mRNA_P-littoralis_Contig174.42.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig174.42.1
Unique NamemRNA_P-littoralis_Contig174.42.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig174.42.1 vs. uniprot
Match: D7FYS4_ECTSI (40S ribosomal protein S14 n=3 Tax=Sar TaxID=2698737 RepID=D7FYS4_ECTSI)

HSP 1 Score: 286 bits (732), Expect = 6.810e-93
Identity = 148/150 (98.67%), Postives = 148/150 (98.67%), Query Frame = 2 
Query:  263 ADKKAKEVKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 712
            ADKK KE KVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL
Sbjct:    2 ADKKTKEDKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 151
[Close]
BLAST of mRNA_P-littoralis_Contig174.42.1 vs. uniprot
Match: A0A218V1C4_9PASE (40S ribosomal protein S14 n=5 Tax=Gnathostomata TaxID=7776 RepID=A0A218V1C4_9PASE)

HSP 1 Score: 260 bits (665), Expect = 1.250e-82
Identity = 131/157 (83.44%), Postives = 146/157 (92.99%), Query Frame = 2 
Query:  242 YNQCSEKADKKAKEVKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 712
            ++ CSE A +K KE K E+ ++LGP+VAEGENVFGV HIFASFNDTFVH+TDLSG+ET+ RVTGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGN+TKTPGPGAQSALRALAR+GMKIGRIEDVTPIP+D TRRKGGRRGRRL
Sbjct:    6 FHFCSEMAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL 162
[Close]
BLAST of mRNA_P-littoralis_Contig174.42.1 vs. uniprot
Match: A0A674GH01_TAEGU (Uncharacterized protein n=3 Tax=Euteleostomi TaxID=117571 RepID=A0A674GH01_TAEGU)

HSP 1 Score: 260 bits (664), Expect = 1.770e-82
Identity = 131/154 (85.06%), Postives = 144/154 (93.51%), Query Frame = 2 
Query:  251 CSEKADKKAKEVKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 712
            CSE A +K KE K E+ ++LGP+VAEGENVFGV HIFASFNDTFVH+TDLSG+ET+ RVTGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGN+TKTPGPGAQSALRALAR+GMKIGRIEDVTPIP+D TRRKGGRRGRRL
Sbjct:    9 CSEMAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL 162
[Close]
BLAST of mRNA_P-littoralis_Contig174.42.1 vs. uniprot
Match: A0A835RMY5_VANPL (Uncharacterized protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835RMY5_VANPL)

HSP 1 Score: 260 bits (665), Expect = 3.350e-82
Identity = 134/152 (88.16%), Postives = 143/152 (94.08%), Query Frame = 2 
Query:  257 EKADKKAKEVKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 712
            E   +KAKE K EE VTLGPKV EGE+VFGVAHIFASFNDTF+H+TDLSGRET+VR+TGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GMKIGRIEDVTPIPTD TRRKGGRRGRRL
Sbjct:   41 ESGRRKAKETK-EETVTLGPKVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRRGRRL 191
[Close]
