prot_P-littoralis_Contig175.39.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig175.39.1
Unique Nameprot_P-littoralis_Contig175.39.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length261
Homology
BLAST of mRNA_P-littoralis_Contig175.39.1 vs. uniprot
Match: D7FVX7_ECTSI (Proliferating cell nuclear antigen n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVX7_ECTSI)

HSP 1 Score: 479 bits (1233), Expect = 2.480e-170
Identity = 239/260 (91.92%), Postives = 251/260 (96.54%), Query Frame = 0
Query:    1 MYEARLIQGSLLKKIIEAVRELVTEANLDCSESGISMQAMDSSHVSLCALMIRSDGFDHYRCDRSISLGLSMGNISKILKCAGNDDTVTLKAEDTADSLTIMFESKNQDRISDFELKLMDIDNEHLGIPKTEYNCMIQMPSAEFARIMKDLAVIGDTCTIACDKDGVNFSVEGELGKGNIMVRNNTSVDKEEDKVTVTMEEPVTLQFALRYLTLFTKATPLGPVVTISMTPDNPVVVEYPIDTFGYVRYYLAPKIDEADE 260
            MYEARL+Q SLLKKIIEAVRELVT+ANLDCSESGISMQAMDSSHVSLCALMIRSDGF HYRCDRS+SLGLS G+ISKILKCAGNDDTVTLKAEDTAD+LTIMFES  QDRISDFELKLMDID+EHLGIPKTEYNC+IQMPSAEFARIM+DL VIGDTCTIACDKDGVNFSV G++GKGNIMVRNNTSVDKEEDKVTVTMEEPVTL+FALRYL+LF KATPLGP VTISMTPDNPVVVEYPIDTFGYVRYYLAPKIDEADE
Sbjct:    1 MYEARLLQASLLKKIIEAVRELVTDANLDCSESGISMQAMDSSHVSLCALMIRSDGFQHYRCDRSLSLGLSTGSISKILKCAGNDDTVTLKAEDTADALTIMFESPKQDRISDFELKLMDIDSEHLGIPKTEYNCIIQMPSAEFARIMRDLQVIGDTCTIACDKDGVNFSVSGDMGKGNIMVRNNTSVDKEEDKVTVTMEEPVTLKFALRYLSLFAKATPLGPTVTISMTPDNPVVVEYPIDTFGYVRYYLAPKIDEADE 260          
BLAST of mRNA_P-littoralis_Contig175.39.1 vs. uniprot
Match: A0A812RGX4_SYMMI (Proliferating cell nuclear antigen n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RGX4_SYMMI)

HSP 1 Score: 380 bits (975), Expect = 4.940e-131
Identity = 177/257 (68.87%), Postives = 223/257 (86.77%), Query Frame = 0
Query:    1 MYEARLIQGSLLKKIIEAVRELVTEANLDCSESGISMQAMDSSHVSLCALMIRSDGFDHYRCDRSISLGLSMGNISKILKCAGNDDTVTLKAEDTADSLTIMFESKNQDRISDFELKLMDIDNEHLGIPKTEYNCMIQMPSAEFARIMKDLAVIGDTCTIACDKDGVNFSVEGELGKGNIMVRNNTSVDKEEDKVTVTMEEPVTLQFALRYLTLFTKATPLGPVVTISMTPDNPVVVEYPIDTFGYVRYYLAPKIDE 257
            M+EARL+QG++LKKIIEA+RELV +ANLDCS +GISMQAMDSSHVSLCAL++R++ FDHYRCD  +SLGL+  N+SKILKCAGNDD VTLK+ D +D+LT++FES  QDRISDF++KLM+I++EHLGIP TEY+C +++PS+EF RIM+DL V+GDTCTIAC K+GV FS  G+LG GNI++++N SVDK+ED V + M+EPV L FALRYL  FTKATPLGP VT+S++PD P++VEYP+   GYVRYYLAPKIDE
Sbjct:    2 MFEARLVQGAILKKIIEAIRELVIDANLDCSSTGISMQAMDSSHVSLCALLMRAEAFDHYRCDVDMSLGLNTPNLSKILKCAGNDDVVTLKSTDQSDTLTLVFESSKQDRISDFDMKLMEIESEHLGIPDTEYSCTVRLPSSEFQRIMRDLTVLGDTCTIACTKEGVRFSASGDLGTGNILLKHNASVDKDEDAVVIDMQEPVELLFALRYLNTFTKATPLGPTVTLSLSPDLPILVEYPVGDLGYVRYYLAPKIDE 258          
