mRNA_P-littoralis_Contig175.1.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig175.1.1
Unique NamemRNA_P-littoralis_Contig175.1.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig175.1.1 vs. uniprot
Match: D7FVZ8_ECTSI (Transaldolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVZ8_ECTSI)

HSP 1 Score: 415 bits (1066), Expect = 2.680e-139
Identity = 209/228 (91.67%), Postives = 219/228 (96.05%), Query Frame = 1 
Query:    1 DARLSYDTEATVAKGRSIIALYEAAGIDKSRVLIKIASTWEGIKACEILQKEGITCNMTLLFCLAQAVACAEAGATLISPFVGRITDWYKADTGRSGYSPEEDPGCLSVSEIYGYYKKHGHPTIVMGASFRNKGQILQLAGCDRLTIAPKFLEELKAGTATVERVLEPEKASKAYLGGRYPADLKSFRLKLNEDAMATEKLAEGIASFSQAIVKVEKIITDKIEAASS 684
            DARLSYDTEATVAKGRSI+ALY+AAGIDKSRVLIKIASTWEGI+ACEILQKEGI+CNMTLLFC+AQAVACAEAGATLISPFVGRITDWYKADTGRSGY+ EEDPGCLSVSEI+GYYKKHGH TIVMGASFRNKGQILQLAGCDRLTIAPKFLEELK+GT  VER LEPE AS AY GGRYPADLKSFRLKLNE+AMATEKLAEGIASFSQAIVKVEKIITDKI AAS+
Sbjct:  466 DARLSYDTEATVAKGRSIVALYKAAGIDKSRVLIKIASTWEGIRACEILQKEGISCNMTLLFCMAQAVACAEAGATLISPFVGRITDWYKADTGRSGYAAEEDPGCLSVSEIFGYYKKHGHGTIVMGASFRNKGQILQLAGCDRLTIAPKFLEELKSGTEKVERKLEPETASTAYSGGRYPADLKSFRLKLNENAMATEKLAEGIASFSQAIVKVEKIITDKIAAAST 693
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BLAST of mRNA_P-littoralis_Contig175.1.1 vs. uniprot
Match: A0A6H5KHP6_9PHAE (Transaldolase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHP6_9PHAE)

HSP 1 Score: 404 bits (1037), Expect = 1.100e-138
Identity = 209/246 (84.96%), Postives = 218/246 (88.62%), Query Frame = 1 
Query:    1 DARLSYDTEATVAKGRSIIALYEAAGIDKSRVLIKIASTWEGIKACEILQKEGITCNMTLLFCLAQAVACAEAGATLISPFVGRITDWYKADTGRSGYSPEEDPGCLSVSEIYGYYKKHGHPTIVMGASFRNKGQILQLAGCDRLTIAPKFLE------------------ELKAGTATVERVLEPEKASKAYLGGRYPADLKSFRLKLNEDAMATEKLAEGIASFSQAIVKVEKIITDKIEAASS 684
            DARLSYDTEATVAKGRSI+ALY+AAGIDKSRVLIKIASTWEGI+ACEILQKEGI+CNMTLLFC+AQAVACAEAGATLISPFVGRITDWYKADTGRSGY+ EEDPGCLSVSEIYGYYKKHGH TIVMGASFRNKGQILQLAGCDRLTIAPKFLE                  ELK GT  VER LEPE ASKAY GGRYPAD KSFRLKLNE+AMATEKLAEGIASFSQAIVKVEKIITD+I AAS+
Sbjct:  169 DARLSYDTEATVAKGRSIVALYKAAGIDKSRVLIKIASTWEGIRACEILQKEGISCNMTLLFCMAQAVACAEAGATLISPFVGRITDWYKADTGRSGYAAEEDPGCLSVSEIYGYYKKHGHGTIVMGASFRNKGQILQLAGCDRLTIAPKFLEVGEDXXXXXXXXXXYGNGELKGGTEKVERKLEPETASKAYSGGRYPADSKSFRLKLNENAMATEKLAEGIASFSQAIVKVEKIITDRIAAAST 414
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BLAST of mRNA_P-littoralis_Contig175.1.1 vs. uniprot
Match: A0A8K1CJ33_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJ33_PYTOL)

HSP 1 Score: 301 bits (771), Expect = 1.790e-99
Identity = 152/223 (68.16%), Postives = 176/223 (78.92%), Query Frame = 1 