BLAST of mRNA_P-littoralis_Contig174.42.1 vs. uniprot
Match: M1XK24_9METZ (40S ribosomal protein S14 n=1 Tax=Sycon ciliatum TaxID=27933 RepID=M1XK24_9METZ)

HSP 1 Score: 259 bits (661), Expect = 3.830e-82
Identity = 131/153 (85.62%), Postives = 141/153 (92.16%), Query Frame = 2 
Query:  254 SEKADKKAKEVKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 712
            S+   +K KE K EE + LGP+V EGENVFGVAHIFASFNDTFVHITDLSG+ET+ RVTGGMKVKADRDEASPYAAMLAAQDVA RCKE+GITALHIK+RATGGN+TKTPGPGAQSALRALARAGMKIGRIEDVTPIP+D TRRKGGRRGRRL
Sbjct:    2 SKSTKRKGKEAKKEENIVLGPQVGEGENVFGVAHIFASFNDTFVHITDLSGKETITRVTGGMKVKADRDEASPYAAMLAAQDVAVRCKEVGITALHIKLRATGGNRTKTPGPGAQSALRALARAGMKIGRIEDVTPIPSDSTRRKGGRRGRRL 154
[Close]
BLAST of mRNA_P-littoralis_Contig174.42.1 vs. uniprot
Match: U9TVX7_RHIID (Ribosomal protein S11-domain-containing protein n=10 Tax=Eukaryota TaxID=2759 RepID=U9TVX7_RHIID)

HSP 1 Score: 257 bits (656), Expect = 1.890e-81
Identity = 130/148 (87.84%), Postives = 142/148 (95.95%), Query Frame = 2 
Query:  269 KKAKEVKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 712
            KK K+VKVEE ++LGP+V EGE V+GVAHIFASFNDTFVH+TDLSG+ET+VRVTGGMKVKADRDE+SPYAAMLAAQDVAA+CKELGITALHIK+RATGGN TKTPGPGAQSALRALARAGM+IGRIEDVTPIPTD TRRKGGRRGRRL
Sbjct:    3 KKQKKVKVEENISLGPQVREGELVYGVAHIFASFNDTFVHVTDLSGKETIVRVTGGMKVKADRDESSPYAAMLAAQDVAAKCKELGITALHIKLRATGGNGTKTPGPGAQSALRALARAGMRIGRIEDVTPIPTDSTRRKGGRRGRRL 150
[Close]
BLAST of mRNA_P-littoralis_Contig174.42.1 vs. uniprot
Match: A0A8C4Q5K9_EPTBU (Ribosomal protein S14 n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4Q5K9_EPTBU)

HSP 1 Score: 257 bits (656), Expect = 1.960e-81
Identity = 128/150 (85.33%), Postives = 142/150 (94.67%), Query Frame = 2 
Query:  263 ADKKAKEVKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 712
            A +K KE K E+ ++LGP+V EGENVFGVAHIFASFNDTFVH+TDLSG+ET+ RVTGGMKVKADRDE+SPYAAMLAAQDVAARCKELGITALH+++RATGGN+TKTPGPGAQSALRALAR+GMKIGRIEDVTPIPTD TRRKGGRRGRRL
Sbjct:    2 APRKGKEKKEEQMISLGPQVTEGENVFGVAHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAARCKELGITALHVRLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRRGRRL 151
[Close]
BLAST of mRNA_P-littoralis_Contig174.42.1 vs. uniprot
Match: W5PBP1_SHEEP (Ribosomal protein S14 n=6 Tax=Amniota TaxID=32524 RepID=W5PBP1_SHEEP)

HSP 1 Score: 256 bits (655), Expect = 3.750e-81
Identity = 130/153 (84.97%), Postives = 143/153 (93.46%), Query Frame = 2 
Query:  254 SEKADKKAKEVKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 712
            SE A +K KE K E+ ++LGP+VAEGENVFGV HIFASFNDTFVH+TDLSG+ET+ RVTGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGN+TKTPGPGAQSALRALAR+GMKIGRIEDVTPIP+D TRRKGGRRGRRL
