mRNA_P-littoralis_Contig174.47.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig174.47.1 vs. uniprot
Match: D7FYS6_ECTSI (Elongation of fatty acids protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYS6_ECTSI) HSP 1 Score: 402 bits (1034), Expect = 6.680e-137 Identity = 188/213 (88.26%), Postives = 202/213 (94.84%), Query Frame = 3
Query: 63 MVAVGPMIMSGLSPIDSYPVRFVYNVVQIILCSYMCVEAFMLANRNGYPILPCAPYDAENPPVANLLWLFYVSKILDFMDTVFIVLKKSWRQLSFLHYYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMVQFVCMTTQAFYLLGTGCTTYPRRIVIVYAAYIMSLLFLFAQFYVNSYSKKPISK 701
MV VGP +M+ +SPIDSYPVRFVYNVVQIILCSYMCVEAFM+A RNGYP+LPCAP+DAENPP ANLLWLFYVSK+LDFMDT+FIVLKKSWRQLSFLH YHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQM+QFVCMTTQA YLL TGCT+YP RIV+VYA YI+SLLFLFAQFYVNSY+KKP +K
Sbjct: 1 MVTVGPKVMADMSPIDSYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAENPPAANLLWLFYVSKVLDFMDTIFIVLKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTTQALYLLTTGCTSYPPRIVVVYAGYILSLLFLFAQFYVNSYTKKPTAK 213
BLAST of mRNA_P-littoralis_Contig174.47.1 vs. uniprot
Match: A0A835Z8H5_9STRA (Elongation of fatty acids protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8H5_9STRA) HSP 1 Score: 323 bits (828), Expect = 6.930e-105 Identity = 152/234 (64.96%), Postives = 181/234 (77.35%), Query Frame = 3
Query: 9 WFLTDFATALAIVGLYLVMVAVGPMIMSGLSPIDS--YPVRFVYNVVQIILCSYMCVEAFMLANRNGYPILPCAPYDAENPPVANLLWLFYVSKILDFMDTVFIVLKKSWRQLSFLHYYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMVQFVCMTTQAFYLLGTGCTTYPRRIVIVYAAYIMSLLFLFAQFYVNSYSKKPISKK 704
W + DF +A+ +V YL + VG +M + P+D+ YP RF+YN+VQI+LCSYMC+EA ++A+RN Y ILPC P++ +NPPV N+LWLFY+SKILDF DTVFIVL+K W+QLSFLH YHH TIFLFYWLN+N GYDGD+YLTIVLNGFIHTVMYTYYFVSMHT IWWK LT MQMVQFV M +QA YLL TGCTTYP R+ Y YI SLL LF F++ SY K KK
Sbjct: 33 WPMADFYSAVMVVAAYLGFIFVGSFVMKFVQPLDAPTYPFRFIYNIVQIMLCSYMCLEAGIIAHRNNYGILPCVPFNVQNPPVGNVLWLFYISKILDFADTVFIVLRKKWKQLSFLHVYHHTTIFLFYWLNINVGYDGDIYLTIVLNGFIHTVMYTYYFVSMHTDKIWWKSSLTAMQMVQFVTMISQALYLLTTGCTTYPPRVTQAYCLYIFSLLILFGNFFIKSYMPKQGGKK 266
BLAST of mRNA_P-littoralis_Contig174.47.1 vs. uniprot
Match: L1IAX0_GUITC (Elongation of fatty acids protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IAX0_GUITC) HSP 1 Score: 319 bits (817), Expect = 3.610e-103 Identity = 149/236 (63.14%), Postives = 185/236 (78.39%), Query Frame = 3