Query:    1 DARLSYDTEATVAKGRSIIALYEAAGIDKSRVLIKIASTWEGIKACEILQKEGITCNMTLLFCLAQAVACAEAGATLISPFVGRITDWYKADTGRSGYSPEEDPGCLSVSEIYGYYKKHGHPTIVMGASFRNKGQILQLAGCDRLTIAPKFLEELKAGTATVERVLEPEKASKAYLGGRYPADLKSFRLKLNEDAMATEKLAEGIASFSQAIVKVEKIITDKI 669
            DARLS+DTEAT+ +   II LYE AGI K R+LIKIASTWEGI+AC+ LQ+EGI+CNMTLLF  AQAVACAEA ATLISPFVGRI DWYKA TG++GY   EDPG LSV++IY YYKK+GH TIVMGASFRN G+I +LAGCDRLTI+P  L+EL   T  V R L+PE A+  Y+G     D KSFRL LNEDAMATEKLAEGI  FS  IVK+E+I+  K+
Sbjct:  109 DARLSFDTEATIERAHRIIKLYEDAGISKDRILIKIASTWEGIQACKHLQQEGISCNMTLLFGFAQAVACAEANATLISPFVGRILDWYKAKTGKAGYESHEDPGVLSVTKIYQYYKKYGHKTIVMGASFRNTGEITELAGCDRLTISPNLLDELSESTTPVIRKLDPESAAMNYVGDSVSFDEKSFRLSLNEDAMATEKLAEGIRGFSADIVKLEEILKAKL 331
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BLAST of mRNA_P-littoralis_Contig175.1.1 vs. uniprot
Match: A0A484E7C0_BRELC (Transaldolase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E7C0_BRELC)

HSP 1 Score: 294 bits (753), Expect = 9.920e-97
Identity = 148/225 (65.78%), Postives = 176/225 (78.22%), Query Frame = 1 
Query:    1 DARLSYDTEATVAKGRSIIALYEAAGIDKSRVLIKIASTWEGIKACEILQKEGITCNMTLLFCLAQAVACAEAGATLISPFVGRITDWYKADTGRSGYSPEEDPGCLSVSEIYGYYKKHGHPTIVMGASFRNKGQILQLAGCDRLTIAPKFLEELKAGTATVERVLEPEKASKAYLGGRYPADLKSFRLKLNEDAMATEKLAEGIASFSQAIVKVEKIITDKIEA 675
            DAR+S+DTEAT+A+   II LYE AGI K R+LIKIASTWEGI+AC  LQKEGI+CNMTLLF  AQAV+CAEAGATLISPFVGRI DW+KA TG++ Y P EDPG +SV++IY YYKK+ + TIVMGASFRN G+I +LAGCDRLTI+P  LEEL   TA + + L+PE A KAY G +     K FRL +NEDAMATEKLAEGI  FS  IVK+E+I+   + A
Sbjct:  110 DARMSFDTEATIARAHRIIELYEKAGIKKDRILIKIASTWEGIQACRHLQKEGISCNMTLLFGFAQAVSCAEAGATLISPFVGRILDWHKAKTGKTSYEPHEDPGVVSVTKIYQYYKKYEYETIVMGASFRNTGEITELAGCDRLTISPALLEELNTATAKLVKKLDPETAIKAYTGEKISYAEKEFRLSMNEDAMATEKLAEGIRGFSADIVKLEQILKIMLSA 334
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BLAST of mRNA_P-littoralis_Contig175.1.1 vs. uniprot
Match: A0A662XW57_9STRA (Transaldolase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XW57_9STRA)

HSP 1 Score: 294 bits (753), Expect = 9.920e-97
Identity = 146/225 (64.89%), Postives = 178/225 (79.11%), Query Frame = 1 
Query:    1 DARLSYDTEATVAKGRSIIALYEAAGIDKSRVLIKIASTWEGIKACEILQKEGITCNMTLLFCLAQAVACAEAGATLISPFVGRITDWYKADTGRSGYSPEEDPGCLSVSEIYGYYKKHGHPTIVMGASFRNKGQILQLAGCDRLTIAPKFLEELKAGTATVERVLEPEKASKAYLGGRYPADLKSFRLKLNEDAMATEKLAEGIASFSQAIVKVEKIITDKIEA 675
            DARLS+DTEAT+A+   I+ LYE AGI K R+LIKIASTWEGI+AC+ LQKEGI+CNMTLLF  AQAV CAEAGATLISPFVGRI DW+KA TG+S Y   EDPG +SV++IY YYKK+G+ TIVMGASFRN G+I +L GCDRLTI+P  LE+L   T  +E+ L+ E+++KAY+G +     K FRL +NEDAMATEKLAEGI  FS  IVK+E+I+  K+ A
