSTLILMQVASNSRSFSLYAKLGFEVKHTCQYVGG 752
+DEVTH VSKAF DFNT++GA EV +EEFG P+ P ++ ICKS+E YA VAD G+G+IVGVSFVDVHAKGSRVA LGPVSS+APGAGK +FVAACA+AE+LGFSTL+LMQ+A+NSRSFSLYAKLGFE + + + G
Sbjct: 1 MDEVTHVVSKAFQDFNTSMGAPVEVYEEEFGHPETGPGIIQSICKSHEAYAVVADGGAGKIVGVSFVDVHAKGSRVACLGPVSSIAPGAGKKSFVAACAYAEELGFSTLVLMQIAANSRSFSLYAKLGFEGQASLKVTTG 140
BLAST of mRNA_P-littoralis_Contig175.64.1 vs. uniprot
Match: A0A6H5KFB4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFB4_9PHAE) HSP 1 Score: 169 bits (429), Expect = 5.290e-45 Identity = 124/344 (36.05%), Postives = 149/344 (43.31%), Query Frame = 3
Query: 324 DSQIDEVTHAVSKAFNDFNTTIGATREVMDEEFGDPDVTPLVLNG------------ICKSY---------EGYAAVADNGSGRIVGVSFVDVHAKGSRVATLGPVSSVAPGAGKMTFVAACAHAEKLGFSTLILMQVASNSRSFSLYAKLGFEVKHTCQYVGGFLERPNGDSLPXXXXXXXXXXXXXXXXXXLSLNAMVAGDVEECADIFLAAHGGDCGWDRRADITGALGAGYPYSMLVARDACGKVVGYTTGFFISGHTVATSQDVFCAMFKESSRLHQQGGLPCPRFHCPVEFSSLLSWSLAQPGLKVFRATIIMARGHYEHTPWPHPAGYVVAPSIMGY 1292
DSQ+DEVT VSKA DFNT++ A EV +E+FG P + P V+ + K + A V D G+G+IVGVSFVDVHAKGSRVATLGPV+S+A GAGK +FVAACA+AE+LGFSTL GG P D GKVVGY+TG RF+CPVEF+ LLSW LAQ GLKVFRA++IMARGH+EHTPWP+ G++VAPS GY
Sbjct: 4 DSQVDEVTQVVSKACQDFNTSVNAPVEVYEEDFGHPAIGPTVIQRAGAFRPPCIRRKLGKIFISSNAPTHPSSSAPVEDGGAGKIVGVSFVDVHAKGSRVATLGPVASLASGAGKNSFVAACAYAEELGFSTL----------------------------AGG----PRSD--------------------------------------------------------------------------GKVVGYSTGTI--------------------------------RFYCPVEFTGLLSWCLAQKGLKVFRASLIMARGHFEHTPWPNATGHIVAPSTTGY 209
BLAST of mRNA_P-littoralis_Contig175.64.1 vs. uniprot
Match: A0A6H5K2U2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2U2_9PHAE) HSP 1 Score: 140 bits (353), Expect = 4.630e-36 Identity = 60/85 (70.59%), Postives = 71/85 (83.53%), Query Frame = 3
Query: 1038 GHTVATSQDVFCAMFKESSRLHQQGGLPCPRFHCPVEFSSLLSWSLAQPGLKVFRATIIMARGHYEHTPWPHPAGYVVAPSIMGY 1292
GHTVA S D+ C MF+ESS+LHQQ GLPCPRFHC VEF+ LLSW+LAQ GLK+FRATI+MARGHYEHTPW G+++AP+ GY
Sbjct: 2 GHTVAKSHDIICDMFRESSKLHQQAGLPCPRFHCRVEFTGLLSWALAQRGLKIFRATILMARGHYEHTPWQDTIGHLMAPTASGY 86
BLAST of mRNA_P-littoralis_Contig175.64.1 vs. uniprot
Match: A0A6H5K5T0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5T0_9PHAE) HSP 1 Score: 113 bits (282), Expect = 4.370e-24 Identity = 58/89 (65.17%), Postives = 69/89 (77.53%), Query Frame = 3
Query: 339 EVTHAVSKAFNDFNTTIGATREVMDEEFGDPDVTPLVLNGICKSYEGYAAVADNGSGRIVGVSFVDVHAKGSRVATLGPVSSVAPGAGK 605
EVTH VSKAF DFNT+I A E+ +EEFG P+ ++ ICKS+E YA VAD G+G+IVGV FVDVHAKGS+ A LG VSS+APGAGK
Sbjct: 3 EVTHVVSKAFQDFNTSIHAPVELYEEEFGCPETGTGMIQSICKSHEAYAVVADGGTGKIVGVPFVDVHAKGSKEACLGAVSSIAPGAGK 91
BLAST of mRNA_P-littoralis_Contig175.64.1 vs. uniprot
