mRNA_P-littoralis_Contig174.29.6 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig174.29.6 vs. uniprot
Match: A0A6H5LB87_9PHAE (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LB87_9PHAE) HSP 1 Score: 741 bits (1912), Expect = 4.430e-261 Identity = 415/560 (74.11%), Postives = 437/560 (78.04%), Query Frame = 2
Query: 134 MSRLSVPVHVEVSLLPTCTAEDAHIREETLNLLSGGRYILRDGPVDFASSVLLSQSVKSVAVVDMDDPLPSGVSFWQGDFRVHTYRLSHEGAEQEMIEGAGEEEEIAACDQWILPAASLEGVWESLVLEQGVKNHLLEYATSALLFTDKGVRKNVISWNRVVLLHGPPGTGKTSLCKALAHKLSIRLGDRYSSGQLLEINAHSLFSKWFSESGKLVQRLFEHILELADDEDSLVCVLVDEVESLTAARSAAMGGNEPSDAVRVVNAVLTQIDNLRERDNVLVLTTSNVSEAIDLAFVDRADIKQYIGLPTAPARYQVLHSCLEELVRVGIISPPFYLPPSFSKAVELTSASPLSSSSPAAAPTASSPSPPLVPPRGSTTGQGVAGVRGXXXXXXXXXXXXQKGSRGISSDG-WDNGXXXXXXXXXGESSRRDLVSGNXXXXXXXXXXXXVSSGNGVAKVDCRED-----VVMDGVGVGELGVGGGGPPRVRTGLHAAAEGLLNIARLAEGLSGRALRKLPFQAHAFYVQRQSCTLTEFLSAMTRAVHKELGDRRSLETHR 1795
MSRLSVPVHVEVSLLP CT DA IREETLNLLSGGRYI++DGPVD ASS LLSQ KSVAVVDMDDPLPSGVSFWQGDFRVH YRLSHE EQEMI+GAGEEEEIAACDQW+LP+ASLEGVWESLVLE+GVKNHLLEYATSALLFTDKGV KNVISWN+VVLLHGPPGTGKTSLCKALAHKLSIRLGDRYS+GQLLEINAHSLFSKWFSESGKLVQRLFEHILELADDEDSLVCVLVDEVESLTAARSA+MGGNEPSDAVRVVNAVLTQIDNLRERDNVLVLTTSNVSEAIDLAFVDRADIKQYIGLPTAPARYQVLHSCLEELVRVGIISPP +L PS+SKAVELT+ + XXX ++G G S G W+NG G+ R + +G GN V D VVMD GV GGG P++RTGLHA AE LL +ARLAEGLSGRALRKLPFQAHAFYVQRQSCTL EFLSAMTRAVHKELGDRRSLETHR
Sbjct: 1 MSRLSVPVHVEVSLLPACTVGDARIREETLNLLSGGRYIIKDGPVDLASSPLLSQCAKSVAVVDMDDPLPSGVSFWQGDFRVHIYRLSHEEPEQEMIDGAGEEEEIAACDQWVLPSASLEGVWESLVLERGVKNHLLEYATSALLFTDKGVSKNVISWNKVVLLHGPPGTGKTSLCKALAHKLSIRLGDRYSTGQLLEINAHSLFSKWFSESGKLVQRLFEHILELADDEDSLVCVLVDEVESLTAARSASMGGNEPSDAVRVVNAVLTQIDNLRERDNVLVLTTSNVSEAIDLAFVDRADIKQYIGLPTAPARYQVLHSCLEELVRVGIISPPSHLQPSYSKAVELTAGAXXXXX--------------XXXXXXXXXXXXXXXXXXXXXQPASGEDTSRRGCGGSLSAGLWENGEGG------GDGGREQVANGG---------------GNSNGAVGLEPDGGGAVVVMDTDGV------GGGAPQIRTGLHAGAEALLEVARLAEGLSGRALRKLPFQAHAFYVQRQSCTLAEFLSAMTRAVHKELGDRRSLETHR 519
BLAST of mRNA_P-littoralis_Contig174.29.6 vs. uniprot