Sbjct:  110 DARLSFDTEATIARAHRILELYEKAGITKDRILIKIASTWEGIQACKQLQKEGISCNMTLLFGFAQAVGCAEAGATLISPFVGRILDWHKAKTGKSSYEAHEDPGVVSVTKIYQYYKKYGYKTIVMGASFRNTGEITELTGCDRLTISPNLLEDLTKSTDKLEKKLDEEESAKAYVGEKISYAEKDFRLSMNEDAMATEKLAEGIRGFSADIVKLEQILKTKLNA 334
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BLAST of mRNA_P-littoralis_Contig175.1.1 vs. uniprot
Match: H3G883_PHYRM (Transaldolase n=20 Tax=Peronosporaceae TaxID=4777 RepID=H3G883_PHYRM)

HSP 1 Score: 293 bits (749), Expect = 4.010e-96
Identity = 147/225 (65.33%), Postives = 176/225 (78.22%), Query Frame = 1 
Query:    1 DARLSYDTEATVAKGRSIIALYEAAGIDKSRVLIKIASTWEGIKACEILQKEGITCNMTLLFCLAQAVACAEAGATLISPFVGRITDWYKADTGRSGYSPEEDPGCLSVSEIYGYYKKHGHPTIVMGASFRNKGQILQLAGCDRLTIAPKFLEELKAGTATVERVLEPEKASKAYLGGRYPADLKSFRLKLNEDAMATEKLAEGIASFSQAIVKVEKIITDKIEA 675
            DARLS+DTE+T+A+   II LYE AGI K R+LIKIASTWEGI+AC+ LQ+EGI+CNMTLLF  AQAV CAEAGATLISPFVGRI DW+KA TG+S Y   EDPG +SV++IY YYKK+ + TIVMGASFRN G+I +LAGCDRLTI+P  LEEL   T  +E+ L+ E A KAY G +   D K FR+ +NEDAMATEKLAEGI  FS  IVK+E+I+  K+ A
Sbjct:  110 DARLSFDTESTIARAHRIIDLYEKAGIKKDRILIKIASTWEGIQACKKLQEEGISCNMTLLFGFAQAVGCAEAGATLISPFVGRILDWHKAKTGKSSYESHEDPGVVSVTKIYQYYKKYDYKTIVMGASFRNTGEITELAGCDRLTISPNLLEELTKTTTKLEKKLDSETAGKAYTGEKLSYDEKDFRVSMNEDAMATEKLAEGIRGFSADIVKLEQILKAKLSA 334
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BLAST of mRNA_P-littoralis_Contig175.1.1 vs. uniprot
Match: A0A7S1DAK2_CYCTE (Transaldolase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DAK2_CYCTE)

HSP 1 Score: 286 bits (733), Expect = 5.250e-94
Identity = 141/223 (63.23%), Postives = 178/223 (79.82%), Query Frame = 1 
Query:    1 DARLSYDTEATVAKGRSIIALYEAAGIDKSRVLIKIASTWEGIKACEILQKEGITCNMTLLFCLAQAVACAEAGATLISPFVGRITDWYKADTGRSGYSPEEDPGCLSVSEIYGYYKKHGHPTIVMGASFRNKGQILQLAGCDRLTIAPKFLEELKAGTATVERVLEPEKASKAYLGGRYPADLKSFRLKLNEDAMATEKLAEGIASFSQAIVKVEKIITDKI 669
            DARLS+DTEAT+ K R +I LY+ AG+DKSR+LIKIA+TWEGI+A E+L+KEGITCN+TL+F +AQA+ACAEA  TLISPFVGRI DWYK   G  GY+PEEDPG  SV+ IY YYKK+G+ TIVMGASFRNKG+ILQLAGCDRLTI+PK L+E+ A T  V++ L+ E A+   +  +     ++FR  +NEDAMATEKLAEGI +F++ IVK+E I+  K+
Sbjct:   91 DARLSFDTEATIQKARRLIELYKEAGVDKSRILIKIAATWEGIRAAEVLEKEGITCNLTLIFSIAQAIACAEAKCTLISPFVGRIMDWYKKTEGVDGYAPEEDPGVKSVTAIYNYYKKYGYETIVMGASFRNKGEILQLAGCDRLTISPKLLDEMAASTEPVKKHLDAEAATSMDIE-KIEMSAENFRWMMNEDAMATEKLAEGIRNFAKDIVKLEDIVKSKM 312
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BLAST of mRNA_P-littoralis_Contig175.1.1 vs. uniprot
Match: A0A0P1AH91_PLAHL (Transaldolase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AH91_PLAHL)

HSP 1 Score: 287 bits (734), Expect = 7.520e-94
Identity = 145/223 (65.02%), Postives = 172/223 (77.13%), Query Frame = 1 
