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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 0 |
| Model size | 337 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 336 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789835.2738917-CDS-P-littoralis_Contig174:391418..391504 | 1680789835.2738917-CDS-P-littoralis_Contig174:391418..391504 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig174 391419..391504 - |
| 1680789835.2836475-CDS-P-littoralis_Contig174:398940..399190 | 1680789835.2836475-CDS-P-littoralis_Contig174:398940..399190 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig174 398941..399190 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig174.98.1 >prot_P-littoralis_Contig174.98.1 ID=prot_P-littoralis_Contig174.98.1|Name=mRNA_P-littoralis_Contig174.98.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=112bp
SSRTRLESHPGRGFRCSTCGWRFNCCLQDGRIHIRTCKGLPFQNSDSSRG
SDSDIGAENEASSAGDGLGRGGSGCSNGDFGEDARRSASSIVAAHLSPGV
GFRQGFLSLSC* back to topmRNA from alignment at P-littoralis_Contig174:391419..399190- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig174.98.1 ID=mRNA_P-littoralis_Contig174.98.1|Name=mRNA_P-littoralis_Contig174.98.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7772bp|location=Sequence derived from alignment at P-littoralis_Contig174:391419..399190- (Pylaiella littoralis U1_48)
TCCTCTCGGACTCGACTTGAGTCTCACCCTGGCCGCGGATTTAGGTGTAG
CACTTGTGGTTGGCGGTTTAACTGCTGTCTCCAGGATGGGAGGATCCACA
TCCGCACGTGCAAAGGATTGCCATTCCAAAACAGCGATTCCTCGAGAGGA
AGTGACTCCGATATCGGAGCTGAGAACGAGGCAAGCTCAGCGGGGGACGG
CCTAGGAAGAGGTGGTTCGGGTTGCTCGAACGGCGATTTCGGCGAAGACG
GTGAGTCTACATTGACGAGGGTAAAAGTCGTACTCCGAGTACAAAGTAGA
TTTACTGTACGACGGGTCTTGATCACCCAGCAGTTTTGCACTGTGTGTGT
GTGTGTGTGTTGTCATCCCATGTTCTCTGGCACACTAGTCTGCAAACTAC
AGGCTAGGCCCATCGACGGGGTCACACAGGAGGAAGGTCAACACAGGAGG
AGTTACCCCCACCTTCCTTCTGCGGTACATGCGTGAGATTTTTTCTCGCG
AGCAGGGGTCCGCGGTCCCTACCCTCGTCGGCGAAGCCGAATCTGCTTTT
TACTAACAGCATAGCCGCTTTCAAAGTAGCAAAGGAACACATTACTATTG
TTTTGCGACCAACAAAATAAAAAAAGAATCCTCGCTCCGACTCCCATGTA
