mRNA_P-littoralis_Contig174.47.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig174.47.1
Unique NamemRNA_P-littoralis_Contig174.47.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig174.47.1 vs. uniprot
Match: D7FYS6_ECTSI (Elongation of fatty acids protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYS6_ECTSI)

HSP 1 Score: 402 bits (1034), Expect = 6.680e-137
Identity = 188/213 (88.26%), Postives = 202/213 (94.84%), Query Frame = 3
Query:   63 MVAVGPMIMSGLSPIDSYPVRFVYNVVQIILCSYMCVEAFMLANRNGYPILPCAPYDAENPPVANLLWLFYVSKILDFMDTVFIVLKKSWRQLSFLHYYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMVQFVCMTTQAFYLLGTGCTTYPRRIVIVYAAYIMSLLFLFAQFYVNSYSKKPISK 701
            MV VGP +M+ +SPIDSYPVRFVYNVVQIILCSYMCVEAFM+A RNGYP+LPCAP+DAENPP ANLLWLFYVSK+LDFMDT+FIVLKKSWRQLSFLH YHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQM+QFVCMTTQA YLL TGCT+YP RIV+VYA YI+SLLFLFAQFYVNSY+KKP +K
Sbjct:    1 MVTVGPKVMADMSPIDSYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAENPPAANLLWLFYVSKVLDFMDTIFIVLKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTTQALYLLTTGCTSYPPRIVVVYAGYILSLLFLFAQFYVNSYTKKPTAK 213          
BLAST of mRNA_P-littoralis_Contig174.47.1 vs. uniprot
Match: A0A835Z8H5_9STRA (Elongation of fatty acids protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8H5_9STRA)

HSP 1 Score: 323 bits (828), Expect = 6.930e-105
Identity = 152/234 (64.96%), Postives = 181/234 (77.35%), Query Frame = 3
Query:    9 WFLTDFATALAIVGLYLVMVAVGPMIMSGLSPIDS--YPVRFVYNVVQIILCSYMCVEAFMLANRNGYPILPCAPYDAENPPVANLLWLFYVSKILDFMDTVFIVLKKSWRQLSFLHYYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMVQFVCMTTQAFYLLGTGCTTYPRRIVIVYAAYIMSLLFLFAQFYVNSYSKKPISKK 704
            W + DF +A+ +V  YL  + VG  +M  + P+D+  YP RF+YN+VQI+LCSYMC+EA ++A+RN Y ILPC P++ +NPPV N+LWLFY+SKILDF DTVFIVL+K W+QLSFLH YHH TIFLFYWLN+N GYDGD+YLTIVLNGFIHTVMYTYYFVSMHT  IWWK  LT MQMVQFV M +QA YLL TGCTTYP R+   Y  YI SLL LF  F++ SY  K   KK
Sbjct:   33 WPMADFYSAVMVVAAYLGFIFVGSFVMKFVQPLDAPTYPFRFIYNIVQIMLCSYMCLEAGIIAHRNNYGILPCVPFNVQNPPVGNVLWLFYISKILDFADTVFIVLRKKWKQLSFLHVYHHTTIFLFYWLNINVGYDGDIYLTIVLNGFIHTVMYTYYFVSMHTDKIWWKSSLTAMQMVQFVTMISQALYLLTTGCTTYPPRVTQAYCLYIFSLLILFGNFFIKSYMPKQGGKK 266          
BLAST of mRNA_P-littoralis_Contig174.47.1 vs. uniprot
Match: L1IAX0_GUITC (Elongation of fatty acids protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IAX0_GUITC)

HSP 1 Score: 319 bits (817), Expect = 3.610e-103
Identity = 149/236 (63.14%), Postives = 185/236 (78.39%), Query Frame = 3