Match: A0A835Z7T2_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7T2_9STRA) HSP 1 Score: 450 bits (1157), Expect = 6.010e-148 Identity = 269/550 (48.91%), Postives = 326/550 (59.27%), Query Frame = 2
Query: 149 VPVHVEVSLLPTCTAEDAHIREETLNLL-SGGRYILRDGPVDFASSVLLSQSVKSVAVVDMDDPLPSGVSFWQGDFRVHTYRLSHEGAEQEMIEGAGEEEEIAACDQWILPAASLEGVWESLVLEQGVKNHLLEYATSALLFTDKGVRKNVISWNRVVLLHGPPGTGKTSLCKALAHKLSIRLGDRYSSGQLLEINAHSLFSKWFSESGKLVQRLFEHILELADDEDSLVCVLVDEVESLTAARSAAMGGNEPSDAVRVVNAVLTQIDNLRERDNVLVLTTSNVSEAIDLAFVDRADIKQYIGLPTAPARYQVLHSCLEELVRVGIISPPFYLPPSFSKAVELTSASPLSSSSPAAAPTASSPSPPLVPPRGSTTGQGVAGVRGXXXXXXXXXXXXQKGSRGISSDGWDNGXXXXXXXXXGESSRRDLVSGNXXXXXXXXXXXXVSSGNGVAKVDCREDVVMDGVGVGELGVGGGGPPRVRTGLHAAAEG--LLNIARLAEGLSGRALRKLPFQAHAFYVQRQSCTLTEFLSAMTRAVHKELGDRRSLET 1789
VPVHVEV+L P+C E + I +E L+ GG +RDGP+D ++S +LS++V + V + D V FW D VH ++LS G E+E+++G G+ E++AA DQW+LPA LEG+WESL+LE +K LL+YATSALLF+D+ V K++ISWNRVVLLHGPPGTGKTSLCKALAHKL+IRLG R+ + QLLEINAHSLFSKWFSESGKLV RLF HI ELA+DE +LVC+LVDEVESLT ARSAAM GNEPSDAVRVVNAVLTQID+LR RDNVLVLTTSNVS+AIDLAFVDRADIK IGLP ARY +L SCL EL+R GII PP ++P S +LV G G ++ ++ VG+ TG + G LL +A LA+GLSGRALRKLPFQAHAF+V R S TL +L A+ +AV EL R LET
Sbjct: 7 VPVHVEVALQPSCALEFSEIEQEVRRLIHGGGSTTIRDGPIDVSTSRVLSENVLTAKVTGLTDSGVDKVPFWHCDPCVHAFQLSPCGVEREVLDGDGDGEDVAAFDQWVLPAQELEGLWESLLLEDTIKAQLLDYATSALLFSDRQVSKHIISWNRVVLLHGPPGTGKTSLCKALAHKLAIRLGGRFQAAQLLEINAHSLFSKWFSESGKLVGRLFGHIAELAEDESTLVCILVDEVESLTTARSAAMSGNEPSDAVRVVNAVLTQIDSLRARDNVLVLTTSNVSKAIDLAFVDRADIKMLIGLPGVQARYSILQSCLAELMRTGIIDPPQHVPDCAS----------------------------------------------------------------------------------------ELVRTALHTSCDMGVLAPARIGEGFIQLSYFGVLLFKTVGMSSA-----------TGCRVMSMGILLLQVAALAQGLSGRALRKLPFQAHAFFVHRSSTTLHHYLDALLQAVRTELQRRAQLET 457
BLAST of mRNA_P-littoralis_Contig174.29.6 vs. uniprot
Match: A0A7S3XXY1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXY1_HETAK) HSP 1 Score: 403 bits (1035), Expect = 2.590e-131 Identity = 208/332 (62.65%), Postives = 255/332 (76.81%), Query Frame = 2