Match: UPI0009A4F06D (GNAT family N-acetyltransferase n=1 Tax=Streptomyces sp. 3211 TaxID=1964449 RepID=UPI0009A4F06D) HSP 1 Score: 95.9 bits (237), Expect = 5.500e-18 Identity = 87/313 (27.80%), Postives = 138/313 (44.09%), Query Frame = 3
Query: 327 SQIDEVTHAVSKAFNDFNTTIGATREVMDEEFGDPDVTPLVLNGICKSYEGYAAVA--DNGSGRIVGVSFVDVHAKGSRVATLGPVSSVAP----GAGKMTFVAACAHAEKLGFSTLILMQVASNSRSFSLYAKLGFEVKHTCQYVGGFLERPNGDSLPXXXXXXXXXXXXXXXXXXLSLNAMVAGDVEECADIFLAAHGGDCGWDRRADITGALGAGYPYS-MLVARDACGKVVGYTTGFFISGHTVATSQDVFCAMFKESSRLHQQGGLPCPRFHCPVEF--SSLLSWSLAQPGLKVFRATIIMARGHYEH 1238
+ ++E++ +FN FN ++G E EF V + + GY A D SGRI+G +F++ H VA GP+S G G+M + A+ A+++G ++ +Q+ASN +SF LYA++GF + + GF + + M GD+ C IF +G + R DI A P++ V +A +VGYTTG + GH S+D A+F +S+L Q+ P H P SLL + G+KV R +++RG Y +
Sbjct: 13 ADVEEMSRVFFHSFNSFNDSVGLPPEWPSLEFCQHAVQGFL------DHPGYMAFTALDRLSGRILGSNFLEYH---DSVAAPGPISVAEEFQGVGVGRMLWQASLDAAQEIGKESVQAVQLASNVKSFGLYARMGFIPREQLIALTGFPSQ-----------------YPELEYERFLVRPMEMGDIHACGTIFERING----YSRAHDIALAASGKSPWADPYVVENADKSIVGYTTGLSLLGHMCCNSEDAMQALFLHASKLMQERQKNPPLIHLPGRLYPESLLQFLTV--GVKVLRLETLISRGVYNY 293
BLAST of mRNA_P-littoralis_Contig175.64.1 vs. uniprot
Match: A9P0X9_PICSI (N-acetyltransferase domain-containing protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9P0X9_PICSI) HSP 1 Score: 84.7 bits (208), Expect = 2.460e-14 Identity = 83/293 (28.33%), Postives = 135/293 (46.08%), Query Frame = 3
Query: 360 KAFNDFNTTIGATREVMDEEFGDPDVTPLVLNGICKSYEGYAAVA-DNGSGRIVGVSFVDVHAKGSRVATLGPVSSVAP-----GAGKMTFVAACAHAEKLGFSTLILMQVASNSRSFSLYAKLGFEVKHTCQYVGGFLERP--NGDSLPXXXXXXXXXXXXXXXXXXLSLNAMVAGDVEECADIFLAAHGGDCGWDRRADITGALGAGYPYSMLVARDACGKVVGYTTGFFISGHTVATSQDVFCAMFKESSRLHQQGGLPCPRFHCPVEFSS-LLSWSLAQPGLKVFRATI 1211
+AF+ FN ++G V ++G+ ++ VL+ + +S Y A DN SG +G +F++ G V +GPV V P GAGK A A+ +++ L+Q+A+N++SFSLYAKLGF+ Y G ++ +G S + M DV C+++ H G +R DI L S + +D + YTTGF + GH++A S+D F +F+ L ++ G H P L+ W+L + GL++ R +
Sbjct: 26 RAFSQFNLSVGIPPHV---DYGNVEIAKKVLHEMLQSPSSYGITAFDNASGLPIGAAFLNFT--GESVQAVGPVF-VDPDWNNKGAGKALMNALIERAKATNATSIRLVQIAANTQSFSLYAKLGFQPVECISYFEGSMDENLHSGASF----------------IPGFKVKMMEESDVHACSEL----HKSVLGHERETDIRELLQTNPGNSWVAVKDDI--LQAYTTGFCLEGHSIAISEDAFKTLFEVV--LCEKRGCSMT-IHIPGRIHPFLIDWALKR-GLRLVRLRV 286
BLAST of mRNA_P-littoralis_Contig175.64.1 vs. uniprot
Match: R1DNJ0_EMIHU (Uncharacterized protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DNJ0_EMIHU) HSP 1 Score: 78.2 bits (191), Expect = 7.670e-12 Identity = 86/302 (28.48%), Postives = 119/302 (39.40%), Query Frame = 3
Query: 333 IDEVTHAVSKAFNDFNTTIGATREVMDEEFGDPDVTPLVLNGICKSYEGYAA-VADNGSGRIVGVSFVDVHAKGSRVATLGPVSSVAPGAGKMTFVAACAHAEKLGFSTLILMQVASNSRSFSLYAKLGFEVKHTCQYVGGFLERPNGDSLPXXXXXXXXXXXXXXXXXXLSLNAMVAGDVEECADIFLAAHGGDCGWDRRADITGALGAGYPYSMLVARDACGKVVGYTTGFFISGHTVATSQDVFCAMFKESSRL---HQQGG--LPCPRFHCPVEFSSLLSWSLAQPGLKVFRATIIMA 1220