Query:    3 QGWFLTDFATALAIVGLYLVMVAVGPMIMSGLSPID--SYPVRFVYNVVQIILCSYMCVEAFMLANRNGYPILPCAPYDAENPPVANLLWLFYVSKILDFMDTVFIVLKKSWRQLSFLHYYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMVQFVCMTTQAFYLLGTGCTTYPRRIVIVYAAYIMSLLFLFAQFYVNSYSKKPISKK 704
            QGWFLTDFA+A AI  +Y  +V VG ++M     +D  +YP+RFVYN++Q++LCSYM +EA +LA R+ Y ++PC P+  ENPP+A +LWLFY+SK+LDFMDT FIVL K W QLSFLH YHH TIF+ YW+NVN GYDGD+YLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLT+MQM+QF+ M  QA +LL + C T+PR++  +Y  YIMSL  LF  F++ SY   P SKK
Sbjct:   38 QGWFLTDFASAFAISAIYFALVIVGRIVMIPFRSLDKLTYPIRFVYNILQVMLCSYMTLEAGILAYRHNYNLVPCNPFKTENPPIAPVLWLFYISKVLDFMDTFFIVLGKKWEQLSFLHVYHHLTIFMIYWMNVNVGYDGDIYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTMMQMIQFITMNGQAIWLLQSNCQTFPRKVTQLYLVYIMSLFALFLNFFIRSYVS-PKSKK 272          
BLAST of mRNA_P-littoralis_Contig174.47.1 vs. uniprot
Match: A0A7R9WGN6_9STRA (Elongation of fatty acids protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WGN6_9STRA)

HSP 1 Score: 317 bits (812), Expect = 1.780e-102
Identity = 152/237 (64.14%), Postives = 182/237 (76.79%), Query Frame = 3
Query:    3 QGWFLTDFATALAIVGLYLVMVAVGPMIM-SGLSPIDSYPVRFVYNVVQIILCSYMCVEAFMLANRNGYPILPCAPYDAENPPVANLLWLFYVSKILDFMDTVFIVLKKSWRQLSFLHYYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKD--------IWWKKYLTLMQMVQFVCMTTQAFYLLGTGCTTYPRRIVIVYAAYIMSLLFLFAQFYVNSYSK 686
            +GWFLTDF++A  +   Y+  V +G  +M SG++ +D YP++F+YNV QI+LC+YM +EAF+LA RNGY  LPC   D ENPP+ANLLWLFY+SK+ DF DTVFIV+ K WRQLSFLH YHH TIFLFYWLN +  YDGD+YLTI+LNGFIHTVMYTYYF+ MHTKD        IWWK YLTLMQM+QFV M +QA YLLGT C     R+V VY  YI+SL FLFAQFYV SY+K
Sbjct:   30 EGWFLTDFSSAGTVALAYVAFVVIGSAVMKSGVAAMDPYPIKFIYNVSQIMLCAYMTIEAFLLAYRNGYTCLPCNNVDTENPPLANLLWLFYISKVWDFWDTVFIVIGKKWRQLSFLHVYHHTTIFLFYWLNSHVNYDGDIYLTILLNGFIHTVMYTYYFICMHTKDPKTGKSLPIWWKSYLTLMQMIQFVTMMSQATYLLGTQCEKTSLRVVFVYLVYILSLFFLFAQFYVQSYTK 266          
BLAST of mRNA_P-littoralis_Contig174.47.1 vs. uniprot
Match: A0A6U1Q8V8_9STRA (Elongation of fatty acids protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1Q8V8_9STRA)

HSP 1 Score: 315 bits (807), Expect = 1.470e-101
Identity = 151/231 (65.37%), Postives = 183/231 (79.22%), Query Frame = 3
Query:    3 QGWFLTDFATALAIVGLYLVMVAVGPMI--MSGLSPIDSYPVRFVYNVVQIILCSYMCVEAFMLANRNGYPILPCAPYDAENPPVANLLWLFYVSKILDFMDTVFIVLKKSWRQLSFLHYYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMVQFVCMTTQAFYLLGTGCTTYPRRIVIVYAAYIMSLLFLFAQFYVNSYSKK 689
            +GW LTD  +AL I G YL+ V VG M+  +  +  I  YPV+F+YN+VQ++LCSYM +EA M+A R GY  LPC P++A+NPPVA +L++FY+SKILDFMDT FI++ K W+QLSFLH YHH +IFLFYWLN+N GYDGDVYLTIVLNGFIHTVMYTYYFVS+HTKDIWWK  LT+ QM+QFV M  QA YLL TGC +YP RIV+ Y  YI+SLL LFA F+V SY KK