Sbjct:    8 SEMAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL 160
[Close]
BLAST of mRNA_P-littoralis_Contig174.42.1 vs. uniprot
Match: A0A1D1Z556_9ARAE (40S ribosomal protein S14-3 n=2 Tax=Viridiplantae TaxID=33090 RepID=A0A1D1Z556_9ARAE)

HSP 1 Score: 256 bits (654), Expect = 3.790e-81
Identity = 129/145 (88.97%), Postives = 139/145 (95.86%), Query Frame = 2 
Query:  278 KEVKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 712
            K+ KVEE ++LGP+V +GE VFGVAHIFASFNDTFVH+TDLSGRET+VRVTGGMKVKADRDE+SPYAAMLAAQDVAA+CKELGITALHIK+RATGGN TKTPGPGAQSALRALARAGMKIGRIEDVTPIPTD TRRKGGRRGRRL
Sbjct:    6 KKAKVEENISLGPQVRDGEEVFGVAHIFASFNDTFVHVTDLSGRETIVRVTGGMKVKADRDESSPYAAMLAAQDVAAKCKELGITALHIKLRATGGNGTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDSTRRKGGRRGRRL 150
[Close]
BLAST of mRNA_P-littoralis_Contig174.42.1 vs. uniprot
Match: A0A5E4AXU3_MARMO (Uncharacterized protein n=1 Tax=Marmota monax TaxID=9995 RepID=A0A5E4AXU3_MARMO)

HSP 1 Score: 256 bits (655), Expect = 4.450e-81
Identity = 130/153 (84.97%), Postives = 143/153 (93.46%), Query Frame = 2 
Query:  254 SEKADKKAKEVKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 712
            SE A +K KE K E+ ++LGP+VAEGENVFGV HIFASFNDTFVH+TDLSG+ET+ RVTGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGN+TKTPGPGAQSALRALAR+GMKIGRIEDVTPIP+D TRRKGGRRGRRL
Sbjct:   13 SEMAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL 165
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig174.42.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYS4_ECTSI6.810e-9398.6740S ribosomal protein S14 n=3 Tax=Sar TaxID=269873... [more]
A0A218V1C4_9PASE1.250e-8283.4440S ribosomal protein S14 n=5 Tax=Gnathostomata Ta... [more]
A0A674GH01_TAEGU1.770e-8285.06Uncharacterized protein n=3 Tax=Euteleostomi TaxID... [more]
A0A835RMY5_VANPL3.350e-8288.16Uncharacterized protein n=1 Tax=Vanilla planifolia... [more]
M1XK24_9METZ3.830e-8285.6240S ribosomal protein S14 n=1 Tax=Sycon ciliatum T... [more]
U9TVX7_RHIID1.890e-8187.84Ribosomal protein S11-domain-containing protein n=... [more]
A0A8C4Q5K9_EPTBU1.960e-8185.33Ribosomal protein S14 n=1 Tax=Eptatretus burgeri T... [more]
W5PBP1_SHEEP3.750e-8184.97Ribosomal protein S14 n=6 Tax=Amniota TaxID=32524 ... [more]
A0A1D1Z556_9ARAE3.790e-8188.9740S ribosomal protein S14-3 n=2 Tax=Viridiplantae ... [more]
A0A5E4AXU3_MARMO4.450e-8184.97Uncharacterized protein n=1 Tax=Marmota monax TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig174contigP-littoralis_Contig174:199413..204327 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FYS4