Query:    1 DARLSYDTEATVAKGRSIIALYEAAGIDKSRVLIKIASTWEGIKACEILQKEGITCNMTLLFCLAQAVACAEAGATLISPFVGRITDWYKADTGRSGYSPEEDPGCLSVSEIYGYYKKHGHPTIVMGASFRNKGQILQLAGCDRLTIAPKFLEELKAGTATVERVLEPEKASKAYLGGRYPADLKSFRLKLNEDAMATEKLAEGIASFSQAIVKVEKIITDKI 669
            DARLS+DT+ T+A+   II LYE AGI K R+LIKIASTWEGI+AC+ LQKEGI+CNMTLLF  AQAV CAEAGATLISPFVGRI DW+KA  G+S Y P EDPG +SV+ IY YYKK+ + TIVMGASFRN G+I +LAGCDRLTI+P  LEEL   T  + + L+PE A+KA    +   D K FRL +NEDAMATEKLAEGI  FS  IVK+E+I+  K+
Sbjct:  110 DARLSFDTKNTIARAHRIIELYEKAGIQKDRILIKIASTWEGIQACKHLQKEGISCNMTLLFGFAQAVGCAEAGATLISPFVGRILDWHKAKIGKSSYEPHEDPGVVSVTSIYQYYKKYNYQTIVMGASFRNTGEITELAGCDRLTISPALLEELAESTEALTKKLDPETAAKACSIEKLSFDEKEFRLSMNEDAMATEKLAEGIRGFSADIVKLEQILKTKL 332
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BLAST of mRNA_P-littoralis_Contig175.1.1 vs. uniprot
Match: A0A3R7G829_9STRA (Transaldolase n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G829_9STRA)

HSP 1 Score: 295 bits (754), Expect = 2.520e-93
Identity = 148/225 (65.78%), Postives = 175/225 (77.78%), Query Frame = 1 
Query:    1 DARLSYDTEATVAKGRSIIALYEAAGIDKSRVLIKIASTWEGIKACEILQKEGITCNMTLLFCLAQAVACAEAGATLISPFVGRITDWYKADTGRSGYSPEEDPGCLSVSEIYGYYKKHGHPTIVMGASFRNKGQILQLAGCDRLTIAPKFLEELKAGTATVERVLEPEKASKAYLGGRYPADLKSFRLKLNEDAMATEKLAEGIASFSQAIVKVEKIITDKIEA 675
            DARLS+DTE T+A+   II LYE AGI K R+LIKIASTWEGI+AC+ LQKEGI+CNMTLLF  AQAV CA+AGATLISPFVGRI DW+KA TG+S Y   EDPG +SV++IY YYKK+ + TIVMGASFRN G+I +LAGCDRLTI+P  LEEL   TA +E+ L+ E A KAY G     D K FRL +NEDAMATEKL+EGI  FS  IVK+E+I+  K+ A
Sbjct:  396 DARLSFDTEGTIARAHRIIDLYEKAGIKKDRILIKIASTWEGIQACKHLQKEGISCNMTLLFGFAQAVGCAQAGATLISPFVGRILDWHKAKTGKSSYESHEDPGVVSVTKIYQYYKKYDYKTIVMGASFRNTGEITELAGCDRLTISPNLLEELTKSTAKLEKKLDAETAGKAYTGENLSYDEKDFRLSMNEDAMATEKLSEGIRGFSADIVKLEQILKTKLSA 620
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BLAST of mRNA_P-littoralis_Contig175.1.1 vs. uniprot
Match: F0W3G4_9STRA (Transaldolase n=2 Tax=Albugo TaxID=65356 RepID=F0W3G4_9STRA)

HSP 1 Score: 285 bits (730), Expect = 2.850e-93
Identity = 146/223 (65.47%), Postives = 173/223 (77.58%), Query Frame = 1 
Query:    1 DARLSYDTEATVAKGRSIIALYEAAGIDKSRVLIKIASTWEGIKACEILQKEGITCNMTLLFCLAQAVACAEAGATLISPFVGRITDWYKADTGRSGYSPEEDPGCLSVSEIYGYYKKHGHPTIVMGASFRNKGQILQLAGCDRLTIAPKFLEELKAGTATVERVLEPEKASKAYLGGRYPADLKSFRLKLNEDAMATEKLAEGIASFSQAIVKVEKIITDKI 669
            DARLS+D   T+ + R II LY+ AGI K R+LIKIASTWEGI+AC+ LQKEGI CNMTLLF  +QA ACAEAGATLISPFVGRI DW+KA TGRS Y+  EDPG +SV++IY YYKK+G+ TIVMGASFRN G++L LAGCDRLTI+P FLEEL    + V RVL+ E A+K Y G +   + K FR  LN+DAMATEKLAEGI  FS  IVK+E+II  K+