Sbjct:   40 KGWPLTDLESALTIAGAYLLFVLVGSMLFKVEAVPAIKLYPVQFLYNIVQVMLCSYMAIEAGMVAFRQGYTCLPCEPFNAKNPPVAEVLYIFYLSKILDFMDTFFIIIGKKWKQLSFLHVYHHTSIFLFYWLNINVGYDGDVYLTIVLNGFIHTVMYTYYFVSLHTKDIWWKSSLTMCQMIQFVTMNAQAGYLLLTGCKSYPPRIVLSYLVYILSLLVLFANFFVQSYLKK 270          
BLAST of mRNA_P-littoralis_Contig174.47.1 vs. uniprot
Match: A0A7S4JGP6_9STRA (Elongation of fatty acids protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JGP6_9STRA)

HSP 1 Score: 313 bits (803), Expect = 4.180e-101
Identity = 153/242 (63.22%), Postives = 182/242 (75.21%), Query Frame = 3
Query:    3 QGWFLTDFATALAIVGLYLVMVAVGPMIM-SGLSPIDSYPVRFVYNVVQIILCSYMCVEAFMLANRNGYPILPCAPYDAENPPVANLLWLFYVSKILDFMDTVFIVLKKSWRQLSFLHYYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKD--------IWWKKYLTLMQMVQFVCMTTQAFYLLGTGCTTYPRRIVIVYAAYIMSLLFLFAQFYVNSYSKKPISK 701
            +GWFLTDF TA +I   Y+  V +G  +M SG++ +D YP++F YNV QI+LC+YM +E F+LA RNGY  LPC   D +NPP+ANLLWLFYVSK+ DF DT+FIVL K WRQLSFLH YHH TIFLFYWLN +  +DGD+YLTIVLNGFIHTVMYTYYF+ MHTKD        IWWK  LTLMQ++QF+ M +QA YLL TGC     R+V VY  YI+SL FLFAQFYV SY+KKP  K
Sbjct:   30 EGWFLTDFRTAGSIALAYVAFVVIGSAVMKSGVAAMDPYPIKFFYNVSQIMLCAYMTIEGFLLAYRNGYTCLPCIDIDTKNPPLANLLWLFYVSKVWDFWDTIFIVLGKKWRQLSFLHVYHHTTIFLFYWLNAHVNFDGDIYLTIVLNGFIHTVMYTYYFICMHTKDPKTGKSLPIWWKSSLTLMQLIQFITMMSQATYLLVTGCQKTGLRVVSVYFVYILSLFFLFAQFYVASYTKKPKKK 271          
BLAST of mRNA_P-littoralis_Contig174.47.1 vs. uniprot
Match: A0A7R9ZKR5_9STRA (Elongation of fatty acids protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZKR5_9STRA)

HSP 1 Score: 304 bits (779), Expect = 1.830e-97
Identity = 147/243 (60.49%), Postives = 177/243 (72.84%), Query Frame = 3
Query:    3 QGWFLTDFATALAIVGLYLVMVAVGPMIMSGLSPIDSYPVRFVYNVVQIILCSYMCVEAFMLANRNGYPILPCAPYDAENPPVANLLWLFYVSKILDFMDTVFIVLKKSWRQLSFLHYYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKD--------IWWKKYLTLMQMVQFVCMTTQAFYLLGTGCTTYPRRIVIVYAAYIMSLLFLFAQFYVNSYSKKPISKKT 707
            +GWFLTDF++A  I   Y++ VA+G  +M+ L  ID YP++F+YNV QI+LC+YM +E   LA RN Y ILPC PY+  +P + NLLWLFY+SK+ DF DT+FIVL K WRQLSFLH YHH TIFLFYWLN N  YDGD++LTIVLNGFIHTVMYTYYF+ MHTKD        IWWK YLT+MQMVQFV M +Q  YL+ + C     R+   Y  YI+SL FLFAQFYV SY K   +KKT
Sbjct:   30 EGWFLTDFSSAFTIALAYVLFVAIGSQVMNFLPAIDPYPIKFLYNVSQIMLCAYMTLEGCFLAYRNNYTILPCEPYNQHDPAIGNLLWLFYISKVWDFWDTIFIVLGKKWRQLSFLHVYHHTTIFLFYWLNSNVFYDGDIFLTIVLNGFIHTVMYTYYFICMHTKDKSTGKSLPIWWKSYLTMMQMVQFVTMMSQGSYLVVSQCDQSSLRVSSTYVVYILSLFFLFAQFYVESYMKPKKNKKT 272          
BLAST of mRNA_P-littoralis_Contig174.47.1 vs. uniprot
Match: A0A7S2UR25_9STRA (Elongation of fatty acids protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UR25_9STRA)

