prot_P-littoralis_Contig174.78.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig174.78.2
Unique Nameprot_P-littoralis_Contig174.78.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length117
Homology
BLAST of mRNA_P-littoralis_Contig174.78.2 vs. uniprot
Match: D7FYS9_ECTSI (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYS9_ECTSI)

HSP 1 Score: 201 bits (511), Expect = 5.560e-65
Identity = 102/116 (87.93%), Postives = 111/116 (95.69%), Query Frame = 0
Query:    1 MATPVGSGPVVQDVAPKGGFPKIQISRQLPAGRGPRGSVVLGLVTLTMAVGYYKLGQANKGRRAEKHEKRMARIALMPMLQAEEDRKAVLTKRFNMQLQRALHESLDTWKEEEELN 116
            MATPVG+GP+VQDVAPKGGFPK+QISRQLP+GRGPRGSVVLGLVT+TMAVGYYKLGQANK RRAE+HEKR+ARIALMPMLQAEEDRKAVL KRFN QLQ+ LHESL+ WKEEEELN
Sbjct:    1 MATPVGTGPIVQDVAPKGGFPKVQISRQLPSGRGPRGSVVLGLVTVTMAVGYYKLGQANKARRAEQHEKRLARIALMPMLQAEEDRKAVLAKRFNAQLQKGLHESLNAWKEEEELN 116          
BLAST of mRNA_P-littoralis_Contig174.78.2 vs. uniprot
Match: A0A061QUA6_9CHLO (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QUA6_9CHLO)

HSP 1 Score: 81.3 bits (199), Expect = 3.080e-17
Identity = 43/102 (42.16%), Postives = 68/102 (66.67%), Query Frame = 0
Query:    9 PVVQDVAPKGGFPKIQISRQLPAGRGPRGSVVLGLVTLTMAVGYYKLGQANKGRRAEKHEKRMARIALMPMLQAEEDRKAVLTKRFNMQLQRALHESLDTWK 110
            PV+QD  P GGFP I+I+R++P   GP G+ + G+  L M+ G+Y +GQ N  RRA+K E+   R AL+P LQAEEDR+ +  K+  ++ + ++ + +D W+
Sbjct:   19 PVLQDGPPPGGFPSIRIARRIP-NTGPSGAAIFGVGALVMSYGFYLVGQTNIQRRADKAEREHVRRALVPFLQAEEDRRYLKAKKQLLEKEASIMKDVDGWE 119          
BLAST of mRNA_P-littoralis_Contig174.78.2 vs. uniprot
Match: A0A5J4XG14_9CHLO (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XG14_9CHLO)

HSP 1 Score: 77.0 bits (188), Expect = 1.380e-15
Identity = 44/107 (41.12%), Postives = 68/107 (63.55%), Query Frame = 0
Query:    9 PVVQDVAPKGGFPKIQISRQLPAGRGPRGSVVLGLVTLTMAVGYYKLGQANKGRRAEKHEKRMARIALMPMLQAEEDRKAVLTKRFNMQLQRALHESLDTWKEEEEL 115
            PV+QD  P GGFP ++ +R++P+  GP G  +  +    MA G+ K+GQ N  RRA K EK+ AR A+MP+LQAEEDR+ V      ++ ++ L +++  +K  E+L
Sbjct:   19 PVLQDGPPPGGFPSVRYARRIPS-TGPAGFTLFAVTASIMAYGFIKVGQTNHERRAAKAEKKAARFAIMPILQAEEDRRYVQANEAFIRKEKELMKNVPGYKAGEQL 124          
BLAST of mRNA_P-littoralis_Contig174.78.2 vs. uniprot
Match: A0A087SFV8_AUXPR (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SFV8_AUXPR)