Preferred nameRPS14
PFAMsRibosomal_S11
Model size1353
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC02753
KEGG koko:K01000,ko:K02955
KEGG TC9.B.146
KEGG ReactionR05629,R05630
KEGG Pathwayko00550,ko01100,ko01502,ko03010,map00550,map01100,map01502,map03010
KEGG ModuleM00177
Hectar predicted targeting categoryother localisation
GOsGO:0000028,GO:0000122,GO:0000184,GO:0000462,GO:0000956,GO:0002181,GO:0002262,GO:0002376,GO:0002520,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0005840,GO:0005844,GO:0005886,GO:0005911,GO:0006139,GO:0006355,GO:0006357,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006417,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006996,GO:0007275,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009506,GO:0009507,GO:0009536,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015031,GO:0015833,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0019219,GO:0019222,GO:0019439,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030490,GO:0030684,GO:0030686,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032040,GO:0032268,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033365,GO:0034101,GO:0034248,GO:0034470,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0042592,GO:0042788,GO:0042886,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045182,GO:0045184,GO:0045892,GO:0045934,GO:0046483,GO:0046700,GO:0046907,GO:0048027,GO:0048513,GO:0048519,GO:0048523,GO:0048534,GO:0048731,GO:0048856,GO:0048869,GO:0048872,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051246,GO:0051252,GO:0051253,GO:0051641,GO:0051649,GO:0055044,GO:0060255,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070181,GO:0070727,GO:0070925,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0071826,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0080090,GO:0090150,GO:0090304,GO:0097159,GO:0098588,GO:0098805,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:1990904,GO:2000112,GO:2000113,GO:2001141
Exons5
Evalue1.11e-62
EggNOG OGsCOG0100@1|root,KOG0407@2759|Eukaryota
Ec32 ortholog descriptionRibosomal protein S11
Ec32 orthologEc-19_002330.1
EC2.7.8.13
DescriptionmRNA 5'-UTR binding
Cds size300
COG categoryJ
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko01011,ko03011
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig174.42.1prot_P-littoralis_Contig174.42.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig174 200051..201626 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789837.9806318-UTR-P-littoralis_Contig174:199412..2000501680789837.9806318-UTR-P-littoralis_Contig174:199412..200050Pylaiella littoralis U1_48UTRP-littoralis_Contig174 199413..200050 -