Query: 149 VPVHVEVSLLPTCTAEDAHIREETLNLLSGGRYILRDGPVDFASSVLLSQSVKSVAVVDMDD-PLPSG--VSFWQGDFRVHTYRLSHEGAEQEMIEGAGEEEEIAACDQWILPAASLEGVWESLVLEQGVKNHLLEYATSALLFTDKGVRKNVISWNRVVLLHGPPGTGKTSLCKALAHKLSIRLGDRYSSGQLLEINAHSLFSKWFSESGKLVQRLFEHILELADDEDSLVCVLVDEVESLTAARSAAMGGNEPSDAVRVVNAVLTQIDNLRERDNVLVLTTSNVSEAIDLAFVDRADIKQYIGLPTAPARYQVLHSCLEELVRVGIISPP 1135
VP+HVEV+ L E I+E+ LL+ + +GP+DF+SS L +V S+ + D+D+ PL VSFW+ +H Y+L EG EQEM++G EE++ A +QW LPA L G+W SLVLE GVK L+EYA +ALLF+DKGV +++WNRVVLLHGPPGTGKTSLCKALA KL+IRL DRY+ LLEINAHSLFSKWFSESGKLV RLF+HI EL +DE+SLVCVL+DEVESLTAARS+A+GG+EP DAVRVVNAVLTQ+DNLR+R NVLVL TSN+S AID+AFVDRADIKQY+GLP A AR+ +L CL EL+R G+ PP
Sbjct: 5 VPIHVEVNQLEDSVEEPEAIKEKVEALLNEAYPVFTEGPIDFSSSQYLQSNVASIRICDLDECPLVGDGPVSFWRATIFLHVYQLCEEGPEQEMVDG---EEDLPALEQWALPARELHGLWGSLVLEHGVKRDLVEYAQAALLFSDKGVDPALVTWNRVVLLHGPPGTGKTSLCKALAQKLAIRLSDRYNDTHLLEINAHSLFSKWFSESGKLVMRLFQHIQELVEDEESLVCVLIDEVESLTAARSSALGGSEPGDAVRVVNAVLTQLDNLRKRPNVLVLATSNLSSAIDIAFVDRADIKQYVGLPPARARHAILRGCLAELMRAGLAHPP 333
BLAST of mRNA_P-littoralis_Contig174.29.6 vs. uniprot
Match: A0A8K1CN28_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CN28_PYTOL) HSP 1 Score: 361 bits (926), Expect = 1.220e-113 Identity = 224/548 (40.88%), Postives = 296/548 (54.01%), Query Frame = 2
Query: 155 VHVEVSLLPTCTAEDAHIREETLNLLSGGRYILRDGPVDFASSVLLSQSVKSVAVVDMD-----DPLPSGVSFWQGDFRVHTYRLSHEGAEQEMIEGAGEEEEIAACDQWILPAASLEGVWESLVLEQGVKNHLLEYATSALLFTDKGVRKNVISWNRVVLLHGPPGTGKTSLCKALAHKLSIRLGDRYSSGQLLEINAHSLFSKWFSESGKLVQRLFEHILELADDEDSLVCVLVDEVESLTAARSAAMGGNEPSDAVRVVNAVLTQIDNLRERDNVLVLTTSNVSEAIDLAFVDRADIKQYIGLPTAPARYQVLHSCLEELVRVGIISPPFYLPPSFSKAVELTSASPLSSSSPAAAPTASSPSPPLVPPRGSTTGQGVAGVRGXXXXXXXXXXXXQKGSRGISSDGWDNGXXXXXXXXXGESSRRDLVSGNXXXXXXXXXXXXVSSGNGVAKVDCREDVVMDGVGVGELGVGGGGPPRVRTGLHAAAEGLLNIARLAEGLSGRALRKLPFQAHAFYVQRQSCTLTEFLSAMTRAVHKELGDRRSL 1783
VHVEV L A IR L I G + F LL Q V+ + V ++D D GV W+ VH ++LS E +E E +++ ++ C Q LPA L+G+WESL+ + VK ++LEYAT+A+LF+D V ++ISWNRVVLLHGPPGTGKTSLCKALA KLSIRL DR+ + LLEINAHSLFSKWFSESGKLV +LF I EL +DE++L+CVL+DEVESLTAAR AA+ G+EPSDA+RVVNA+LTQ+D L+ NVLVLTTSN++EAID+AFVDRADIKQYIGLP+ ARY++L SC+EEL RVG+I +G +K +S++ + + NG + D ED+V+ + LL +A AEG SGR+LRKLPFQAHAF+VQ ++ T+ +F+ +++R V E+ ++ L