HSP 1 Score: 300 bits (767), Expect = 1.090e-95
Identity = 147/244 (60.25%), Postives = 183/244 (75.00%), Query Frame = 3
Query:    3 QGWFLTDFATALAIVGLYLVMVAVGPMIM-SGLSPIDSYPVRFVYNVVQIILCSYMCVEAFMLANRNGYPILPCAPYDAENPPVANLLWLFYVSKILDFMDTVFIVLKKSWRQLSFLHYYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTK--------DIWWKKYLTLMQMVQFVCMTTQAFYLLGTGCTTYPRRIVIVYAAYIMSLLFLFAQFYVNSYSKKPISKKT 707
             GWFLTDF +A+ I  +Y+V V VG  IM +G+  +D YP++FVYNV QI +C+YM VEAF++A R GY  LPC  +D ENPP+A+LL+LFY+SK+ DF DT+FIV+ K WRQLSFLH YHH TIFLFYWLN +  YDGD+YLTI+LNGFIHTVMYTYYF+ MHTK         IWWK  LT+MQ++QFV M +QA YLL +GC     R+  +Y  YI+SL FLFAQFY++SYSK P  +KT
Sbjct:   30 DGWFLTDFTSAITIAIVYVVFVVVGSAIMKAGVPAMDPYPIKFVYNVSQIFMCAYMTVEAFLIAYRAGYHALPCNNFDTENPPLAHLLYLFYLSKVWDFWDTIFIVIGKKWRQLSFLHVYHHTTIFLFYWLNSHVNYDGDIYLTILLNGFIHTVMYTYYFICMHTKVPETGKSLPIWWKSSLTMMQLIQFVSMMSQATYLLVSGCEENTSRVTALYFVYILSLFFLFAQFYISSYSK-PKKRKT 272          
BLAST of mRNA_P-littoralis_Contig174.47.1 vs. uniprot
Match: A0A1S7C7Q3_9STRA (Elongation of fatty acids protein n=1 Tax=Nannochloropsis oceanica TaxID=145522 RepID=A0A1S7C7Q3_9STRA)

HSP 1 Score: 299 bits (766), Expect = 1.710e-95
Identity = 143/240 (59.58%), Postives = 173/240 (72.08%), Query Frame = 3
Query:    3 QGWFLTDFATALAIVGLYLVMVAVGPMIMSGLSPIDSYPVRFVYNVVQIILCSYMCVEAFMLANRNGYPILPCAPYDAENPPVANLLWLFYVSKILDFMDTVFIVLKKSWRQLSFLHYYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMVQFVCMTTQAFYLLGTGCTTYPRRIVIVYAAYIMSLLFLFAQFYVNSYS------KKPISKK 704
            + W L     ALAI   YL++V VG  +M    P+  Y ++F YN+ Q+ LCSYMC+EA + A RN Y  LPC P++A NPP+A LLWLFYVSK+ DF DTVFI+L K W QLSFLH YHH TIFL YWLN+NAGYDGD++LT++LNG IHTVMYTYYF+SMHTKDIWWKKYLTL Q++QF+ M  QA YLL  GC  +  +I  +Y  YI+SLL LF  FY  SYS      KKP+SKK
Sbjct:   36 RTWPLAGLDVALAIAAFYLIIVFVGSAMMKNAQPVKLYGLQFFYNISQVALCSYMCIEAAIQAYRNNYTFLPCEPFNATNPPIAPLLWLFYVSKVFDFADTVFIILGKKWNQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYTYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYLLCVGCKGFSPQITKLYLGYILSLLVLFLNFYFKSYSGVKPNGKKPVSKK 275          
BLAST of mRNA_P-littoralis_Contig174.47.1 vs. uniprot
Match: A0A1E7FWF4_9STRA (Elongation of fatty acids protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWF4_9STRA)

HSP 1 Score: 296 bits (759), Expect = 1.690e-94
Identity = 143/244 (58.61%), Postives = 176/244 (72.13%), Query Frame = 3
Query:    3 QGWFLTDFATALAIVGLYLVMVAVGPMIMSGLSPIDSYPVRFVYNVVQIILCSYMCVEAFMLANRNGYPILPCAPYDAENPPVANLLWLFYVSKILDFMDTVFIVLKKSWRQLSFLHYYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKD--------IWWKKYLTLMQMVQFVCMTTQAFYLLGTGCTTYPRRIVIVYAAYIMSLLFLFAQFYVNSYSKKPISKKTA 710