1680789838.040568-UTR-P-littoralis_Contig174:201626..2016561680789838.040568-UTR-P-littoralis_Contig174:201626..201656Pylaiella littoralis U1_48UTRP-littoralis_Contig174 201627..201656 -
1680789838.0620463-UTR-P-littoralis_Contig174:202764..2028871680789838.0620463-UTR-P-littoralis_Contig174:202764..202887Pylaiella littoralis U1_48UTRP-littoralis_Contig174 202765..202887 -
1680789838.0723712-UTR-P-littoralis_Contig174:204065..2043271680789838.0723712-UTR-P-littoralis_Contig174:204065..204327Pylaiella littoralis U1_48UTRP-littoralis_Contig174 204066..204327 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789838.002392-CDS-P-littoralis_Contig174:200050..2001311680789838.002392-CDS-P-littoralis_Contig174:200050..200131Pylaiella littoralis U1_48CDSP-littoralis_Contig174 200051..200131 -
1680789838.012973-CDS-P-littoralis_Contig174:200698..2008151680789838.012973-CDS-P-littoralis_Contig174:200698..200815Pylaiella littoralis U1_48CDSP-littoralis_Contig174 200699..200815 -
1680789838.0320365-CDS-P-littoralis_Contig174:201524..2016261680789838.0320365-CDS-P-littoralis_Contig174:201524..201626Pylaiella littoralis U1_48CDSP-littoralis_Contig174 201525..201626 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig174.42.1

>prot_P-littoralis_Contig174.42.1 ID=prot_P-littoralis_Contig174.42.1|Name=mRNA_P-littoralis_Contig174.42.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=100bp
MVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGG
NKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL*
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mRNA from alignment at P-littoralis_Contig174:199413..204327-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig174.42.1 ID=mRNA_P-littoralis_Contig174.42.1|Name=mRNA_P-littoralis_Contig174.42.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4915bp|location=Sequence derived from alignment at P-littoralis_Contig174:199413..204327- (Pylaiella littoralis U1_48)
CTTATCCTCTCGGCAGGCACCTCATTTCTTCAAGCATGGTGAGTGTTTGT
TCACCTTTCCCTTGGTAGTTGACGGGGCCATATTTTCCGCCCGCACCGCG
CGAGAGGCGCTCTCTCTTTTCTGCCGGAGCTGAGGCGCAGGCATTTGCCG
ACTCGCTGGCCAGGAAGCAGTGGAGGAATCATGGCCGTGCCTTTGTTGAC
GACACAGGCAGCTGGCTGATGAAATCGCTAGGCGCAGAGACTACAACCAG
TGTTCTGAAAAGGTCTCGTTCTTCGTGAAAGTCACGAGTATGCTGTGGCT
TGTAGCCCAGGACACCGATTGTCCAGGGACAGTTCAGTCAAAGATGATTT
CTCCCTCAAACTCGAATGCAACGAAGTAGCCGCAGACAGAGATGTTACGC
AATTTTACTTGTGGCTGAGGCCTTTGATCGTGACAACATGGCAGTGCAAA
GTACACGCAGCCGCTACGCCCCACGACCTTCTGACTTCGATTGCTCGACG
TTTGTCTGGAGGTGACATCCATACTAGGGGTGGAATTTCGAGGAGAAAAT
TCACCTCAACATTTTCGTAGTCAAGTGAAACATCCCGATAGAGTGAACGC