Sbjct: 20 VHVEVCLKAASVAGYEEIRGVVCEYLQHNTSIFTKGTIHFNDVELLVQHVEHMHVTEIDSSDEEDAQNEGVPHWEAHVIVHVFKLSDEPPAEETAE---DDDNVSTCQQLALPATMLDGLWESLIYDTTVKRNVLEYATTAMLFSDSKVNPHIISWNRVVLLHGPPGTGKTSLCKALAQKLSIRLADRFPNSYLLEINAHSLFSKWFSESGKLVMKLFRQIQELVEDEEALICVLIDEVESLTAARKAALSGSEPSDAIRVVNALLTQLDALKNHPNVLVLTTSNITEAIDVAFVDRADIKQYIGLPSPHARYEILRSCVEELCRVGLI-------------------------------------------------------QGSSQTLLTYRELQRK-----------------------RASKKRVAD--------------QMASNGTFEGD--EDLVV-------------------------SSALLRVAESAEGFSGRSLRKLPFQAHAFFVQARTTTVIDFIQSLSRTVRHEIEQKQQL 445
BLAST of mRNA_P-littoralis_Contig174.29.6 vs. uniprot
Match: A0A7S1EFY0_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EFY0_HEMAN) HSP 1 Score: 358 bits (920), Expect = 5.510e-113 Identity = 190/335 (56.72%), Postives = 240/335 (71.64%), Query Frame = 2
Query: 149 VPVHVEVSLLPTCTAEDAHIREETLNLLSGGRYILRDGPVDFASSVLLSQSVKSVAVVD--MDDPLPSG-VSFWQGDFRVHTYRLSHEGAEQEMIEGAGEEEEIAACDQWILPAASLEGVWESLVLEQGVKNHLLEYATSALLFTDKGVRKNVISWNRVVLLHGPPGTGKTSLCKALAHKLSIRLGDRYSSGQLLEINAHSLFSKWFSESGKLVQRLFEHILELADDEDSLVCVLVDEVESLTAARSAAMGGNEPSDAVRVVNAVLTQIDNLRERDNVLVLTTSNVSEAIDLAFVDRADIKQYIGLPTAPARYQVLHSCLEELVRVGIISPPFYL 1144
VPV+VE L + A A + E + + +DG VDF+ L Q++K++AV D M +G V WQ +V ++ S EG +E E + +C+ W LPA +W++LV + VK+HLLEYATSA+ F DKGV +V+SWNRVVLLHGPPGTGKTSLC+ALA KLSIR+ DR+S GQL+E+NAHSLFSKWFSESGKLV +LF I EL DD V VL+DEVESLTAAR +A+ GNEPSDA+RVVNA+LTQID L++ NV+V+TTSN++EAIDLAFVDRADIKQYIGLP+ ARYQ+L SC++EL+RV II+PP L
Sbjct: 10 VPVYVEAETLASSRAARADLLERVGHFMVSSMSSYKDGAVDFSGDEFLRQNLKALAVTDLVMGGKTANGEVPLWQAALQVRLFQCSDEGVCEET------EGDTTSCNIWTLPAVEFRDLWDTLVYDSEVKSHLLEYATSAMYFADKGVNASVVSWNRVVLLHGPPGTGKTSLCQALAQKLSIRMSDRFSFGQLVEVNAHSLFSKWFSESGKLVNKLFATIQELIDDPQCFVVVLIDEVESLTAARKSAVNGNEPSDAIRVVNALLTQIDQLKQFKNVMVMTTSNITEAIDLAFVDRADIKQYIGLPSPAARYQILASCVQELMRVSIINPPVLL 338