BLAST of mRNA_P-littoralis_Contig175.39.1 vs. uniprot
Match: A0A835ZEE1_9STRA (Proliferating cell nuclear antigen n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEE1_9STRA)

HSP 1 Score: 374 bits (961), Expect = 6.670e-129
Identity = 179/260 (68.85%), Postives = 222/260 (85.38%), Query Frame = 0
Query:    1 MYEARLIQGSLLKKIIEAVRELVTEANLDCSESGISMQAMDSSHVSLCALMIRSDGFDHYRCDRSISLGLSMGNISKILKCAGNDDTVTLKAEDTADSLTIMFESKNQDRISDFELKLMDIDNEHLGIPKTEYNCMIQMPSAEFARIMKDLAVIGDTCTIACDKDGVNFSVEGELGKGNIMVRNNTSVDKEEDKVTVTMEEPVTLQFALRYLTLFTKATPLGPVVTISMTPDNPVVVEYPIDTFGYVRYYLAPKIDEADE 260
            M+EA+L + SLLKKI+EA+RELVT+ANLDCSE+GI+MQAMDSSHVSLCAL +RSDGFDHYRCDR++SLGL++ N+SKILKCAGN+D  TL+ ED AD+LT+ FES  Q+RIS+FELKL+ +D EHLGIP T Y   ++MPSAEF RI++DL+VIGDTC+IA  KDGV F VEG+LG G+I V+ NT+ +KEE++V V MEEPV L FALRYL  F KATPLGP+V +SM+PD PVVVE+PI+T GY+R+YLAPKIDE +E
Sbjct:    1 MFEAKLNEASLLKKIVEAIRELVTDANLDCSEAGITMQAMDSSHVSLCALNLRSDGFDHYRCDRNLSLGLNLANLSKILKCAGNNDVCTLRTEDDADTLTVTFESPKQERISEFELKLIALDAEHLGIPDTNYKAQVRMPSAEFQRIIRDLSVIGDTCSIAVGKDGVRFGVEGDLGSGSISVKQNTAAEKEEERVEVHMEEPVELTFALRYLNFFAKATPLGPIVALSMSPDVPVVVEFPIETVGYLRFYLAPKIDEEEE 260          
BLAST of mRNA_P-littoralis_Contig175.39.1 vs. uniprot
Match: A0A7S2DHU7_9STRA (Proliferating cell nuclear antigen n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DHU7_9STRA)

HSP 1 Score: 372 bits (955), Expect = 8.330e-128
Identity = 177/261 (67.82%), Postives = 221/261 (84.67%), Query Frame = 0
Query:    1 MYEARLIQGSLLKKIIEAVRELVTEANLDCSESGISMQAMDSSHVSLCALMIRSDGFDHYRCDRSISLGLSMGNISKILKCAGNDDTVTLKAEDTADSLTIMFESKNQDRISDFELKLMDIDNEHLGIPKTEYNCMIQMPSAEFARIMKDLAVIGDTCTIACDKDGVNFSVEGELGKGNIMVRNNT-SVDKEEDKVTVTMEEPVTLQFALRYLTLFTKATPLGPVVTISMTPDNPVVVEYPIDTFGYVRYYLAPKIDEADE 260
            M+EARLIQG+LLKKI+EAVR+LVT+AN+DC E G+S+QAMDSSHVSLCAL++RSDGFDHYRCDR ISLGL++GN+ KILKC+GNDD VTLK+ED  D LTIMFE+   DRISDFE+KLMDID E LGIP+ EY C I+MPS EF R+++DL VIGDTCTI   K+G+ FSV G++G GN+M+R    S +KEED+V + M+EP  L FA+RYL++FTKA+ LGP V +SM+PD P+VVEYPI+TFG+VR+YLAPK+DE D+
Sbjct:   11 MFEARLIQGNLLKKIVEAVRDLVTDANVDCKEQGLSLQAMDSSHVSLCALVLRSDGFDHYRCDRPISLGLNLGNLGKILKCSGNDDVVTLKSEDQGDLLTIMFENPAADRISDFEMKLMDIDAEQLGIPEQEYACNIRMPSGEFQRLIRDLMVIGDTCTIGVTKEGIKFSVSGDIGNGNVMLRATVGSTEKEEDQVVIEMDEPCELTFAMRYLSMFTKASGLGPTVNLSMSPDVPIVVEYPIETFGHVRFYLAPKLDEGDD 271          
BLAST of mRNA_P-littoralis_Contig175.39.1 vs. uniprot
Match: A0A7S2UVI1_9STRA (Proliferating cell nuclear antigen n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVI1_9STRA)

HSP 1 Score: 370 bits (949), Expect = 4.800e-127