CTTTTGGAATCCGTTCTCTCGCCTCGCCCTTACACTCTCAAAGATGATAG
ACAGCTGGGTGACACGTACACACATAAGTGTAGTTCGTCGTACAGACTTG
CTGTGAAAATATTAGCCACTTTTTTGTACGTGACTCGCGGCTTCGCAGTA
CAGGAACGGGGCGGTCGACTCGATGTTTGATGCTTTTGCGAATGGGATGT
AGCTGGCAATGCGATTCTTGTGGACATAGTGTCGGGTACTGTACAGACTC
GACGATTGACGCTGCTGCACTTCCGATGTTCTGGTGTCATTCTTGCACCT
GTAGAAGCTTTTCTCAAACAGCAGTACCTCAATACCCCCTTGTTGCGACA
ATCAGCAACAGCAGCATATAGGGGAACTTGGTGTCTAGCTTGTTCTCAAA
CCTGTTGATGGAAGATATCACCGCACAGAAGGCCAAAATCCAGCATGCTG
AAGGGATTTAACGACGTGTCACGAGCGGGCACTCGCATTCAGGAAACCCA
TGTACATGTTTGGACACACTTTCACGATGCGTTTCTTGTCTACAGTTGTA
ACGACCGCCGTCGATTCCAACCTTCACTACCATGACACGTACAAACAAAA
TTATAACATATCCCCCGTGAGTCCTGCTTTGGAGAACCCCGTGTTTGATT
CTGAATGTTTTGTCTTGGTATCAATGTCAAAAGGTTTTCCCTGTCAACGC
AGGGTAAGCCTTCACAGACTGTACAGCAGCAACGCCAATACTCTTGTCAA
TCTGAGTCGGAGATACTGTTTCTATCGTTCTTGTAGTTGTGATATGACCT
TTGTGAATGCATCCTGTGAATCGTGAAAACACCCTTCCAGGCGGACAAGA
AGGCTAAGGAGGTTAAGGTGGAGGAGAGGGTCACCCTCGGCCCCAAGGTT
GCGGAGGGAGAGAACGTCTTCGGCGTCGCGCACATCTTCGCCTCGTTCAA
CGACACCTTTGTGGTGAGTACCGGTTCATCCTTTGATACTTCAATATTGC
ACCTCCTGGTAGAAGTGGTGAAAGGCCAGAGATAAACCTAGTTTTGCTGT
CCGCGTGTCGAACAATGTCCTCGGATTCTGACCCTGGATAGTAAAGTGAA
CAACCAACGCGGCTTCGGCGTTTTTGGAAGTATGTCAGCTTGGCTGTTCC
TGAGTGCAAATGTTGACCGCTGTGCAACAGTGTCTCGCTCCCTGGTTTCT
CGCGTGTGCAGATCTTGTGTTGTTCCGCTACAAGTACCTCCACCAACTGT
ATTAGTGCGGTGCAGGAAGTTCAAACAACGAAGGCATGGTATCCGCTTTT
GGGGGGCATCCTATCATACGATGGCACAGCGGTCGGGTCCTGAACGGTAT
CAACCTCGGCCACCTTGACGGGTATCAGCCACCCCGTCGACACCTGAACT
GCGAAAGAGAGGAGACACCGCTCACTGACGTATCCTCAGCGGTTCGGAGA
AAGATGTGGTCAAGTGAAAACATGAACAAAATCACAATGTGGCTCAAGCA
AAAAGAAGACAAAAAAATTAACTCGATTAGGATGTGTCGCTTTATGTCGG
GGTGCGCAAAGTGGACACTTCACGCCCATCAAGATTGATTTTTGTCGGGC
GTCGACGATGAAAGTTCGACTTATTCCCTCTCTGTATGAATCAACTTGAA
ATTGTGTTGGTGTACAGCCTACATATTACCCTCCAAACCGTTGCATCTGC
GTGTCCATTGTAAAGGCAGAGACAGATGTACACACGGAATGGTTGGCAAT
ACAAAATTGCCAAAGATCTGTGCATGGGTGTGGGGGTATCATTTCGTCCA
AACCCAGCTGGACGGCTCACGCATGACTTTTCTGCACAAATATACCCGCA
TCGCACGCACACGACGAGTGGGCCTCAATCTTTACCCGTGCTGAGCATAA
CATTCATTGGTCAGTAGATGCTGCGGCCTTGACCCAATTGTTTACTTATT
CCAATGTATCAAACCTGGTCACGTTGCGCAATACTCCCGGGTTCACTGCC
CTCAACCCCGTCGTGGCGCCTCTTGTGTTTTCTTTATCCCTGATGCTGTC
TTCCATGTCATGCGTGTGCAGCACATCACCGACCTGTCGGGCAGGGAGAC
TATGGTCCGCGTGACCGGCGGAATGAAGGTTAAGGCTGACCGTGATGAGG
CATCCCCGTACGCGGCTATGCTTGCCGCACAGGACGTGGCTGCCCGTTGC
AAGGTGAGCAGTCGGTTTTGTGTCGCCCACGCTTTTGAGTAAAAACGTTG
CACCTGGAGCTCATCACACAGGTGCACACGAGCTCTGTGATGCGTCGATC
TAGCTTGTGGTTATGACCCTCAAGCAGTAACGGTAGGCCTTGCACGTGCC
CAAGGCGCTTAGTAGTTTATCCTTGGGCACGCTCGTTGGAGTCAATGCAC
CGGTATGTGCGCCCTTCGTGTTCATGTAGTATTTCTGTGGAGGGGGATTT
GGGTTATTGACGTACAAGCGCTTTGGTTCCACTTGGATTTTCCTACTTGG
CTTCCGTGGTTCGAAAATGTACATCTCCTGATTGCCTGGGTTTCTGCTAT