BLAST of mRNA_P-littoralis_Contig174.29.6 vs. uniprot
Match: UPI0010FCA30A (pachytene checkpoint protein 2 homolog n=2 Tax=Acropora TaxID=6127 RepID=UPI0010FCA30A) HSP 1 Score: 355 bits (912), Expect = 7.230e-112 Identity = 192/337 (56.97%), Postives = 238/337 (70.62%), Query Frame = 2
Query: 137 SRLSVPVHVEVSLLPTCTAEDAHIREETLNLLSGGRYILRDGPVDFASSVLLSQSVKSVAVVDMDDPLPSGVSFWQGDFR-----VHTYRLSHEGAEQEMIEGAGEEEEIAACDQWILPAASLEGVWESLVLEQGVKNHLLEYATSALLFTDKGVRKNVISWNRVVLLHGPPGTGKTSLCKALAHKLSIRLGDRYSSGQLLEINAHSLFSKWFSESGKLVQRLFEHILELADDEDSLVCVLVDEVESLTAARSAAMGGNEPSDAVRVVNAVLTQIDNLRERDNVLVLTTSNVSEAIDLAFVDRADIKQYIGLPTAPARYQVLHSCLEELVRVGIISP 1132
S+ S H+EV P TA I+E L + D S + L+Q VKSV+V D + + QG + +H ++L +G E +E E+IAA + W+LP+ GVW+SL+ + VK L+ YAT+ LLF+D+GV NVISWNRVVLLHGPPGTGKTSLCKALA KLSIRL DRYS GQL+EIN+HSLFSKWFSESGKLV ++F+ I EL DD+D+LVCVL+DEVESLTAAR +AM G EPSDA+RVVNA+LTQID+++ NVLVLTTSNV+ AIDLAFVDRADIKQYIGLP+ A + + HSC+ EL+RVGIISP
Sbjct: 13 SQASQTYHIEVLQDPYSTATSGTIKEHVRKFLLHEATVFGDTTFSEFSDIFLTQHVKSVSVCDTE----MVTNDRQGSLKNCKLAIHVFQLHDDGPATEELE-----EDIAAANHWLLPSEDFHGVWDSLIFDSDVKAQLINYATTTLLFSDRGVNSNVISWNRVVLLHGPPGTGKTSLCKALAQKLSIRLSDRYSYGQLIEINSHSLFSKWFSESGKLVMKMFQKIQELIDDKDALVCVLIDEVESLTAARKSAMQGQEPSDAIRVVNALLTQIDHIKRFPNVLVLTTSNVTGAIDLAFVDRADIKQYIGLPSVNAVFSIYHSCITELMRVGIISP 340
BLAST of mRNA_P-littoralis_Contig174.29.6 vs. uniprot
Match: A0A6A5C998_NAEFO (AAA domain-containing protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5C998_NAEFO) HSP 1 Score: 354 bits (908), Expect = 3.120e-111 Identity = 191/346 (55.20%), Postives = 248/346 (71.68%), Query Frame = 2
Query: 152 PVHVEVSLLPTCTAEDAHIREETLNLLSGGRYILRDG--PVDFASSVLLSQS-------VKSVAVVDMDD-PLPSGVSFWQ--GDFRVHTYRLSHEGAEQEMIEGAG-EEEEIAACDQWILPAASLEGVWESLVLEQGVKNHLLEYATSALLFTDKGVRKNVISWNRVVLLHGPPGTGKTSLCKALAHKLSIRLGDRYSSGQLL-EINAHSLFSKWFSESGKLVQRLFEHILELADDEDSLVCVLVDEVESLTAARSAAMGGNEPSDAVRVVNAVLTQIDNLRERDNVLVLTTSNVSEAIDLAFVDRADIKQYIGLPTAPARYQVLHSCLEELVRVGIISPPFYLP 1147