            +GWFLTDF +A +I  +Y++ V +G  +M  L  ID YP++F YNV QI+LC+YM +EA +LA RNGY I+PC  Y+ ++P + NLLWLFYVSK+ DF DT+FIVL K WRQLSFLH YHH TIFLFYWLN N  YDGD+YLTI LNGFIHTVMYTYYF+ MHTKD        IWWK  LTL+Q+ QF+ M +Q  YL+  GC +   R+   Y  YI+SL FLFAQF+V SY + P   KTA
Sbjct:   30 KGWFLTDFTSAFSIALVYVLFVIIGSQVMKVLPAIDPYPIKFFYNVSQIMLCAYMTIEACLLAYRNGYTIMPCVGYNRDDPAIGNLLWLFYVSKVWDFWDTIFIVLGKKWRQLSFLHVYHHTTIFLFYWLNANVFYDGDIYLTIALNGFIHTVMYTYYFICMHTKDKKTGKSLPIWWKSSLTLLQLFQFITMMSQGLYLIIFGCESLSIRVTATYVVYILSLFFLFAQFFVASYMQ-PKKSKTA 272          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig174.47.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYS6_ECTSI6.680e-13788.26Elongation of fatty acids protein n=2 Tax=Ectocarp... [more]
A0A835Z8H5_9STRA6.930e-10564.96Elongation of fatty acids protein n=1 Tax=Tribonem... [more]
L1IAX0_GUITC3.610e-10363.14Elongation of fatty acids protein n=2 Tax=Guillard... [more]
A0A7R9WGN6_9STRA1.780e-10264.14Elongation of fatty acids protein n=1 Tax=Pseudict... [more]
A0A6U1Q8V8_9STRA1.470e-10165.37Elongation of fatty acids protein n=1 Tax=Fibrocap... [more]
A0A7S4JGP6_9STRA4.180e-10163.22Elongation of fatty acids protein n=2 Tax=Odontell... [more]
A0A7R9ZKR5_9STRA1.830e-9760.49Elongation of fatty acids protein n=1 Tax=Craspedo... [more]
A0A7S2UR25_9STRA1.090e-9560.25Elongation of fatty acids protein n=1 Tax=Attheya ... [more]
A0A1S7C7Q3_9STRA1.710e-9559.58Elongation of fatty acids protein n=1 Tax=Nannochl... [more]
A0A1E7FWF4_9STRA1.690e-9458.61Elongation of fatty acids protein n=1 Tax=Fragilar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig174contigP-littoralis_Contig174:212910..217054 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog55529.EKX33396
PFAMsELO
Model size1503
Max annot lvl2759|Eukaryota
KEGG rclassRC00004,RC02888,RC02997
KEGG koko:K10249
KEGG ReactionR09419,R10825
KEGG Pathwayko00062,ko01110,map00062,map01110
KEGG ModuleM00415
Hectar predicted targeting categoryother localisation
Exons6
Evalue5.93e-98
EggNOG OGsKOG3071@1|root,KOG3071@2759|Eukaryota
Ec32 ortholog descriptionFatty acid elongase
Ec32 orthologEc-19_002350.1
EC2.3.1.199
Descriptionfatty acid elongation, saturated fatty acid
Cds size651
COG categoryI
BRITEko00000,ko00001,ko00002,ko01000,ko01004
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig174.47.1prot_P-littoralis_Contig174.47.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig174 213700..216992 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789838.2453413-UTR-P-littoralis_Contig174:212909..2136991680789838.2453413-UTR-P-littoralis_Contig174:212909..213699Pylaiella littoralis U1_48UTRP-littoralis_Contig174 212910..213699 -