Identity = 173/261 (66.28%), Postives = 226/261 (86.59%), Query Frame = 0
Query:    1 MYEARLIQGSLLKKIIEAVRELVTEANLDCSESGISMQAMDSSHVSLCALMIRSDGFDHYRCDRSISLGLSMGNISKILKCAGNDDTVTLKAEDTADSLTIMFESKNQDRISDFELKLMDIDNEHLGIPKTEYNCMIQMPSAEFARIMKDLAVIGDTCTIACDKDGVNFSVEGELGKGNIMVRNNTSVD-KEEDKVTVTMEEPVTLQFALRYLTLFTKATPLGPVVTISMTPDNPVVVEYPIDTFGYVRYYLAPKIDEADE 260
            M+EARLI G L +KII+A+++LVTEAN+ C+E+GIS+QAMDSSHVSLC LM+R+D +DH+RCDR+++LGL+ GN++KILKCAGNDD +T+KAED  D L ++FESK+Q RISDFE+KLMDI +EHLGIP TEY C +QMP+AEF RI++DL+VIG+TCTI+C KDGV FSVEG+LG G+I +R+ +  D KEE++V +TM+EPV LQFALRYL+ FTKA+PLGP ++ISM+PD PVVVE+PI+  GY++YYLAPKID  +E
Sbjct:    1 MFEARLINGGLFRKIIDAIKDLVTEANIHCNENGISLQAMDSSHVSLCVLMLRNDMYDHFRCDRALALGLNTGNVAKILKCAGNDDIITMKAEDEPDVLQMVFESKDQSRISDFEMKLMDIQSEHLGIPDTEYKCTVQMPAAEFTRIVRDLSVIGETCTISCSKDGVKFSVEGDLGTGSITLRSTSDADTKEEERVVITMDEPVELQFALRYLSSFTKASPLGPTMSISMSPDVPVVVEFPIEGDGYIKYYLAPKIDGGEE 261          
BLAST of mRNA_P-littoralis_Contig175.39.1 vs. uniprot
Match: A0A835YRT1_9STRA (Proliferating cell nuclear antigen n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRT1_9STRA)

HSP 1 Score: 369 bits (946), Expect = 1.280e-126
Identity = 176/260 (67.69%), Postives = 221/260 (85.00%), Query Frame = 0
Query:    1 MYEARLIQGSLLKKIIEAVRELVTEANLDCSESGISMQAMDSSHVSLCALMIRSDGFDHYRCDRSISLGLSMGNISKILKCAGNDDTVTLKAEDTADSLTIMFESKNQDRISDFELKLMDIDNEHLGIPKTEYNCMIQMPSAEFARIMKDLAVIGDTCTIACDKDGVNFSVEGELGKGNIMVRNNTSVDKEEDKVTVTMEEPVTLQFALRYLTLFTKATPLGPVVTISMTPDNPVVVEYPIDTFGYVRYYLAPKIDEADE 260
            M+EA L + SLLKKI++++RELVT+ANLDCS++GI+MQAMDSSHVSLCAL +R+DGFDH+RCDR++SLG+++ N+SKILKCAGN D VTLK+ED AD+L + FES  QDRIS+FELKL+ +D EHLGIP T Y   I+MPS +F RI++DL VIGDTCTI+  K+GV FSVEG+LG GNI V+ N + +KEE+KV V +EEPV+L FALRYL  FTKATPLGP+V +SM+PD P+VVEYPIDT G+VR+YLAPKIDE +E
Sbjct:    1 MFEATLSEASLLKKIVDSIRELVTDANLDCSDAGINMQAMDSSHVSLCALSLRNDGFDHFRCDRNLSLGVNLANLSKILKCAGNTDLVTLKSEDDADTLGVKFESAKQDRISEFELKLIALDAEHLGIPDTNYKAQIRMPSTDFQRIIRDLQVIGDTCTISATKEGVRFSVEGDLGAGNIAVKQNPNAEKEEEKVEVHIEEPVSLTFALRYLNFFTKATPLGPIVALSMSPDVPIVVEYPIDTTGFVRFYLAPKIDEDEE 260          
BLAST of mRNA_P-littoralis_Contig175.39.1 vs. uniprot
Match: W7TJJ6_9STRA (Proliferating cell nuclear antigen n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJJ6_9STRA)

HSP 1 Score: 365 bits (938), Expect = 2.040e-125
Identity = 178/258 (68.99%), Postives = 213/258 (82.56%), Query Frame = 0