HSP 1 Score: 74.3 bits (181), Expect = 1.510e-14
Identity = 45/105 (42.86%), Postives = 64/105 (60.95%), Query Frame = 0
Query:    9 PVVQDVAPKGGFPKIQISRQLPAGRGPRGSVVLGLVTLTMAVGYYKLGQANKGRRAEKHEKRMARIALMPMLQAEEDRKAVLTKRFNMQLQRALHESLDTWKEEE 113
            P+VQD  P GGFP ++ +R+LP   GP G  + G+    MA G+Y++GQ N  RR EK EK  +R AL+P LQAEEDR+ V       + Q+ + ++   +K EE
Sbjct:   19 PIVQDGPPPGGFPAVRYARRLP-NSGPAGFTLFGVGAAVMAYGFYQVGQGNIKRRDEKREKLDSRRALVPFLQAEEDRRWVAANEEFQKKQKEIMKNHPEYKAEE 122          
BLAST of mRNA_P-littoralis_Contig174.78.2 vs. uniprot
Match: A0A2P6U3A2_CHLSO (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U3A2_CHLSO)

HSP 1 Score: 73.9 bits (180), Expect = 2.140e-14
Identity = 41/81 (50.62%), Postives = 55/81 (67.90%), Query Frame = 0
Query:    9 PVVQDVAPKGGFPKIQISRQLPAGRGPRGSVVLGLVTLTMAVGYYKLGQANKGRRAEKHEKRMARIALMPMLQAEEDRKAV 89
            P+VQD  P GGFP I+ +R++P+  GP G  +  +    MA G+YK+GQ+N+ RR EK E   AR AL+P LQAEEDR+ V
Sbjct:   19 PIVQDGPPPGGFPAIRYARRVPS-TGPSGFTLFAVGAAVMAYGFYKVGQSNRQRRGEKAEHFGARAALVPFLQAEEDRRWV 98          
BLAST of mRNA_P-littoralis_Contig174.78.2 vs. uniprot
Match: A0A2P6VLY9_9CHLO (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=2 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VLY9_9CHLO)

HSP 1 Score: 72.0 bits (175), Expect = 1.140e-13
Identity = 40/81 (49.38%), Postives = 53/81 (65.43%), Query Frame = 0
Query:    9 PVVQDVAPKGGFPKIQISRQLPAGRGPRGSVVLGLVTLTMAVGYYKLGQANKGRRAEKHEKRMARIALMPMLQAEEDRKAV 89
            PVVQD  P GGFP  + +R++P+  GP G  +       MA G+YK+GQ+N+ RRA+K     AR AL+P LQAEEDR+ V
Sbjct:   19 PVVQDGPPPGGFPSFRYARRVPS-TGPSGITLFAAGAAVMAFGFYKVGQSNRERRAQKAANLAARAALVPFLQAEEDRRWV 98          
BLAST of mRNA_P-littoralis_Contig174.78.2 vs. uniprot
Match: A0A7S3CKE5_9SPIT (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Fragment) n=1 Tax=Strombidium rassoulzadegani TaxID=1082188 RepID=A0A7S3CKE5_9SPIT)

HSP 1 Score: 72.0 bits (175), Expect = 1.250e-13
Identity = 38/84 (45.24%), Postives = 58/84 (69.05%), Query Frame = 0
Query:   10 VVQDVAPKGGFPKIQISRQLPAGRGPRGSVVLGLVTLTMAVGYYKLGQANKGRRAEKHEKRMARIALMPMLQAEEDRKAVLTKR 93
            ++QD  P GGFP ++I+R++P   GP G+ V G+  L ++ G+Y +GQ N  +RA++ EK   R AL+P+LQAEEDR+ V  K+
Sbjct:   22 LLQDGPPAGGFPSVRIARRIP-NTGPSGAAVFGVGALVISYGFYIVGQTNIQKRADRAEKEAVRRALVPVLQAEEDRRFVAAKK 104          
BLAST of mRNA_P-littoralis_Contig174.78.2 vs. uniprot
Match: A0A388KNK5_CHABU (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KNK5_CHABU)

