prot_P-littoralis_Contig174.35.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig174.35.1
Unique Nameprot_P-littoralis_Contig174.35.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1128
Homology
BLAST of mRNA_P-littoralis_Contig174.35.1 vs. uniprot
Match: D7FYS2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYS2_ECTSI)

HSP 1 Score: 454 bits (1169), Expect = 6.350e-142
Identity = 339/669 (50.67%), Postives = 399/669 (59.64%), Query Frame = 0
Query:  452 EFQGTRHALSRLKEIVAHEWTQQEYRAGIALGQVDPGVTDLEYTRRRLESGSLYALLEEESRDYLRAGVFADADMELLGKGFAQVQADKKLAPKSGEVAAEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAR-------------GEASWADRLRDFQMDIPASAAYNEPTSNSEEGAXXXXXXDGVDVGAEQDVVTAQQG--EEEDDPVTWDGVGVDAATVILNRKQFDIRCKAYEGLNNVSSDVKTNVLLEKTHRLHHDHATIITAKRRTLEGTLHNVRQQLNGREEQLRHLRIGQSGANPHDAAMLANLKESEAAVMARVTEKKVQMDMIVEEANKVVQWERTMDLARREAMQHAADMHGHGEAFTAGAQPERNELVQAMMSQKVNIMLLSTFCKLRGPWLAPRGYVRINHPAPNAAPDDAA---------PGENTVVSAITGASISSSTDTSVPVSAARDQVSPRSSTNGSVEEE------------------GRTSISSSPTNAARGXXXXXXXXXXXXXXXXNPEKKQIKLKLLPPIEAGRRTEESIDDSAPPA--DLAGRKGE---------VGKGVDEAADDAASRLADRSDP--SSIAVVVTTGGGKEAAMARLAGTRGAVT----EGVNDDYVVSNGLAAMDVAVPTVSSPAGG 1061
            EFQGTR+A SRLK+ +AHEW +QEYR GIALGQVD G+T++E+ RRR+E GSLYALLE+ESRDYLR G F DAD+ELLG  FAQ QA K+L P +     +  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +             G ASWADRLRDFQ+DIPASA Y+   S+S  G       DG  V        AQ+G  ++EDD   WDG+GVDAATVI +R+QFD+RC+AYE LN  S + KTN LLEKTHRL  DHA I+ AKR TLEGTL NVRQQLNGRE+QLRH+ + Q G NP D  ++A L ESEAA+M RV EKKVQM MI++EANKVVQWE+T +LARREAM HAADMHGHG  F  G+  ERNELVQ+MMSQKVNIMLLSTFCKLRGPWLAP GYVR      + A   A          P   T V +    S+S++ +T+                                         G     S P               XX      P K+QIKL+LLPP EA  + E+   D    A     G++ E          G     AA+  ASR  D S    SS+A V+  GG KEAAMA LAG RG  +    +GV+      +G A MD    T S   GG
Sbjct:    7 EFQGTRYARSRLKQTLAHEWARQEYRTGIALGQVDRGMTEMEFVRRRVEGGSLYALLEQESRDYLRVGPFTDADVELLGMSFAQAQASKELPPPAAAPKPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGKDAAAAKAGAAAEGGVASWADRLRDFQIDIPASATYDGLASDSSRGGGAADRTDGQVVAE-----AAQKGGSQQEDDASAWDGIGVDAATVIRHRRQFDLRCRAYEALNTASRNDKTNGLLEKTHRLRQDHAAIVAAKRVTLEGTLQNVRQQLNGREDQLRHVHMEQRGVNPLDTTVVAGLNESEAAIMTRVAEKKVQMAMIIDEANKVVQWEQTAELARREAMHHAADMHGHGGGFAPGSAKERNELVQSMMSQKVNIMLLSTFCKLRGPWLAPSGYVRGKRSVSDGAAGSAVAAAEEKGAEPDPRTAVVSSPSLSVSTAENTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNDGAGSGPA------------AGXXAGVEAKPGKRQIKLRLLPPSEAEPKKEKGDGDPGQDAHRQQPGQQAEGGGDAGAACTGPSYTVAAEGTASRAGDSSGDGFSSMAAVMAMGG-KEAAMASLAGARGTGSVREQDGVDAGSKGGDGPAPMDATASTASGNEGG 657          
BLAST of mRNA_P-littoralis_Contig174.35.1 vs. uniprot
Match: A0A6H5KV99_9PHAE (PDZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV99_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 2.100e-38
Identity = 77/98 (78.57%), Postives = 86/98 (87.76%), Query Frame = 0
Query:    1 MDMARVSQDP--RAGQQKQQQQQWDRFEVVLSKPSGRQKLGMILKHAQIVGEDRLKRGAYLAGLAEGPSVAQDLGLTPKDRLVLVEGLDVKLLPFDRI 96
            MD A   +DP  R+  Q+ QQQQWDRFEVVLSKPSG QKLGM+LKHAQ+ GE+RLKRGAYLAGLAEGPS+AQDLGL+PKDRL+LVEGLDVK LPFDRI
Sbjct:    1 MDTAGAVEDPAQRSSGQQPQQQQWDRFEVVLSKPSGSQKLGMVLKHAQVCGEERLKRGAYLAGLAEGPSLAQDLGLSPKDRLILVEGLDVKTLPFDRI 98          
BLAST of mRNA_P-littoralis_Contig174.35.1 vs. uniprot
Match: D7FYS1_ECTSI (PDZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYS1_ECTSI)