PVHVEV L P TA+ I+E L L+ R I++DG P+ + S LS+ VK + + DM+ P+ +G + G F +H ++ + E +E + G E EEI AC QW LP S +G+WESL+ + VK +LLEYA++ + F+D GV +N+ISWNRV LL+GPPGTGKTSLCK LA KLSIR+ RY SG +L EINAHSLFSKWFSESGKLV +LF+ I E+ +DE+S VCVL+DEVESLTAAR +A+ G+EPSD++RVVNA+LTQ+D+L+ NVL+LTTSN++EAIDLAFVDRADIKQYIG P+ RY +L SCL EL+RV +ISP +P
Sbjct: 7 PVHVEVCLKPQSTAKSKLIKEAVLELIINRRPIIQDGIIPMIVSESQKLSEKEEFLVKHVKQIKISDMEQHPMYNGPLLYNQDGQFSIHVFKATDEEPIEETTDDNGAENEEITACKQWSLPNDSFDGLWESLIFDNHVKYNLLEYASTTMRFSDLGVDQNLISWNRVALLYGPPGTGKTSLCKGLAQKLSIRMSHRYPSGGILIEINAHSLFSKWFSESGKLVMKLFKKIFEIVEDEESFVCVLIDEVESLTAARKSALSGSEPSDSIRVVNALLTQLDHLKRYKNVLILTTSNITEAIDLAFVDRADIKQYIGPPSVQGRYSILRSCLMELMRVSVISPSIAIP 352
BLAST of mRNA_P-littoralis_Contig174.29.6 vs. uniprot
Match: A0A8B8EU16_CRAVI (LOW QUALITY PROTEIN: pachytene checkpoint protein 2 homolog n=2 Tax=Crassostrea TaxID=6564 RepID=A0A8B8EU16_CRAVI) HSP 1 Score: 353 bits (905), Expect = 8.990e-111 Identity = 181/326 (55.52%), Postives = 239/326 (73.31%), Query Frame = 2
Query: 158 HVEVSLLPTCTAEDAHIREETLNLLSGGRYILRDGPVDFASSVLLSQSVKSVAVVDMD-DPLPSGVSFWQGDFRVHTYRLSHEGAEQEMIEGAGEEEEIAACDQWILPAASLEGVWESLVLEQGVKNHLLEYATSALLFTDKGVRKNVISWNRVVLLHGPPGTGKTSLCKALAHKLSIRLGDRYSSGQLLEINAHSLFSKWFSESGKLVQRLFEHILELADDEDSLVCVLVDEVESLTAARSAAMGGNEPSDAVRVVNAVLTQIDNLRERDNVLVLTTSNVSEAIDLAFVDRADIKQYIGLPTAPARYQVLHSCLEELVRVGIISP 1132
HVE+ L PT AE ++E LL R + D + + L ++VKSV++ D + +P + + +H YR++ +G E ++ +EE++AA W+LPA+ G+WESLV ++ +K LL YA++ LLF+DK V N+ISWN+VVLLHGPPGTGKTSLCKALA KL IRL DRYS GQL+EIN+HSLFSKWFSESGKLV ++F+ I EL DD+D+LV VL+DEVESLTAAR + M G+EPSDA+RVVNA+LTQ+D ++ NV++LTTSNV+ AIDLAFVDRADIKQYIG P+ A +++ HSC+ EL+RVGIISP
Sbjct: 23 HVEICLKPTSLAESHTVKEHVQALLGRHRVVYGDLVLTSFDDLFLQENVKSVSICDTEYNPDKKQICLASDNLILHVYRMNEDGPGTEELD---DEEDMAAAHHWLLPASDFSGLWESLVYDEDIKRGLLNYASTTLLFSDKSVDSNIISWNKVVLLHGPPGTGKTSLCKALAQKLVIRLTDRYSYGQLIEINSHSLFSKWFSESGKLVMKMFQKIQELIDDQDALVFVLIDEVESLTAARKSTMSGSEPSDAIRVVNALLTQLDQIKRYPNVMILTTSNVTGAIDLAFVDRADIKQYIGXPSPAAIFKIYHSCITELMRVGIISP 345
BLAST of mRNA_P-littoralis_Contig174.29.6 vs. uniprot