Query: 3 QGWFLTDFATALAIVGLYLVMVAVGPMIMSGLSPID--SYPVRFVYNVVQIILCSYMCVEAFMLANRNGYPILPCAPYDAENPPVANLLWLFYVSKILDFMDTVFIVLKKSWRQLSFLHYYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMVQFVCMTTQAFYLLGTGCTTYPRRIVIVYAAYIMSLLFLFAQFYVNSYSKKPISKK 704
QGWFLTDFA+A AI +Y +V VG ++M +D +YP+RFVYN++Q++LCSYM +EA +LA R+ Y ++PC P+ ENPP+A +LWLFY+SK+LDFMDT FIVL K W QLSFLH YHH TIF+ YW+NVN GYDGD+YLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLT+MQM+QF+ M QA +LL + C T+PR++ +Y YIMSL LF F++ SY P SKK
Sbjct: 38 QGWFLTDFASAFAISAIYFALVIVGRIVMIPFRSLDKLTYPIRFVYNILQVMLCSYMTLEAGILAYRHNYNLVPCNPFKTENPPIAPVLWLFYISKVLDFMDTFFIVLGKKWEQLSFLHVYHHLTIFMIYWMNVNVGYDGDIYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTMMQMIQFITMNGQAIWLLQSNCQTFPRKVTQLYLVYIMSLFALFLNFFIRSYVS-PKSKK 272
BLAST of mRNA_P-littoralis_Contig174.47.1 vs. uniprot
Match: A0A7R9WGN6_9STRA (Elongation of fatty acids protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WGN6_9STRA) HSP 1 Score: 317 bits (812), Expect = 1.780e-102 Identity = 152/237 (64.14%), Postives = 182/237 (76.79%), Query Frame = 3
Query: 3 QGWFLTDFATALAIVGLYLVMVAVGPMIM-SGLSPIDSYPVRFVYNVVQIILCSYMCVEAFMLANRNGYPILPCAPYDAENPPVANLLWLFYVSKILDFMDTVFIVLKKSWRQLSFLHYYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKD--------IWWKKYLTLMQMVQFVCMTTQAFYLLGTGCTTYPRRIVIVYAAYIMSLLFLFAQFYVNSYSK 686
+GWFLTDF++A + Y+ V +G +M SG++ +D YP++F+YNV QI+LC+YM +EAF+LA RNGY LPC D ENPP+ANLLWLFY+SK+ DF DTVFIV+ K WRQLSFLH YHH TIFLFYWLN + YDGD+YLTI+LNGFIHTVMYTYYF+ MHTKD IWWK YLTLMQM+QFV M +QA YLLGT C R+V VY YI+SL FLFAQFYV SY+K
Sbjct: 30 EGWFLTDFSSAGTVALAYVAFVVIGSAVMKSGVAAMDPYPIKFIYNVSQIMLCAYMTIEAFLLAYRNGYTCLPCNNVDTENPPLANLLWLFYISKVWDFWDTVFIVIGKKWRQLSFLHVYHHTTIFLFYWLNSHVNYDGDIYLTILLNGFIHTVMYTYYFICMHTKDPKTGKSLPIWWKSYLTLMQMIQFVTMMSQATYLLGTQCEKTSLRVVFVYLVYILSLFFLFAQFYVQSYTK 266
BLAST of mRNA_P-littoralis_Contig174.47.1 vs. uniprot
Match: A0A6U1Q8V8_9STRA (Elongation of fatty acids protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1Q8V8_9STRA) HSP 1 Score: 315 bits (807), Expect = 1.470e-101 Identity = 151/231 (65.37%), Postives = 183/231 (79.22%), Query Frame = 3
Query: 3 QGWFLTDFATALAIVGLYLVMVAVGPMI--MSGLSPIDSYPVRFVYNVVQIILCSYMCVEAFMLANRNGYPILPCAPYDAENPPVANLLWLFYVSKILDFMDTVFIVLKKSWRQLSFLHYYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMVQFVCMTTQAFYLLGTGCTTYPRRIVIVYAAYIMSLLFLFAQFYVNSYSKK 689