HSP 1 Score: 149 bits (376), Expect = 3.070e-38
Identity = 73/88 (82.95%), Postives = 80/88 (90.91%), Query Frame = 0
Query:   40 MILKHAQIVGEDRLKRGAYLAGLAEGPSVAQDLGLTPKDRLVLVEGLDVKLLPFDRIVGLIRNATFPLTLVWSRQRKAGVATKLPGTA 127
            M+LKHAQ+ GE+RLKRGAYLAGLAEGPS+AQDLGL+PKDRL+LVEGLDVK LPFDRIVGLIR ATFPLTLVWSRQRKAG+A    G A
Sbjct:    1 MVLKHAQVFGEERLKRGAYLAGLAEGPSLAQDLGLSPKDRLILVEGLDVKTLPFDRIVGLIRKATFPLTLVWSRQRKAGIAATSKGRA 88          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig174.35.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FYS2_ECTSI6.350e-14250.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KV99_9PHAE2.100e-3878.57PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FYS1_ECTSI3.070e-3882.95PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 774..794
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 608..635
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 302..341
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1073..1094
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 884..928
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 951..989
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 213..260
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 884..930
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..436
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 126..174
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 343..381
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 553..575
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 25..110
e-value: 5.62555E-6
score: 43.7095
IPR036034PDZ superfamilyGENE3D2.30.42.10coord: 4..120
e-value: 1.0E-7
score: 33.7
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 21..115
IPR001478PDZ domainPROSITEPS50106PDZcoord: 26..115
score: 11.0589

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig174contigP-littoralis_Contig174:182689..193164 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig174.35.1mRNA_P-littoralis_Contig174.35.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig174 170060..193510 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig174.35.1 ID=prot_P-littoralis_Contig174.35.1|Name=mRNA_P-littoralis_Contig174.35.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1128bp
MDMARVSQDPRAGQQKQQQQQWDRFEVVLSKPSGRQKLGMILKHAQIVGE
DRLKRGAYLAGLAEGPSVAQDLGLTPKDRLVLVEGLDVKLLPFDRIVGLI
RNATFPLTLVWSRQRKAGVATKLPGTAVRQQGSTTATATATTTVDSSSPP
ASPPAATTAATSPPTSTVANGSPFEKPSCNAAVSEDWSLATSRSHATSRG
VREAEEGTGRGHPRFSSTGSNGTTVHEERQQMQRAPIGGPMQQQQQQQQQ
RDSSGNCFGHLSGTAGGGVADGLSHQGIPTTTPDIVGRWLPTSPGVREMR
MAMSFQQQQHLLQEQREGYMRNSSNNNNNNNNNNNNDNDNYGGPVARRRE
RQQARRDKARKHETTTYFPRKQRHDPAGLDRGVGVDDGNGGGGGSISSKG
SRRGRAGARGSRGRGRSAAAASAVAGSGGAGGEETAPSPEWLHCLVQAEV
GEFQGTRHALSRLKEIVAHEWTQQEYRAGIALGQVDPGVTDLEYTRRRLE
SGSLYALLEEESRDYLRAGVFADADMELLGKGFAQVQADKKLAPKSGEVA
AEAAAAAPSSSKTTGAGKDKATKSRSTKAKAAAAVAARGEASWADRLRDF
QMDIPASAAYNEPTSNSEEGAGAGAGGDGVDVGAEQDVVTAQQGEEEDDP
VTWDGVGVDAATVILNRKQFDIRCKAYEGLNNVSSDVKTNVLLEKTHRLH
HDHATIITAKRRTLEGTLHNVRQQLNGREEQLRHLRIGQSGANPHDAAML
ANLKESEAAVMARVTEKKVQMDMIVEEANKVVQWERTMDLARREAMQHAA
DMHGHGEAFTAGAQPERNELVQAMMSQKVNIMLLSTFCKLRGPWLAPRGY
VRINHPAPNAAPDDAAPGENTVVSAITGASISSSTDTSVPVSAARDQVSP
RSSTNGSVEEEGRTSISSSPTNAARGGDGSSSAAAAAAAAAANPEKKQIK
LKLLPPIEAGRRTEESIDDSAPPADLAGRKGEVGKGVDEAADDAASRLAD
RSDPSSIAVVVTTGGGKEAAMARLAGTRGAVTEGVNDDYVVSNGLAAMDV
AVPTVSSPAGGVVGGMEGEEDVVGRATGSSDSGGSSVPEAGKAQDPVPYA
CGLSACAGDGPGGAAGVEVSKEGDGMP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036034PDZ_sf
IPR001478PDZ