1680789838.3158796-UTR-P-littoralis_Contig174:216992..2170541680789838.3158796-UTR-P-littoralis_Contig174:216992..217054Pylaiella littoralis U1_48UTRP-littoralis_Contig174 216993..217054 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789838.2600708-CDS-P-littoralis_Contig174:213699..2138261680789838.2600708-CDS-P-littoralis_Contig174:213699..213826Pylaiella littoralis U1_48CDSP-littoralis_Contig174 213700..213826 -
1680789838.270608-CDS-P-littoralis_Contig174:214173..2142261680789838.270608-CDS-P-littoralis_Contig174:214173..214226Pylaiella littoralis U1_48CDSP-littoralis_Contig174 214174..214226 -
1680789838.2791293-CDS-P-littoralis_Contig174:215216..2153691680789838.2791293-CDS-P-littoralis_Contig174:215216..215369Pylaiella littoralis U1_48CDSP-littoralis_Contig174 215217..215369 -
1680789838.28747-CDS-P-littoralis_Contig174:215641..2157371680789838.28747-CDS-P-littoralis_Contig174:215641..215737Pylaiella littoralis U1_48CDSP-littoralis_Contig174 215642..215737 -
1680789838.2975552-CDS-P-littoralis_Contig174:216233..2163711680789838.2975552-CDS-P-littoralis_Contig174:216233..216371Pylaiella littoralis U1_48CDSP-littoralis_Contig174 216234..216371 -
1680789838.3060324-CDS-P-littoralis_Contig174:216908..2169921680789838.3060324-CDS-P-littoralis_Contig174:216908..216992Pylaiella littoralis U1_48CDSP-littoralis_Contig174 216909..216992 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig174.47.1

>prot_P-littoralis_Contig174.47.1 ID=prot_P-littoralis_Contig174.47.1|Name=mRNA_P-littoralis_Contig174.47.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=217bp
MVAVGPMIMSGLSPIDSYPVRFVYNVVQIILCSYMCVEAFMLANRNGYPI
LPCAPYDAENPPVANLLWLFYVSKILDFMDTVFIVLKKSWRQLSFLHYYH
HCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWK
KYLTLMQMVQFVCMTTQAFYLLGTGCTTYPRRIVIVYAAYIMSLLFLFAQ
FYVNSYSKKPISKKTA*
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mRNA from alignment at P-littoralis_Contig174:212910..217054-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig174.47.1 ID=mRNA_P-littoralis_Contig174.47.1|Name=mRNA_P-littoralis_Contig174.47.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4145bp|location=Sequence derived from alignment at P-littoralis_Contig174:212910..217054- (Pylaiella littoralis U1_48)