CTGCCCCCCCGGTGTTGATTGTTGATTCTCACATTAGCTCACTACCGCCG
CAGTCTAGCCCGTGGTCACAAACCAGGCACATATCGTGCTAGGAGGAAAA
AAATAAAAAAATAAAATATATGGACTATGATCACCCACAGTCAAATCAGA
TACGGTACCATCTGTGGTGGTCAGAATACCAAACAAATACAGAAAAAAAT
AACAGGCTCGAAAGAAAAAACAAAAATTGGAAACAGTCCGACAAACAATA
AATAACCAAGACAAACCTCAACCATAACCAACCATATACGGAGTACTTCG
AAGTACTTCGTACATCGAACCAGGGCCCAGGGCCATGACAGACCGAGGCA
AAGGCAAACCAGGGCGATGGTCCGGTAACTAAAAGATCAATAGACGAAAG
ACAAAAAATGAAATAAAAAAGAAGAAGATACAGGGAGGGCACAAAGACTG
AGGGAGTGCATTGGTAGAGAAGCACAACAAACAGGCCGCCAAACAAAGAG
GAAGCAGGGGAACGAAAAGGGAAAAGAAGACCGGACGTACCGGAAGTCGG
GGGGGGGGGTGATAAAAATAAAATAAAAGGCATGCAATCAATCGCAAACA
TGTCTTGCCACGAGGTCTGCCTGTTCACGCTTGCTCTCCTCAGTCGCACT
CGTGCCTCCTGCTACTGGCACCACCGTACCCAGTTGTTTCTGCCCCCACG
TCTTTGGCAGCAGCTACACCACCACTCCGCCCTGCAGGTTTTCCACTCCG
GCCACCCCGTAGCTTGGCATTGGACTGCTTCTTCTTGTGCTGTGCAACTC
CAACCCCACTACCTCGCTGTCCTTGTGCCCCCCCGTACCCCTCCTCTCGT
TTATCCCCGCCATCCGTTCTCCCTCTTTTGGTCAAGGCCTGCCCCTCAGC
CGCGTCCCTCTCCCTTTTCCGTCGACGTGTCTCTAATAAGTCTCCCTCTT
TCTTGAGCCACTCGTCCGTGAACCGCCGCGCACCCTCGTCGATCCTGTCG
TACCACTCGTCAGCTCTCTCGGCACTTGCCTCCCACCCCTCCTTTTTGTC
GACCACGATGTCGAGCACTTCGAGGTCCTCCTGCATTCGCCTCAGCCAGT
CAATCTCTTGCCCCCCCAGATACCTCGCTCCCCCCTGCAATTTTCCCAAA
AGAGCAATTTTCGGGAGTCTCTCGTCTCTCATGCGCGCGACGAATCCTGC
GAAGCACAGTCGCCGCTTGCGCACGGTGGCCTCAACGCTCTCGTTGCAAC
CCGCGGTGATCAGGGCTTTGGCGTAGGAGAGGGGTCGGTCTGTTCTCTCC
CTCTATTTCCATCCGATGCAGCGAAGGAGGAAGAAGTGGTGGGCTGACCG
AAGCTTGCGGTACTCCGCTGGCTTCAGATTCCATGTGACACACCCGTAGA
GTAGGGTCTCCACGACTTCAGCTTGGAGGAGTCGTACTTTTAGTCGAAGA
GGGGCCCCCGAGCGGTCGTACATTGCCTGGCTGCTGCGCCGGAAGCAGGC
GTGCGCTCGCTGCACTCGGTGGTTGATCTCGCCCTCAATGCTACCGTCCT
CACAAACCGTACCCCCGAGATAAACAAAGTCTTTCTTCTGCTTGAAGGCC
ATCCCGGCAGCGTCGATCGTGAACGAGCACGCCTCCATCCCTTTCGCGAG
CATACACATGGTCTCTGTCTTGGGTTCTGACACCAACAGCCCAAACCGCT
CGGCCACACGCACGATGATCGACATCATCTTCTCAAGGCTCCCAGGTGAT
TGAGATACAATACAGGCGTCGTCGTCCCAGTACAGCACTTTATGTACAGG
GATTGGATACGCTAGTATCTTTGGACCAGCACCTCTCGCGCGGTCGGTGC
TGGCACCCGTCGGCGAAAAGGCCCGTAGTGTTGGTTGGATGCCTCCATAT
AGTCTCATGCCAACCTCCACTTCAGATCTTTCCTCCGGCGTTTCGAGAAG
AGCTACTTATCTGAGCGATAACAGTTTCTGTGCGATCTTGTTTTGAAATC
TTGAAATTTCTTCTTTCTTGAGAGTTTCAGACGTTCTGTGCGACTCGTAC