Query:    1 MYEARLIQGSLLKKIIEAVRELVTEANLDCSESGISMQAMDSSHVSLCALMIRSDGFDHYRCDRSISLGLSMGNISKILKCAGNDDTVTLKAEDTADSLTIMFESKNQDRISDFELKLMDIDNEHLGIPKTEYNCMIQMPSAEFARIMKDLAVIGDTCTIACDKDGVNFSVEGELGKGNIMVRNNTSVDKEE-DKVTVTMEEPVTLQFALRYLTLFTKATPLGPVVTISMTPDNPVVVEYPIDTFGYVRYYLAPKIDE 257
            M+EARL +GSLLKKIIEA+++LV EAN+DCSE G++MQAMD+SHVSLC+L +R  GFDHYRCDRSISLGL++ N+ KILKCAGNDD VTLKAED  D+LT+MFES NQ+RISDFELKLMDI+ EHLGIP  EY C I MPS EF RI++DLAVIG+TC I C K+GV FSV G+LG GN+ VR +++ D +E D+V + MEEPVTL FALRYL  FTKATPLG  V + M+PD P+VVEYPID  G + Y+LAPKIDE
Sbjct:    1 MFEARLTEGSLLKKIIEAIKDLVQEANVDCSEEGLTMQAMDASHVSLCSLNMRHGGFDHYRCDRSISLGLNLANLGKILKCAGNDDVVTLKAEDEPDTLTLMFESPNQERISDFELKLMDIETEHLGIPNEEYKCTISMPSGEFQRIVRDLAVIGETCIITCTKEGVKFSVSGDLGNGNVTVRQSSAADGDEKDQVKIQMEEPVTLNFALRYLGFFTKATPLGSTVKLHMSPDVPIVVEYPIDGIGSISYFLAPKIDE 258          
BLAST of mRNA_P-littoralis_Contig175.39.1 vs. uniprot
Match: B8BWU2_THAPS (Proliferating cell nuclear antigen n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWU2_THAPS)

HSP 1 Score: 359 bits (922), Expect = 5.940e-123
Identity = 170/260 (65.38%), Postives = 214/260 (82.31%), Query Frame = 0
Query:    1 MYEARLIQGSLLKKIIEAVRELVTEANLDCSESGISMQAMDSSHVSLCALMIRSDGFDHYRCDRSISLGLSMGNISKILKCAGNDDTVTLKAEDTADSLTIMFESKNQDRISDFELKLMDIDNEHLGIPKTEYNCMIQMPSAEFARIMKDLAVIGDTCTIACDKDGVNFSVEGELGKGNIMVRNNTSVDKEEDKVTVTMEEPVTLQFALRYLTLFTKATPLGPVVTISMTPDNPVVVEYPIDTFGYVRYYLAPKIDEADE 260
            M+EARL QG + K++IEA+++LV EAN+DC++  IS+QAMD+SHVSL A+ +RS GFDH+RCDR ISLG +  N+ KILKCAGNDD +TL+AED  DSL ++FES  QDRI+DFELKLMDIDNE LGIP TEY C IQMPSAEF RI++DL V+GDTCTI+C K+GV FSV G+LG GN++VR N++ +K+E+KV + M+EPV L FALRYL  FTKAT LGP V +SM+P+ PVVVEYPI   G+++YYLAPKIDE +E
Sbjct:    1 MFEARLTQGKVFKQLIEALKDLVQEANIDCTDDEISIQAMDNSHVSLVAVSLRSGGFDHFRCDRPISLGFNAANMGKILKCAGNDDVITLRAEDEGDSLALVFESPGQDRIADFELKLMDIDNEQLGIPDTEYKCTIQMPSAEFQRIIRDLQVLGDTCTISCTKEGVKFSVSGDLGSGNVLVRQNSAAEKDEEKVMIEMDEPVELTFALRYLNFFTKATSLGPTVILSMSPEVPVVVEYPIGETGHIKYYLAPKIDEDEE 260          
BLAST of mRNA_P-littoralis_Contig175.39.1 vs. uniprot
Match: A0A7R9WGG0_9STRA (Proliferating cell nuclear antigen n=2 Tax=Odontellaceae TaxID=2749909 RepID=A0A7R9WGG0_9STRA)

HSP 1 Score: 361 bits (926), Expect = 7.490e-123
Identity = 170/259 (65.64%), Postives = 214/259 (82.63%), Query Frame = 0
Query:    1 MYEARLIQGSLLKKIIEAVRELVTEANLDCSESGISMQAMDSSHVSLCALMIRSDGFDHYRCDRSISLGLSMGNISKILKCAGNDDTVTLKAEDTADSLTIMFESKNQDRISDFELKLMDIDNEHLGIPKTEYNCMIQMPSAEFARIMKDLAVIGDTCTIACDKDGVNFSVEGELGKGNIMVRNNTSVDKEEDKVTVTMEEPVTLQFALRYLTLFTKATPLGPVVTISMTPDNPVVVEYPIDTFGYVRYYLAPKIDEAD 259