CGCAGGGATGGTTTCTGACGGACTTCGCCACCGCTCTAGCCATCGTGGGG CTGTATCTGGTCATGGTGGCCGTCGGCCCCATGATCATGTCCGGGCTGAG CCCGATCGACAGCTACCCTGTTCGGTTCGTCTACAACGTCGTGCAGGTAA GAGAGCAACTGCCATACTTATTCACTTCGACAAAGCCCCGTAGACTCAAC CTAGTTTTCGCTTGGGTTGCACGGCTGCAGCACCGAGAACCAGTTGTCAC ACGGAACATCGATTTGTCATTTCCGAGAAAGATGGCAGTGTGATATCCTC TCACTACGATCCTGCAGCTCAAGTCGACGCGCTTACCACAGGTCGTCATT TCACGATCTATCTGCTGTTTGATACCCATTTAAAATCAACTTCTTCCAGT GTACTCTGTAGGTTATTGTTGGATCTTGCGGCTGTTTCTCCCGCAACGAG GACAGACGCATTTTCATTGCCCACCAGGACGATACTTACTCTTATTTTTT TCGTGTACATTATTGCGTTCGGAGTGTCAAACACGAGGAGGCAGGCAGGG AAAACAAATTTGTCCTCACCCAGCAGTAAGGTAAGCCAGAAAAAACAAGT GCCATGGCCAACAGCTGTGGTAATCACGCGCCACGCGCCGCCACTCTCTC GCTTGTGCCGTTTGTGCTTGCTTTTATGCGCAGATCATCTTGTGCTCGTA CATGTGCGTTGAGGCCTTCATGCTCGCGAACCGCAATGGTTACCCCATCC TCCCATGCGCCCCTTACGACGCCGAGAACCCCCCTGTGGCCAACCTGCTG TGGCTCTTCTATGTTTCCAAGGTACGTGAAGAGGAGATTTGCTTTTACTT TCGTGGTAAGCAATGGCTGCCAGAATTATTCTGGAATGCGCCCTAGTTAT CTGTCGTGGTTTCTAGAGAGGCTGACCGCACACCACCCAATTTCGGCTGG CCAGGCAAGGTTTCCTGAAGACGTTCGGCATGTGGCAAAAGAGTGGGGGC GTGGTGGCGAAGTCCGTAACAATCGATGCTTTGACGGGCTTTCAGTCCGT TGACTCATTTGTAGTTTTGGTGAGGGTCGCAAACGCTCCATACGCTTGTC TGCGTGGAAAAACATCACCTTCTTTCCCGGCCACCACAGTAGTAAAATGT ACAAAACCACGGTTTAGAGGACTCTTGCCATCGGCTGCCGCAGACGCTTC GTGACGTCGTCGCCGTTCCTCGATGTACCACCGATTTTTCTACAGTTCTC TAGATTATTTCGCTCAAACAGCAGTGTGACAACTGTTGTCGTTTCCGCGT CCGTTTTTCCTCCACAGATCCTTGACTTCATGGACACTGTTTTCATCGTG TTGAAGAAGTCTTGGAGGCAGCTCTCCTTCCTGCACTACTACCACCACTG CACCATCTTCCTGGTAAGTCTGAAGTTTTAACACTCGCCTGCACTTGCCT AGCGGACGCAGTCAACAACGGGGATGCGGCCGAAGTATCGTGGGGTTTTC TATTATTTCCCTGTGTTTGAGGCGGAATTCGAATGGTGTTGGTGGTCGAA AATACATACTGTTTCGCGGACAGCCTTTGTACAAGCGTTGTCGTTCCCTC TCTTCTGCATGGTATTTATGACCACAACCGTTAAATGCTACCTTTCGTGT GTCCCGTGCGTTGCGCTCGTTTGATTCGAGATTAGTTCTACTGGTTGAAC GTGAACGCCGGCTATGATGGGGACGTGTACCTGACCATCGTCCTGAACGG GTTCATCCACACCGTCATGTACACGTACTACTTCGTCAGTATGCACACCA AGGACATCTGGTGGAAGAAATACCTCACCCTCATGCAGGTTTGTTTAGCG TCGTCTCGATCGTTCCGATTGGTTTTGGCTCCAGCGCCCAAGGCATGATA TTCGACTTCCTAGCAGAGGGCGTGGGTCCATTGAAATGAGGCACAAGTAA AATGCGGCACCCCAAAAGAGGTATAGTACTCACAGGTATTTGTGTCTAAA CCAGCTTGTATGAGACGTTACGTTCATTTCAACAGTTGATCAAGACCCTG CGGCGATCAATTTGCGAAAGGCCCCAGGCATGATCCTTGGCTTACATACT GCTGTACACACGCACCGGCCTCCTACCTTGTTGTTGTTGTTGATTCTCAC ATTAGCTCATCGCCAAAATCTAGCCCGCGGCCACAAAAAGTGCTGAGCCC TAGGAAGATCCGAAAAACAGAAAGAAACTACAAGGGAATACCCAAGAAAG ACCGAAGAAGATACAAGTACACCTTCCTACGCGGTGTGCATCACTGAACT ACAACAGTCACAGCAGTACCAACATCAAACCTACTTTCAGCGTCGTTCAT TTGACTACAGCATCGTGTTCAGTCTCCTCCCGCCCCACTTGTAACTAATA ACCTGCTGCTACAAGCAGTCAGTAGGTAGCTGCAGACTACAGCAGTTAGT TGCTGTCTGGAGTGCTGCCTGCAACGTACAAGTAGCCCCGGCAATCGGAG AAGACAGAAAAAGAAAAAACACGAAAACACACAACGTATCATCAGATGTT GTCGAGGATGGTGTCTCCATGCCGTCCTTGCGACGCTGGTGATGATGTCG CCCTACCTCTTTTCGTTTGATTCTGTACAGAGACTGGATCACGACAACGC CCAAGATGCCTTTTGTACGTGCTTGTGGCAGCCATTTTTTCCGAGGCTTT GCAGCGGTGATTTTGCTCCAAGTTAGACTCACCAGTCATCGCAAACCTGT