+GW LTD +AL I G YL+ V VG M+ + + I YPV+F+YN+VQ++LCSYM +EA M+A R GY LPC P++A+NPPVA +L++FY+SKILDFMDT FI++ K W+QLSFLH YHH +IFLFYWLN+N GYDGDVYLTIVLNGFIHTVMYTYYFVS+HTKDIWWK LT+ QM+QFV M QA YLL TGC +YP RIV+ Y YI+SLL LFA F+V SY KK
Sbjct: 40 KGWPLTDLESALTIAGAYLLFVLVGSMLFKVEAVPAIKLYPVQFLYNIVQVMLCSYMAIEAGMVAFRQGYTCLPCEPFNAKNPPVAEVLYIFYLSKILDFMDTFFIIIGKKWKQLSFLHVYHHTSIFLFYWLNINVGYDGDVYLTIVLNGFIHTVMYTYYFVSLHTKDIWWKSSLTMCQMIQFVTMNAQAGYLLLTGCKSYPPRIVLSYLVYILSLLVLFANFFVQSYLKK 270
BLAST of mRNA_P-littoralis_Contig174.47.1 vs. uniprot
Match: A0A7S4JGP6_9STRA (Elongation of fatty acids protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JGP6_9STRA) HSP 1 Score: 313 bits (803), Expect = 4.180e-101 Identity = 153/242 (63.22%), Postives = 182/242 (75.21%), Query Frame = 3
Query: 3 QGWFLTDFATALAIVGLYLVMVAVGPMIM-SGLSPIDSYPVRFVYNVVQIILCSYMCVEAFMLANRNGYPILPCAPYDAENPPVANLLWLFYVSKILDFMDTVFIVLKKSWRQLSFLHYYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKD--------IWWKKYLTLMQMVQFVCMTTQAFYLLGTGCTTYPRRIVIVYAAYIMSLLFLFAQFYVNSYSKKPISK 701
+GWFLTDF TA +I Y+ V +G +M SG++ +D YP++F YNV QI+LC+YM +E F+LA RNGY LPC D +NPP+ANLLWLFYVSK+ DF DT+FIVL K WRQLSFLH YHH TIFLFYWLN + +DGD+YLTIVLNGFIHTVMYTYYF+ MHTKD IWWK LTLMQ++QF+ M +QA YLL TGC R+V VY YI+SL FLFAQFYV SY+KKP K
Sbjct: 30 EGWFLTDFRTAGSIALAYVAFVVIGSAVMKSGVAAMDPYPIKFFYNVSQIMLCAYMTIEGFLLAYRNGYTCLPCIDIDTKNPPLANLLWLFYVSKVWDFWDTIFIVLGKKWRQLSFLHVYHHTTIFLFYWLNAHVNFDGDIYLTIVLNGFIHTVMYTYYFICMHTKDPKTGKSLPIWWKSSLTLMQLIQFITMMSQATYLLVTGCQKTGLRVVSVYFVYILSLFFLFAQFYVASYTKKPKKK 271
BLAST of mRNA_P-littoralis_Contig174.47.1 vs. uniprot
Match: A0A7R9ZKR5_9STRA (Elongation of fatty acids protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZKR5_9STRA) HSP 1 Score: 304 bits (779), Expect = 1.830e-97 Identity = 147/243 (60.49%), Postives = 177/243 (72.84%), Query Frame = 3
Query: 3 QGWFLTDFATALAIVGLYLVMVAVGPMIMSGLSPIDSYPVRFVYNVVQIILCSYMCVEAFMLANRNGYPILPCAPYDAENPPVANLLWLFYVSKILDFMDTVFIVLKKSWRQLSFLHYYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKD--------IWWKKYLTLMQMVQFVCMTTQAFYLLGTGCTTYPRRIVIVYAAYIMSLLFLFAQFYVNSYSKKPISKKT 707
+GWFLTDF++A I Y++ VA+G +M+ L ID YP++F+YNV QI+LC+YM +E LA RN Y ILPC PY+ +P + NLLWLFY+SK+ DF DT+FIVL K WRQLSFLH YHH TIFLFYWLN N YDGD++LTIVLNGFIHTVMYTYYF+ MHTKD IWWK YLT+MQMVQFV M +Q YL+ + C R+ Y YI+SL FLFAQFYV SY K +KKT