Match: A0A8B7Z480_ACAPL (pachytene checkpoint protein 2 homolog n=2 Tax=Valvatida TaxID=41166 RepID=A0A8B7Z480_ACAPL) HSP 1 Score: 352 bits (903), Expect = 2.370e-110 Identity = 186/328 (56.71%), Postives = 232/328 (70.73%), Query Frame = 2
Query: 155 VHVEVSLLPTCTAEDAHIREETLNLLSGGRYILRDGPVDFASSVLLSQSVKSVAVVD--MDDPLPSGVSFWQGDFRVHTYRLSHEGAEQEMIEGAGEEEEIAACDQWILPAASLEGVWESLVLEQGVKNHLLEYATSALLFTDKGVRKNVISWNRVVLLHGPPGTGKTSLCKALAHKLSIRLGDRYSSGQLLEINAHSLFSKWFSESGKLVQRLFEHILELADDEDSLVCVLVDEVESLTAARSAAMGGNEPSDAVRVVNAVLTQIDNLRERDNVLVLTTSNVSEAIDLAFVDRADIKQYIGLPTAPARYQVLHSCLEELVRVGIISP 1132
VHVE+ P T I++ LL R D + L + VK VA+ D +D + Q + +H ++LS+EG E + +EEIAA W+LPAA EG+W+SLV + VK+ LL YAT+ LLF+D V N+ISWNRVVLLHGPPGTGKTSLCKALA KL IRL DRYS GQL+EIN+HSLFSKWFSESGKLV ++F+ I EL DD+D+LVCVL+DEVESLTAAR +++ G EPSDA+RVVNA+LTQID ++ NVL+LTTSNV+EAIDLAFVDRADIKQYIG P+ A +++ HSC+ EL+R IISP
Sbjct: 31 VHVEICQSPCSTVHRESIKDHVTKLLHRQRVSYGDMTLTEFDDPYLKEHVKWVAICDTELDVSGKQAIDLCQSELHLHVFQLSNEGPGMEELA----DEEIAAASHWLLPAADFEGIWDSLVFDSCVKSSLLHYATTTLLFSDCKVDPNIISWNRVVLLHGPPGTGKTSLCKALAQKLCIRLSDRYSYGQLIEINSHSLFSKWFSESGKLVMKMFQKIQELIDDQDALVCVLIDEVESLTAARKSSLNGTEPSDAIRVVNALLTQIDQIKRHPNVLILTTSNVTEAIDLAFVDRADIKQYIGPPSPSACFKIYHSCINELMRARIISP 354
BLAST of mRNA_P-littoralis_Contig174.29.6 vs. uniprot
Match: W2FTB2_PHYPR (AAA domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2FTB2_PHYPR) HSP 1 Score: 352 bits (902), Expect = 3.340e-110 Identity = 222/545 (40.73%), Postives = 290/545 (53.21%), Query Frame = 2
Query: 155 VHVEVSLLPTCTAEDAHIREETLNLLSGGRYILRDGPVDFASSVLLSQSVKSVAVVDMD-DPL-PSGVSFWQGDFRVHTYRLSHEGAEQEMIEGAGEEEEIAACDQWILPAASLEGVWESLVLEQGVKNHLLEYATSALLFTDKGVRKNVISWNRVVLLHGPPGTGKTSLCKALAHKLSIRLGDRYSSGQLLEINAHSLFSKWFSESGKLVQRLFEHILELADDEDSLVCVLVDEVESLTAARSAAMGGNEPSDAVRVVNAVLTQIDNLRERDNVLVLTTSNVSEAIDLAFVDRADIKQYIGLPTAPARYQVLHSCLEELVRVGIISPPFYLPPSFSKAVELTSASPLSSSSPAAAPTASSPSPPLVPPRGSTTGQGVAGVRGXXXXXXXXXXXXQKGSRGISSDGWDNGXXXXXXXXXGESSRRDLVSGNXXXXXXXXXXXXVSSGNGVAKVDCREDVVMDGVGVGELGVGGGGPPRVRTGLHAAAEGLLNIARLAEGLSGRALRKLPFQAHAFYVQRQSCTLTEFLSAMTRAVHKELGDRRSL 1783