            M+EARL QG + K +IE++++LV +ANL+CSE  IS+QAMDSSHVSL A+ +R+ GFDHYRCDR +SLG +  N+SKILKC+GNDD +TLKAED  DSLT+MFES +QDRI+DFELKLMDID+E LGIP TEY C I+MPS EF RI++D+ V+GDTC I+C K+GV FSV G+LG GN+++RNN + +KEED+V + MEEPV L FALRYL  FTKAT LGP V ISM+PD P+VVEYPI++ G ++YYLAPKIDE +
Sbjct:   50 MFEARLTQGRIFKSLIESIKDLVQDANLECSEDEISIQAMDSSHVSLVAVALRASGFDHYRCDRPLSLGFNSANLSKILKCSGNDDKITLKAEDNGDSLTLMFESGSQDRIADFELKLMDIDSEQLGIPDTEYKCTIKMPSTEFQRIVRDMQVLGDTCVISCTKEGVRFSVSGDLGTGNVLIRNNANAEKEEDQVLIDMEEPVELTFALRYLNFFTKATALGPSVIISMSPDVPIVVEYPIESSGEIKYYLAPKIDENE 308          
BLAST of mRNA_P-littoralis_Contig175.39.1 vs. uniprot
Match: L1IQM8_GUITC (Proliferating cell nuclear antigen n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IQM8_GUITC)

HSP 1 Score: 353 bits (907), Expect = 9.890e-121
Identity = 166/257 (64.59%), Postives = 217/257 (84.44%), Query Frame = 0
Query:    1 MYEARLIQGSLLKKIIEAVRELVTEANLDCSESGISMQAMDSSHVSLCALMIRSDGFDHYRCDRSISLGLSMGNISKILKCAGNDDTVTLKAEDTADSLTIMFESKNQDRISDFELKLMDIDNEHLGIPKTEYNCMIQMPSAEFARIMKDLAVIGDTCTIACDKDGVNFSVEGELGKGNIMVRNNTSVDKEEDKVTVTMEEPVTLQFALRYLTLFTKATPLGPVVTISMTPDNPVVVEYPIDTFGYVRYYLAPKIDE 257
            M+EARL QGSLLKK+IEA+RELVT+AN D S SG+S+QAMD+SHVSL +L++R DGF+H+RCDRS+SLGL++ +I+K+LKCA NDD +TLKAED  D+LT+MFES NQDRISDFE+KLMDID+EHLGIP TEY   ++M +AEF RIM+DL+ IGDT +I+C K+ V FSVEG++G+GN+++R+N +VDKE++   + +EEPV+L FALRYL LFTKATPL   VT+SM+PD P+V EY +   G +R++LAPKIDE
Sbjct:    1 MFEARLAQGSLLKKLIEAIRELVTDANFDVSTSGVSLQAMDTSHVSLVSLLLREDGFEHFRCDRSLSLGLNLASITKMLKCANNDDAITLKAEDQGDTLTLMFESPNQDRISDFEIKLMDIDSEHLGIPDTEYKATVKMSAAEFQRIMRDLSTIGDTVSISCTKEAVKFSVEGDIGQGNVIMRHNAAVDKEDEATIIELEEPVSLTFALRYLNLFTKATPLSSTVTLSMSPDVPLVTEYKVGDMGNIRFFLAPKIDE 257          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig175.39.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVX7_ECTSI2.480e-17091.92Proliferating cell nuclear antigen n=2 Tax=Ectocar... [more]
A0A812RGX4_SYMMI4.940e-13168.87Proliferating cell nuclear antigen n=1 Tax=Symbiod... [more]
A0A835ZEE1_9STRA6.670e-12968.85Proliferating cell nuclear antigen n=1 Tax=Tribone... [more]
A0A7S2DHU7_9STRA8.330e-12867.82Proliferating cell nuclear antigen n=1 Tax=Dictyoc... [more]
A0A7S2UVI1_9STRA4.800e-12766.28Proliferating cell nuclear antigen n=1 Tax=Fibroca... [more]
A0A835YRT1_9STRA1.280e-12667.69Proliferating cell nuclear antigen n=1 Tax=Tribone... [more]
W7TJJ6_9STRA2.040e-12568.99Proliferating cell nuclear antigen n=2 Tax=Monodop... [more]
B8BWU2_THAPS5.940e-12365.38Proliferating cell nuclear antigen n=1 Tax=Thalass... [more]
A0A7R9WGG0_9STRA7.490e-12365.64Proliferating cell nuclear antigen n=2 Tax=Odontel... [more]