Sbjct: 30 EGWFLTDFSSAFTIALAYVLFVAIGSQVMNFLPAIDPYPIKFLYNVSQIMLCAYMTLEGCFLAYRNNYTILPCEPYNQHDPAIGNLLWLFYISKVWDFWDTIFIVLGKKWRQLSFLHVYHHTTIFLFYWLNSNVFYDGDIFLTIVLNGFIHTVMYTYYFICMHTKDKSTGKSLPIWWKSYLTMMQMVQFVTMMSQGSYLVVSQCDQSSLRVSSTYVVYILSLFFLFAQFYVESYMKPKKNKKT 272
BLAST of mRNA_P-littoralis_Contig174.47.1 vs. uniprot
Match: A0A7S2UR25_9STRA (Elongation of fatty acids protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UR25_9STRA) HSP 1 Score: 300 bits (767), Expect = 1.090e-95 Identity = 147/244 (60.25%), Postives = 183/244 (75.00%), Query Frame = 3
Query: 3 QGWFLTDFATALAIVGLYLVMVAVGPMIM-SGLSPIDSYPVRFVYNVVQIILCSYMCVEAFMLANRNGYPILPCAPYDAENPPVANLLWLFYVSKILDFMDTVFIVLKKSWRQLSFLHYYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTK--------DIWWKKYLTLMQMVQFVCMTTQAFYLLGTGCTTYPRRIVIVYAAYIMSLLFLFAQFYVNSYSKKPISKKT 707
GWFLTDF +A+ I +Y+V V VG IM +G+ +D YP++FVYNV QI +C+YM VEAF++A R GY LPC +D ENPP+A+LL+LFY+SK+ DF DT+FIV+ K WRQLSFLH YHH TIFLFYWLN + YDGD+YLTI+LNGFIHTVMYTYYF+ MHTK IWWK LT+MQ++QFV M +QA YLL +GC R+ +Y YI+SL FLFAQFY++SYSK P +KT
Sbjct: 30 DGWFLTDFTSAITIAIVYVVFVVVGSAIMKAGVPAMDPYPIKFVYNVSQIFMCAYMTVEAFLIAYRAGYHALPCNNFDTENPPLAHLLYLFYLSKVWDFWDTIFIVIGKKWRQLSFLHVYHHTTIFLFYWLNSHVNYDGDIYLTILLNGFIHTVMYTYYFICMHTKVPETGKSLPIWWKSSLTMMQLIQFVSMMSQATYLLVSGCEENTSRVTALYFVYILSLFFLFAQFYISSYSK-PKKRKT 272
BLAST of mRNA_P-littoralis_Contig174.47.1 vs. uniprot
Match: A0A1S7C7Q3_9STRA (Elongation of fatty acids protein n=1 Tax=Nannochloropsis oceanica TaxID=145522 RepID=A0A1S7C7Q3_9STRA) HSP 1 Score: 299 bits (766), Expect = 1.710e-95 Identity = 143/240 (59.58%), Postives = 173/240 (72.08%), Query Frame = 3
Query: 3 QGWFLTDFATALAIVGLYLVMVAVGPMIMSGLSPIDSYPVRFVYNVVQIILCSYMCVEAFMLANRNGYPILPCAPYDAENPPVANLLWLFYVSKILDFMDTVFIVLKKSWRQLSFLHYYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMVQFVCMTTQAFYLLGTGCTTYPRRIVIVYAAYIMSLLFLFAQFYVNSYS------KKPISKK 704
+ W L ALAI YL++V VG +M P+ Y ++F YN+ Q+ LCSYMC+EA + A RN Y LPC P++A NPP+A LLWLFYVSK+ DF DTVFI+L K W QLSFLH YHH TIFL YWLN+NAGYDGD++LT++LNG IHTVMYTYYF+SMHTKDIWWKKYLTL Q++QF+ M QA YLL GC + +I +Y YI+SLL LF FY SYS KKP+SKK