HSP 1 Score: 70.5 bits (171), Expect = 4.850e-13
Identity = 39/102 (38.24%), Postives = 63/102 (61.76%), Query Frame = 0
Query:    9 PVVQDVAPKGGFPKIQISRQLPAGRGPRGSVVLGLVTLTMAVGYYKLGQANKGRRAEKHEKRMARIALMPMLQAEEDRKAVLTKRFNMQLQRALHESLDTWK 110
            PV+QD  P GGFP I+ +R++P   GP G VV  +    ++ G Y++GQ N  RRA K EK  AR+A++P++QAEED +    ++  +  +  + +++  WK
Sbjct:   19 PVLQDGPPPGGFPAIRYARKIP-NTGPSGVVVFSIAAAVISYGMYQVGQGNLHRRALKKEKMEARMAILPLIQAEEDVRYAKARQKALAEEEKIMQNVPGWK 119          
BLAST of mRNA_P-littoralis_Contig174.78.2 vs. uniprot
Match: F0YB35_AURAN (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YB35_AURAN)

HSP 1 Score: 68.9 bits (167), Expect = 1.790e-12
Identity = 40/83 (48.19%), Postives = 55/83 (66.27%), Query Frame = 0
Query:   10 VVQDVAPKGGFPKIQISRQLPAGRGPRGSVVLGLVTLTMAVGYYKLGQANKGRRAEKHEKRMARIALMPMLQAEEDRKAVLTK 92
            VVQD+ P GG+P + I ++    RGP G ++     LT+A G+Y++GQ N  R A K EKR AR+A++P LQAEED +AV  K
Sbjct:   18 VVQDMPPAGGYPDV-IFKKATINRGPDGWMIWVGSLLTVAFGFYRVGQCNLERNAAKKEKREARMAIVPYLQAEEDARAVAAK 99          
BLAST of mRNA_P-littoralis_Contig174.78.2 vs. uniprot
Match: A0A0L0T5M2_ALLM3 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0T5M2_ALLM3)

HSP 1 Score: 64.3 bits (155), Expect = 9.700e-11
Identity = 39/102 (38.24%), Postives = 59/102 (57.84%), Query Frame = 0
Query:    9 PVVQDVAPKGGFPKIQISRQLPAGRGPRGSVVLGLVTLTMAVGYYKLGQANKGRRAEKHEKRMARIALMPMLQAEEDRKAVLTKRFNMQLQRALHESLDTWK 110
            P VQD+ P+GGF ++Q  R +PA RGP G+ +   +T  +A G+Y   Q  + RR  + E+  ARI L+PMLQAE+DR          +++R   + +  WK
Sbjct:    7 PYVQDMPPQGGFARVQYKRNIPA-RGPSGAALFAGLTAIVAYGWYWNIQGIRERREIRREQTWARIHLVPMLQAEQDRHEARMLAQQEEIERKAMKDVPGWK 107          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig174.78.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYS9_ECTSI5.560e-6587.93NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A061QUA6_9CHLO3.080e-1742.16NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A5J4XG14_9CHLO1.380e-1541.12NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A087SFV8_AUXPR1.510e-1442.86NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A2P6U3A2_CHLSO2.140e-1450.62NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A2P6VLY9_9CHLO1.140e-1349.38NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A7S3CKE5_9SPIT1.250e-1345.24NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A388KNK5_CHABU4.850e-1338.24NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
F0YB35_AURAN1.790e-1248.19NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A0L0T5M2_ALLM39.700e-1138.24NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009346GRIM-19PFAMPF06212GRIM-19coord: 10..110
e-value: 4.4E-21
score: 75.2
IPR009346GRIM-19PANTHERPTHR12966NADH DEHYDROGENASE UBIQUINONE 1 ALPHA SUBCOMPLEX SUBUNIT 13coord: 8..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig174contigP-littoralis_Contig174:288064..296988 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig174.78.2mRNA_P-littoralis_Contig174.78.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig174 287150..296988 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig174.78.2 ID=prot_P-littoralis_Contig174.78.2|Name=mRNA_P-littoralis_Contig174.78.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=117bp
MATPVGSGPVVQDVAPKGGFPKIQISRQLPAGRGPRGSVVLGLVTLTMAV
GYYKLGQANKGRRAEKHEKRMARIALMPMLQAEEDRKAVLTKRFNMQLQR
ALHESLDTWKEEEELN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009346GRIM-19