VHVEV L A+ + L R ++ G + L+ V + V D D D + +GV + VH ++LS E +E + +E++ C Q ILPA+S +G+W+SL+ + VK ++L+YA +A+LF+D V ++ISWNRVVLLHGPPGTGKTSLCKALAHKLSIRL RY + LLEINAHSLFSKWFSESGKLV +LF I EL +DE+SL+CVL+DEVESLTAAR +A+ G+EPSDA+RVVNA+LTQ+D+L+ NVL+LTTSN++EAID+AFVDRADIKQYIGLP+ ARY++L SC+EEL RVGI+ P S PL +K SR D GE+ DL EL + LL A +AEG SGRALRKLPFQAHAF+VQ ++ T +EF+ + + + +E + L
Sbjct: 14 VHVEVCLKQESVADYEQVGAAVAEYLGATRSLIAKGSIVLPVEFELAAHVDRIDVTDFDGDEINETGVPKSEAHLFVHVFKLSDEPPAEETAD----DEDVTTCQQTILPASSFDGLWDSLIFDSAVKRNVLDYAMTAMLFSDSKVNPHIISWNRVVLLHGPPGTGKTSLCKALAHKLSIRLSSRYPNAVLLEINAHSLFSKWFSESGKLVMKLFRQIQELVEDEESLICVLIDEVESLTAARKSALSGSEPSDAIRVVNALLTQLDSLKRHSNVLILTTSNITEAIDVAFVDRADIKQYIGLPSGHARYEILRSCIEELRRVGILKP---------------STQPL---------------------------------------FAYQELMRRKASRKRMVD-------QMTCPPGGENGNEDL----------------------------------------ELSLE-----------------LLQAAEMAEGFSGRALRKLPFQAHAFFVQTRTATASEFIHHLMQTIQREKEQNQQL 436 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig174.29.6 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig174.29.6 >prot_P-littoralis_Contig174.29.6 ID=prot_P-littoralis_Contig174.29.6|Name=mRNA_P-littoralis_Contig174.29.6|organism=Pylaiella littoralis U1_48|type=polypeptide|length=555bp MSRLSVPVHVEVSLLPTCTAEDAHIREETLNLLSGGRYILRDGPVDFASSback to top mRNA from alignment at P-littoralis_Contig174:125369..137873- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig174.29.6 ID=mRNA_P-littoralis_Contig174.29.6|Name=mRNA_P-littoralis_Contig174.29.6|organism=Pylaiella littoralis U1_48|type=mRNA|length=12505bp|location=Sequence derived from alignment at P-littoralis_Contig174:125369..137873- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig174:125369..137873- >mRNA_P-littoralis_Contig174.29.6 ID=mRNA_P-littoralis_Contig174.29.6|Name=mRNA_P-littoralis_Contig174.29.6|organism=Pylaiella littoralis U1_48|type=CDS|length=1665bp|location=Sequence derived from alignment at P-littoralis_Contig174:125369..137873- (Pylaiella littoralis U1_48)back to top |