Sbjct: 36 RTWPLAGLDVALAIAAFYLIIVFVGSAMMKNAQPVKLYGLQFFYNISQVALCSYMCIEAAIQAYRNNYTFLPCEPFNATNPPIAPLLWLFYVSKVFDFADTVFIILGKKWNQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYTYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYLLCVGCKGFSPQITKLYLGYILSLLVLFLNFYFKSYSGVKPNGKKPVSKK 275
BLAST of mRNA_P-littoralis_Contig174.47.1 vs. uniprot
Match: A0A1E7FWF4_9STRA (Elongation of fatty acids protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWF4_9STRA) HSP 1 Score: 296 bits (759), Expect = 1.690e-94 Identity = 143/244 (58.61%), Postives = 176/244 (72.13%), Query Frame = 3
Query: 3 QGWFLTDFATALAIVGLYLVMVAVGPMIMSGLSPIDSYPVRFVYNVVQIILCSYMCVEAFMLANRNGYPILPCAPYDAENPPVANLLWLFYVSKILDFMDTVFIVLKKSWRQLSFLHYYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKD--------IWWKKYLTLMQMVQFVCMTTQAFYLLGTGCTTYPRRIVIVYAAYIMSLLFLFAQFYVNSYSKKPISKKTA 710
+GWFLTDF +A +I +Y++ V +G +M L ID YP++F YNV QI+LC+YM +EA +LA RNGY I+PC Y+ ++P + NLLWLFYVSK+ DF DT+FIVL K WRQLSFLH YHH TIFLFYWLN N YDGD+YLTI LNGFIHTVMYTYYF+ MHTKD IWWK LTL+Q+ QF+ M +Q YL+ GC + R+ Y YI+SL FLFAQF+V SY + P KTA
Sbjct: 30 KGWFLTDFTSAFSIALVYVLFVIIGSQVMKVLPAIDPYPIKFFYNVSQIMLCAYMTIEACLLAYRNGYTIMPCVGYNRDDPAIGNLLWLFYVSKVWDFWDTIFIVLGKKWRQLSFLHVYHHTTIFLFYWLNANVFYDGDIYLTIALNGFIHTVMYTYYFICMHTKDKKTGKSLPIWWKSSLTLLQLFQFITMMSQGLYLIIFGCESLSIRVTATYVVYILSLFFLFAQFFVASYMQ-PKKSKTA 272 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig174.47.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig174.47.1 >prot_P-littoralis_Contig174.47.1 ID=prot_P-littoralis_Contig174.47.1|Name=mRNA_P-littoralis_Contig174.47.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=217bp MVAVGPMIMSGLSPIDSYPVRFVYNVVQIILCSYMCVEAFMLANRNGYPIback to top mRNA from alignment at P-littoralis_Contig174:212910..217054- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig174.47.1 ID=mRNA_P-littoralis_Contig174.47.1|Name=mRNA_P-littoralis_Contig174.47.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4145bp|location=Sequence derived from alignment at P-littoralis_Contig174:212910..217054- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig174:212910..217054- >mRNA_P-littoralis_Contig174.47.1 ID=mRNA_P-littoralis_Contig174.47.1|Name=mRNA_P-littoralis_Contig174.47.1|organism=Pylaiella littoralis U1_48|type=CDS|length=651bp|location=Sequence derived from alignment at P-littoralis_Contig174:212910..217054- (Pylaiella littoralis U1_48)back to top |