L1IQM8_GUITC9.890e-12164.59Proliferating cell nuclear antigen n=2 Tax=Guillar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000730Proliferating cell nuclear antigen, PCNAPRINTSPR00339PCNACYCLINcoord: 10..29
score: 52.38
coord: 203..217
score: 65.08
coord: 34..52
score: 62.91
coord: 110..132
score: 65.01
coord: 56..80
score: 56.38
coord: 241..258
score: 53.44
IPR000730Proliferating cell nuclear antigen, PCNATIGRFAMTIGR00590TIGR00590coord: 1..258
e-value: 9.7E-116
score: 383.7
IPR000730Proliferating cell nuclear antigen, PCNAHAMAPMF_00317DNApol_clamp_archcoord: 2..255
score: 19.347651
NoneNo IPR availableGENE3D3.10.150.10DNA Polymerase III, subunit A, domain 2coord: 1..162
e-value: 2.9E-73
score: 246.8
NoneNo IPR availableGENE3D3.10.150.10DNA Polymerase III, subunit A, domain 2coord: 163..259
e-value: 1.2E-33
score: 117.0
NoneNo IPR availablePANTHERPTHR11352PROLIFERATING CELL NUCLEAR ANTIGENcoord: 1..259
NoneNo IPR availablePANTHERPTHR11352:SF8PROLIFERATING CELL NUCLEAR ANTIGENcoord: 1..259
NoneNo IPR availableCDDcd00577PCNAcoord: 4..256
e-value: 1.81815E-95
score: 278.744
NoneNo IPR availableSUPERFAMILY55979DNA clampcoord: 127..255
NoneNo IPR availableSUPERFAMILY55979DNA clampcoord: 1..126
IPR022649Proliferating cell nuclear antigen, PCNA, C-terminalPFAMPF02747PCNA_Ccoord: 127..254
e-value: 2.3E-47
score: 160.4
IPR022648Proliferating cell nuclear antigen, PCNA, N-terminalPFAMPF00705PCNA_Ncoord: 1..124
e-value: 2.3E-54
score: 182.5
IPR022659Proliferating cell nuclear antigen, PCNA, conserved sitePROSITEPS00293PCNA_2coord: 61..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig175contigP-littoralis_Contig175:188265..192880 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig175.39.1mRNA_P-littoralis_Contig175.39.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig175 187494..192943 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig175.39.1 ID=prot_P-littoralis_Contig175.39.1|Name=mRNA_P-littoralis_Contig175.39.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=261bp
MYEARLIQGSLLKKIIEAVRELVTEANLDCSESGISMQAMDSSHVSLCAL
MIRSDGFDHYRCDRSISLGLSMGNISKILKCAGNDDTVTLKAEDTADSLT
IMFESKNQDRISDFELKLMDIDNEHLGIPKTEYNCMIQMPSAEFARIMKD
LAVIGDTCTIACDKDGVNFSVEGELGKGNIMVRNNTSVDKEEDKVTVTME
EPVTLQFALRYLTLFTKATPLGPVVTISMTPDNPVVVEYPIDTFGYVRYY
LAPKIDEADE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000730Pr_cel_nuc_antig
IPR022649Pr_cel_nuc_antig_C
IPR022648Pr_cel_nuc_antig_N
IPR022659Pr_cel_nuc_antig_CS