Sbjct:  110 DARLSFDKVGTIERARRIIKLYDDAGIGKDRILIKIASTWEGIQACKELQKEGIHCNMTLLFGFSQAAACAEAGATLISPFVGRILDWHKAKTGRSEYAFHEDPGVVSVTKIYQYYKKYGYDTIVMGASFRNTGEVLALAGCDRLTISPAFLEELSKTVSEVPRVLDAESAAKEYCGEKVSFNEKEFRRALNDDAMATEKLAEGIRGFSADIVKLEEIIRAKL 332
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig175.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVZ8_ECTSI2.680e-13991.67Transaldolase n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A6H5KHP6_9PHAE1.100e-13884.96Transaldolase n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
A0A8K1CJ33_PYTOL1.790e-9968.16Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A484E7C0_BRELC9.920e-9765.78Transaldolase n=1 Tax=Bremia lactucae TaxID=4779 R... [more]
A0A662XW57_9STRA9.920e-9764.89Transaldolase n=2 Tax=Nothophytophthora sp. Chile5... [more]
H3G883_PHYRM4.010e-9665.33Transaldolase n=20 Tax=Peronosporaceae TaxID=4777 ... [more]
A0A7S1DAK2_CYCTE5.250e-9463.23Transaldolase n=1 Tax=Cyclophora tenuis TaxID=2168... [more]
A0A0P1AH91_PLAHL7.520e-9465.02Transaldolase n=1 Tax=Plasmopara halstedii TaxID=4... [more]
A0A3R7G829_9STRA2.520e-9365.78Transaldolase n=4 Tax=Phytophthora kernoviae TaxID... [more]
F0W3G4_9STRA2.850e-9365.47Transaldolase n=2 Tax=Albugo TaxID=65356 RepID=F0W... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig175contigP-littoralis_Contig175:3..1970 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FVZ8
Preferred nameTALDO1
PFAMsTAL_FSA
Model size690
Max annot lvl2759|Eukaryota
KEGG rclassRC00439,RC00604
KEGG koko:K00616
KEGG ReactionR01827
KEGG Pathwayko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230
KEGG ModuleM00004,M00007
Hectar predicted targeting categoryother localisation
GOsGO:0001300,GO:0003674,GO:0003824,GO:0004801,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0005997,GO:0005999,GO:0006002,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0007154,GO:0007165,GO:0007166,GO:0007568,GO:0007569,GO:0008150,GO:0008152,GO:0009052,GO:0009058,GO:0009117,GO:0009987,GO:0010033,GO:0016051,GO:0016740,GO:0016744,GO:0019221,GO:0019321,GO:0019322,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0023052,GO:0030246,GO:0031974,GO:0031981,GO:0032502,GO:0033554,GO:0034097,GO:0034599,GO:0034641,GO:0035722,GO:0036094,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046364,GO:0046483,GO:0046496,GO:0048029,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051156,GO:0051186,GO:0051716,GO:0055086,GO:0065007,GO:0070013,GO:0070671,GO:0070887,GO:0071310,GO:0071345,GO:0071349,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564,GO:1901576
Exons5
Evalue4.39e-140
EggNOG OGsCOG0176@1|root,KOG2772@2759|Eukaryota