TTGTGCCAACCTTCGTGTGTCTACCGCCTCCTCTCCCAAACCATATTATC ATTTCCCTTGCGCTCTTTTGCCCCGCAGATGGTCCAGTTCGTGTGCATGA CGACCCAGGCCTTTTACCTCTTGGGTACCGGGTGAGTTGTTGTCTACTAT GTTTCGTGCAAAAACAATCATTTGCTGGTGCAGTATGCAGCGGCGAAATA GTCATGCCCTCACCTGATTTGTGGCAAGCGCAGAATTTGCTCATATTAGA GGCAAGTTCTTGCTCAAAACGTTCCGTGTTTTTCTCTGGAGCGGTGTACA ATGAGGAACTTTTTGCCAAAAGTTTTTACCTTTCGTGGTCTCCTCGGATC GGAGGCCTCGGTTCATGAACGTTTTACTCTGGTGCCGCTTTTGATGATAC CGGTGCTGTATCCCTCACTTTCCTGACCCAACCACCGCTTTACTCCGTTT CTCTCTTGCTATTTTGGGTCCCCTACAGGTGCACAACCTACCCTCGCCGC ATCGTGATTGTGTACGCTGCGTACATCATGTCTCTGCTATTTCTGTTCGC GCAGTTCTACGTCAACAGCTACTCGAAGAAGCCCATCTCCAAGAAGACCG CATAGTGGAGCATCATCGCATCAGGCAGAAAATATGGGCGGACCTCGCGA TGCCTGGTATTATTTTACGTCGTGCGACTTGCTGCGTGTGAGACCACCGC TACAGAAGTTACTTCTGAGCCCGGTGCAAAAATACTGCTTCGTCTGAGGC GGGCGTTCTCGACAACGCAGGGTCATCCAGTTACGAGACTGAACGCTACC GCACCAACAATGAACGGTGATGGTCCGGACGGGCCGGAGAGGACGGTGAC GTCAAACTCGAAGTTCAATCGGGGCGCGAATTTTCAACGAAGTTTGTCTG CGAGCAGGATGGGGAGACGATTTCGTCCATTTGACTGCTCGTGAAGGAGA GTAGGAGAGGGGAGATAGACACTTGGAGGAAACACACGGGCAAGAAGCTG AAACAATTTTTTATACGTACTTTTACGGCAGGTCGCTTTGTGTGGTTGAG AAGTGATTGTTGATTTGCTCATCGTCGTTCATGCCTAGGCCATGTCGGCC TCAGTAGCAAGCACGGTGAGGAATATATTTGTGGAGGATTCGGTGGGTTC GTTTACGGACAATTGCAGGAGGTCGTGTCCGTTTCGCGGATTATTGTTGG GTTGTGACTGTGAGGCTGGATCCTATTTGGGAAAAAGAGCAGTCGAAAAT TTTGTAGGTTTGAGCACAAGGTTGACGTTGGCAACAAAAGTTCGCCATTG AGCAGGTTGACTTTTTTTTTCTGTAGGAGAACGCACACACACACTGCGGC GATTGTCAGTTCTGCTTTTCAGCTTTTGAATCTCGACAAGGGGTA
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Coding sequence (CDS) from alignment at P-littoralis_Contig174:212910..217054-

>mRNA_P-littoralis_Contig174.47.1 ID=mRNA_P-littoralis_Contig174.47.1|Name=mRNA_P-littoralis_Contig174.47.1|organism=Pylaiella littoralis U1_48|type=CDS|length=651bp|location=Sequence derived from alignment at P-littoralis_Contig174:212910..217054- (Pylaiella littoralis U1_48)
ATGGTGGCCGTCGGCCCCATGATCATGTCCGGGCTGAGCCCGATCGACAG
CTACCCTGTTCGGTTCGTCTACAACGTCGTGCAGATCATCTTGTGCTCGT
ACATGTGCGTTGAGGCCTTCATGCTCGCGAACCGCAATGGTTACCCCATC
CTCCCATGCGCCCCTTACGACGCCGAGAACCCCCCTGTGGCCAACCTGCT
GTGGCTCTTCTATGTTTCCAAGATCCTTGACTTCATGGACACTGTTTTCA
TCGTGTTGAAGAAGTCTTGGAGGCAGCTCTCCTTCCTGCACTACTACCAC
CACTGCACCATCTTCCTGTTCTACTGGTTGAACGTGAACGCCGGCTATGA
TGGGGACGTGTACCTGACCATCGTCCTGAACGGGTTCATCCACACCGTCA
TGTACACGTACTACTTCGTCAGTATGCACACCAAGGACATCTGGTGGAAG
AAATACCTCACCCTCATGCAGATGGTCCAGTTCGTGTGCATGACGACCCA
GGCCTTTTACCTCTTGGGTACCGGGTGCACAACCTACCCTCGCCGCATCG
TGATTGTGTACGCTGCGTACATCATGTCTCTGCTATTTCTGTTCGCGCAG
TTCTACGTCAACAGCTACTCGAAGAAGCCCATCTCCAAGAAGACCGCATA
G
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