CTTGCATAGCGGCTTGATTTTCCGACAACACCTACTGTCGGCGACCGAGC
CCGGGATGAGTTTGCGCAGTGTTGCATACGATTTTTAGTAATACCGCAAG
GTTTTGAAGTCGAAGGTTTCGCTTGTAGACATTCTTTGGCGGAAAGGCAG
CACTCGAAGACTAGGAGGCCGAAACAAGGCTATCGTGGCCATCGTGTAGT
CCCCTTGAATGAGAGACGAATGTTTCCGGCCGGATATTCCATGCCCGTCA
TCATGCCAACCATTTTTTTTGTGCCATTACTGGGATTTGACGCCACCATT
TCTGACGCCGGCTCTTTGTCACGACGTTTTCATTCGCTCATGTGGCATGA
CATGGCGTGCAGGAGCTGGGCATCACCGCCCTGCACATTAAGATGCGTGC
CACGGGTGGAAACAAGACCAAGACTCCCGGCCCCGGCGCACAGTCCGCCC
TTCGCGCTCTGGCTCGTGCAGGCATGAAGGTGAGGCGATTTTCGTCGATT
CGGGTGAAGCGTGAGAGAATCAAGCACTTGCTTGCGTGTCTGCCGGCTGC
ACTTTGCGTGTCCGGTCAACTTTCACTAGGCAGTCAGCGCTCGTCCAGTA
GTGTTCATACTTCGTGGACAAGATGGCCGTTAACGACCCGTGACTGGTTA
AAGCTGCGGTCTGTTTCCCCGACAACGAGCGTTACACGCGCCCGGCGCAG
CCGCGTTCGTGGCCAGTGTCTGCCACCAAGGCCCTCCGTTGGTCGTTCCT
GAGGGTCAGGGCTAGGGTTGAGTTGGGTCGGGCTGGTGTGTGTGATGGTA
AGCGCGCGTAGTTCAAGTTTCACCACTACCAGGCTGGAAGATCCTGCAAC
ATCAGCGTGTCGTGTCGCCCCTGTCTAAAATCAGAGCAACCTCTTTTTTA
GCGCCGAAGGCCTGGAGGCGTTCCTTGCGTTGCTTTGCAAAAAAATATCC
CACAAGGAAGACTTTGACAGTAGCGTTTGTATGTTTCCTTTACCCCGACC
CGTCCCCTCTCCCGCCTACCCTGCTCTTCTCACCAATCCATTTCAGATTG
GCCGCATTGAAGATGTGACCCCGATCCCGACTGACTGCACCCGCCGGAAA
GGTGGTCGCCGTGGTCGCCGTCTCTAACACCAAACCGAACGTTTCGCCAC
CACGGGCAGTCGTTTGTGCGCATGTGCTCGGCTGCGGGGCTCGGTCCCTG
CCGGCCTTTCAGATTTTGGCGTGGCTTGTTCTAGGCGCATTGCACAGCAG
TCGCTTCTGTTGTGGTTTTTCGCGATTAGATAATGCGCGCACATCATGCG
TGTTAATTGCTTAGCCTCAGCCGTCTTGTTTTTTGCGGGGAAATGAGGTG
CGCACATGGTACGGGTTATTGCCTAGCCTTAGCCGTCGCCGTGCAGTGTG
AGTGGTCGCCTTTGCCTGCTTTCAGGCTTCGCCGGCGTGGGTTTCTAGTA
GAGCCAACTACCCGCAAGGCTGACAAAAAAATGGAAAGAGGAAGCCAACC
AAAAACATACAAATACAGTGGAACAGACAAGGTATGACGACTTCTACGCG
CTGCGCTGATGTGCATGGACCCTCTTGTTCGCGCTCTTTGATGGCATTTT
AGTGCGCACAAATCCGCCTGTTTTCTGCAAACAAATATATTCAGATCGGT
TCGTCAAGAAACACAAATCCAACTCAGATACGGGTGTTGCGCGAACATCA
AACATTCAACAACGGAAGATATGGCTTGGCACAATATCAAACTCAGCACG
TCACCCTGCCACACG
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Coding sequence (CDS) from alignment at P-littoralis_Contig174:199413..204327-

>mRNA_P-littoralis_Contig174.42.1 ID=mRNA_P-littoralis_Contig174.42.1|Name=mRNA_P-littoralis_Contig174.42.1|organism=Pylaiella littoralis U1_48|type=CDS|length=300bp|location=Sequence derived from alignment at P-littoralis_Contig174:199413..204327- (Pylaiella littoralis U1_48)
ATGGTCCGCGTGACCGGCGGAATGAAGGTTAAGGCTGACCGTGATGAGGC
ATCCCCGTACGCGGCTATGCTTGCCGCACAGGACGTGGCTGCCCGTTGCA
AGGAGCTGGGCATCACCGCCCTGCACATTAAGATGCGTGCCACGGGTGGA
AACAAGACCAAGACTCCCGGCCCCGGCGCACAGTCCGCCCTTCGCGCTCT
GGCTCGTGCAGGCATGAAGATTGGCCGCATTGAAGATGTGACCCCGATCC
CGACTGACTGCACCCGCCGGAAAGGTGGTCGCCGTGGTCGCCGTCTCTAA
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