EC2.2.1.2
Descriptionsedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity
Cds size690
COG categoryG
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789841.0568857-CDS-P-littoralis_Contig175:2..781680789841.0568857-CDS-P-littoralis_Contig175:2..78Pylaiella littoralis U1_48CDSP-littoralis_Contig175 3..78 +
1680789841.0757558-CDS-P-littoralis_Contig175:461..5831680789841.0757558-CDS-P-littoralis_Contig175:461..583Pylaiella littoralis U1_48CDSP-littoralis_Contig175 462..583 +
1680789841.085129-CDS-P-littoralis_Contig175:927..11881680789841.085129-CDS-P-littoralis_Contig175:927..1188Pylaiella littoralis U1_48CDSP-littoralis_Contig175 928..1188 +
1680789841.1034272-CDS-P-littoralis_Contig175:1502..15971680789841.1034272-CDS-P-littoralis_Contig175:1502..1597Pylaiella littoralis U1_48CDSP-littoralis_Contig175 1503..1597 +
1680789841.1157832-CDS-P-littoralis_Contig175:1834..19701680789841.1157832-CDS-P-littoralis_Contig175:1834..1970Pylaiella littoralis U1_48CDSP-littoralis_Contig175 1835..1970 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig175.1.1prot_P-littoralis_Contig175.1.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig175 3..1970 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig175.1.1

>prot_P-littoralis_Contig175.1.1 ID=prot_P-littoralis_Contig175.1.1|Name=mRNA_P-littoralis_Contig175.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=230bp
DARLSYDTEATVAKGRSIIALYEAAGIDKSRVLIKIASTWEGIKACEILQ
KEGITCNMTLLFCLAQAVACAEAGATLISPFVGRITDWYKADTGRSGYSP
EEDPGCLSVSEIYGYYKKHGHPTIVMGASFRNKGQILQLAGCDRLTIAPK
FLEELKAGTATVERVLEPEKASKAYLGGRYPADLKSFRLKLNEDAMATEK
LAEGIASFSQAIVKVEKIITDKIEAASSK*
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mRNA from alignment at P-littoralis_Contig175:3..1970+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig175.1.1 ID=mRNA_P-littoralis_Contig175.1.1|Name=mRNA_P-littoralis_Contig175.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1968bp|location=Sequence derived from alignment at P-littoralis_Contig175:3..1970+ (Pylaiella littoralis U1_48)
GACGCGAGGCTGAGCTACGACACCGAGGCCACGGTGGCGAAGGGGCGGAG
CATCATCGCCCTGTACGAGGCCGCAGGTGACACACACATATGGAAAGAGG
GGGGCGGGCGGTGGGCGGTGGGTGGAAGTGCGGGAGGGAGTGGGGGTGGT
GGGGGAAAAAACGGGTAGACGAAGTTTCAGTCCGTGAGGGGCTACCCGTC
AAGAGTTTCCCTTGATGTTTTGAAGATTTTTGTCTAACATCGATATGAAA
CACGGAAGAGGTTGTAAGCATGCATTGACGCAAAAGTGTGGCGGTCCAAA
ACACACCATTCGAGAATTGGAACGGACCCTTGGTTTCCTCTCGTAAAAGG
GATGCTCGTACAGTAGCTCGTGTTTTCCTTCGCGTCCTTGAGCTGTGTAC
CGAACGCCCCGCGTGCGCACGATACACACTGCCGTCCCCGCCGAAAAACT
CCCCAACAGGCATCGACAAGTCTCGCGTTCTGATCAAGATCGCCAGCACG
TGGGAGGGCATCAAGGCGTGCGAGATCCTGCAGAAGGAGGGCATCACCTG