+DE AFN FN ++G E E D P L G+ VA + G +VG + ++ + GP++S PGAGK+ A A + A R+ Y G T + GF+ +P + A DVEEC+ A H C R DI A+G P+ VARD GKVVGYTTG ++SGHTVA S++ A+ S Q G +P P P + S+ W LA+ G + R M+
Sbjct: 6 LDEAASIAFSAFNAFNESVGLAPEFPPREVVD---VPKYLYSSGLERPGFDVFVAVDEEGTVVGANMLEYQDGIGGIGXXGPIASKRPGAGKLLMQAVMKAAAE---------HPACPRRTCIEYVGSGC---CTAEAPAGFVVKP-----------------------------LAASDVEECS----ALHEQVCASRRMGDIGSAVGG--PHPNAVARDEAGKVVGYTTGSYLSGHTVALSEEALQALVVAQSAAIAAAQAAGAPIPPPTLFVPHQHSAFARW-LARNGFLLTRQIASMS 256
BLAST of mRNA_P-littoralis_Contig175.64.1 vs. uniprot
Match: UPI001F55A25F (GNAT family N-acetyltransferase n=2 Tax=Nostoc TaxID=1177 RepID=UPI001F55A25F) HSP 1 Score: 74.7 bits (182), Expect = 9.840e-11 Identity = 81/304 (26.64%), Postives = 133/304 (43.75%), Query Frame = 3
Query: 390 GATREVMDEEFGDPDVTPLVLNGICKSYEGYAAVADNGSGRIVGVSFVDVHAKGSRVATLGPVSSVAPGA-----GKMTFVAACAHAEKLGFSTLILMQVASNSRSFSLYAKLGFEVKHTCQYVGGFLERPNGDSLPXXXXXXXXXXXXXXXXXXLSLNAMVAGDVEECADIFLAAHGGDCGWDRRADITGALGAGYPYSMLVARDACGKVVGYTTGFFISGHTVATSQDVFCAMFKESSRLHQQGGLPCPRFHCPVEFSSLLSWSLAQPGLKVFRATIIMARGHYEHTPWPHPAGYVVAPSIM 1286
G + EFG +T ++ + Y+ VA+ GR++G +F+ +G +A +GP ++V P A G+ A + ++ + L+Q A NSRS SLY KLGF+V+ + F +P ++P S+ M D+ C + HG DR ++ A+G G +MLV D G+V GYT+ GH VA + + A+ + + G F+ P+ + L W L GL+V + +M+ G Y PAG + PS++
Sbjct: 80 GLAPDFPSAEFGAAMLTEILADPAV-----YSVVAEASDGRVIGSNFLW---EGDTIAGVGP-TTVDPAAQNRSVGRRLMEDVLQRAREKRYAGVRLVQAAHNSRSLSLYTKLGFDVREP---LANFEGKPLSLTIPGR-----------------SVRLMTEADLAVCNQLCDRIHG----HDRAGELKAAIGRGT--AMLVECD--GRVSGYTSEIGFFGHAVAENNEDLKALIAAAPASAELG------FYVPMRNADLFRWCLNH-GLRVTQTATLMSLGLYNE-----PAGAFL-PSVL 333 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig175.64.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig175.64.1 >prot_P-littoralis_Contig175.64.1 ID=prot_P-littoralis_Contig175.64.1|Name=mRNA_P-littoralis_Contig175.64.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=338bp MNIKLEFLDPKTITDSQIDEVTHAVSKAFNDFNTTIGATREVMDEEFGDPback to top mRNA from alignment at P-littoralis_Contig175:320784..331443+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig175.64.1 ID=mRNA_P-littoralis_Contig175.64.1|Name=mRNA_P-littoralis_Contig175.64.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=10660bp|location=Sequence derived from alignment at P-littoralis_Contig175:320784..331443+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig175:320784..331443+ >mRNA_P-littoralis_Contig175.64.1 ID=mRNA_P-littoralis_Contig175.64.1|Name=mRNA_P-littoralis_Contig175.64.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1014bp|location=Sequence derived from alignment at P-littoralis_Contig175:320784..331443+ (Pylaiella littoralis U1_48)back to top |