CAACATGACTCTGCTCTTCTGTCTTGCGCAGGTAGATGAAACCTCTACCA
AACATATTTACTTGGTCTCTATTTTTTTCGTTCAATTCTTATCCATATAG
ATTTGCTGCTGCTGCTGCTGCTGCCGCTTCTGATGTGTAGTGGTATGGAA
ATAACCCCCCCTCGTACCCTCGACGTAATCAATAACGCCCTCGGGCAAAG
GATAAGCTCTTTCCGCACACATTGCCTCGCTTCTTGTGTCTGTGAACATG
CCATCATAAAATCACGTACCTCGTTTATGCGCCGCGCACACACGCGCACC
CCCTCTTTCCATCAAAATGCACCGCATTTTTTCATGCCCCGGATTCCCCC
CCACCACGCGTTACGGCCTGTGCAGGCGGTGGCATGCGCCGAAGCAGGAG
CAACCCTCATCTCCCCCTTCGTGGGACGCATCACGGACTGGTACAAGGCG
GACACCGGTCGATCGGGGTACTCCCCCGAGGAGGACCCCGGCTGCCTCAG
CGTGTCCGAGATCTACGGGTACTACAAGAAGCACGGACACCCCACGATCG
TCATGGGAGCGAGCTTCCGAAACAAGGGGCAGATCCTCCAGCTGGCGGGC
TGCGACCGGCTCACCATCGCGCCGAAGTTCCTCGAGGTGAGCAGTCGTTC
GCTCCGTGTTATGGGTACGGTACGGAATGTAGCGCGGCCACGCTACAGAT
GGGCTATTTTTTGCAATGTACAGCAGTCGTACGCGCGTATCCGTACATAC
CGCAGCAATACTCACAAATGTGATTTCATACGACAGGCATGTATGTACCA
GTGGCTCGCCAGGACGCAAGAATAGCGAATCAAGGCCGGGTGCGCGCGCA
GTCACTCGTGAGCCCCCCCACCCCCATTCCCACCCCCACCCCCCATAGTT
CCAAACCCCGGGTCCCCCTATTGATGATGCGTCCTTTTTTGTTTTTATAG
GAGCTCAAGGCCGGAACGGCGACGGTGGAGCGTGTGCTGGAGCCTGAGAA
GGCTTCCAAGGCCTACCTCGGGGGCCGCTACCCAGCGGACTTGAAGTGAG
TTCGGAACGATCCATTCCACACGTCGTTGTTGGGATAATTCGACTCCTTG
CACAGGTCGTTCCTTCTTAAAATGATCAGGAGGGCATTCATTTACCCCAA
ACTTCCAAAACTAGGGCGGTATCGAACAGCTGCATACCAAAGGGAAGAAA
ACGGGAGGGTTGTTGGGGGTGATTTGACGGGCATTGTTTTTTTCTTGCTC
TAAACGCCTATTATTTCCGCTTCACAACACAGGTCGTTCCGGCTGAAGCT
TAACGAGGACGCCATGGCGACGGAGAAGCTGGCCGAGGGTATCGCTTCCT
TCTCCCAGGCCATCGTCAAGGTGGAGAAGATCATCACCGACAAGATCGAA
GCGGCGTCGTCGAAGTAA
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Coding sequence (CDS) from alignment at P-littoralis_Contig175:3..1970+

>mRNA_P-littoralis_Contig175.1.1 ID=mRNA_P-littoralis_Contig175.1.1|Name=mRNA_P-littoralis_Contig175.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=690bp|location=Sequence derived from alignment at P-littoralis_Contig175:3..1970+ (Pylaiella littoralis U1_48)
GACGCGAGGCTGAGCTACGACACCGAGGCCACGGTGGCGAAGGGGCGGAG
CATCATCGCCCTGTACGAGGCCGCAGGCATCGACAAGTCTCGCGTTCTGA
TCAAGATCGCCAGCACGTGGGAGGGCATCAAGGCGTGCGAGATCCTGCAG
AAGGAGGGCATCACCTGCAACATGACTCTGCTCTTCTGTCTTGCGCAGGC
GGTGGCATGCGCCGAAGCAGGAGCAACCCTCATCTCCCCCTTCGTGGGAC
GCATCACGGACTGGTACAAGGCGGACACCGGTCGATCGGGGTACTCCCCC
GAGGAGGACCCCGGCTGCCTCAGCGTGTCCGAGATCTACGGGTACTACAA
GAAGCACGGACACCCCACGATCGTCATGGGAGCGAGCTTCCGAAACAAGG
GGCAGATCCTCCAGCTGGCGGGCTGCGACCGGCTCACCATCGCGCCGAAG
TTCCTCGAGGAGCTCAAGGCCGGAACGGCGACGGTGGAGCGTGTGCTGGA
GCCTGAGAAGGCTTCCAAGGCCTACCTCGGGGGCCGCTACCCAGCGGACT
TGAAGTCGTTCCGGCTGAAGCTTAACGAGGACGCCATGGCGACGGAGAAG
CTGGCCGAGGGTATCGCTTCCTTCTCCCAGGCCATCGTCAAGGTGGAGAA
GATCATCACCGACAAGATCGAAGCGGCGTCGTCGAAGTAA
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