TTTCCACGCAAAGTACCCTATGTGGGGTGGGAGGGTGGAGTCTCAATAAC
CCGTTGCTTCTCCGTTCTGTTGCTGTCGAAGCAAAGGCAAGAGATGAGTG
AACTCTGTCTCGCATCTCTTTCCTAGATGAGGCGCATGCCTTGTCGGGAT
CAGGGGATTGTTCAGGGAACATCCTCTGAACCCTCCGCGTTTTATACGCT
AGTATCTTTGGACAAGCTCTTCTCATCAAGTAGTATGGGATCAAATAGTG
GCAGCACCTCTCGCTGTCGGTGCTAACCCCCTCCCTTACTCAACGGGCCC
TTCAGGACTAGAATGCATAGCCTCGGGCTGAAGGCGACTGTCTTCCCATA
CTCGTATTCCCTGCTCAAGCCGTGCTGAGTTTTCTCGCCGCGTATCTGAA
CTACCTGTCGGTGTGTTCACATTTCGGTCTCCACTGCTATTGCCCTCTGT
CGTTACCGAAGGCCGCCCAACCAGTTTGGGGAACCTAAAATCTCTATACA
CTGCGCTTCCGGCACCCCGGGTCATGTTCAACCCCAAAATCTCTATACAC
TGCGCTTCCGGCACCCCGGGTCATGTTCAACCCCGTCGTACCCCGTCCCG
TAACGTTCTCCCATTGCATACAAGTATACATACTCCGTACATATTTATCT
CCACGCGGTCTTGAACTCTTCTTTCAGAATGCTCGCTGCATGATGATGAT
CGTCGTGCGGGCATATCTTCCCCGTCTAGTAGTGCCTTCGATACCGCTCT
TCCTGACCGGAACGGGTGCATGGAAAATCCCCCGGTATTTCTGTTGCCAC
CGTACGCTGTTTTATTAGTAAAGTTGTCATGTGTGCCTTTGTAAGACATT
ATTGCCTACTCCTCACTGGAGTTCCGTTTTTCAAATACCCTTTCGCCATG
TCTCACCCGCGGGGAACGTTCCTGCCACGACGTACTGTTTACCTTCCGAA
TATGGCACGTACTCGAGTGCTTTTCGTCGAAACCAGATAGATAGATGGTC
TGACTCTCCATGAGCGTCCCCCCTTACTGGAAATTGAACATGAAACCACA
CATATTCGGGAGCCTCAAAATACGTTGGATCAGTGGGCGTGTAAATGCTC
CTCCCCCCGCTTTGTCATGCGAGAAGCTACGGTACCGAGATATGATAGCG
TAAATATCGCGGGTCGTTAGTTTTTCAGTCGGAGGTAAATATCGGTGGCC
ATTAGTTGCAAACCGTCTGCAACCGGGGCCACAATGGCGCACTAAGGCCA
GTGCCTGATTTGACCAGTACGCCAGACCTCTTCTTCTCCTGTGACCGCGA
GAAGGCCACAATATGTTCTTACTGGATATATTCCTACCGGTGGGATATCG
TTCCATACCGGTTTCCACCCAAGTCCCTCTCGAATGCTACTATACGACAC
GTAGTTGGTCCGCATCCATTCGTGAGTATCCCTTTACGCAGACTCTCTTC
TTGCTACGGAACAGCTTCTCAGGAACCCGTGCCAACCGCTTCGCAACCCC
GCCGCAACCCTGTATACATGTACGACGAGTCTGTACCCAATGTGGCCCTG
GCCACACGCGTCTAGTCGACACAGGAAATAAAACAACACAACACCATGCT
CTTGTCATAGTCGTGCGTCTGCCATGTTTCTTGTTACCCCTGGTCCATGT
GATCTAAGGAAGTGGGAGAAAAATCTGAAACGTACGCCACCTCGGCGCTA
TTCTGACGCTCGCTGGTGAACGTTGTTCCGTGGTCGTTCGCTCTATCCTT
GATTGCGAACTCATCAATCTGCCGTCGATTGGTTTTTGCGGTTGATGCGG
CGGGGGTTTTCGCGGTTGCATGTCTTGTCTGACCTTTCATTATTCTGCCC
GTGTGTTTGTCATAGCATGCTGGACAAACTCGTGCCCGTATCACGGAAAC
CCCTCTCGTCGAGATTTTGCCACTGTGCTCTCCGGGCCAGTGCCCCTTTT
TTCTCTTCTTGTGGTCCTCCTCCCGAGAACAACATTGATGTCGCGTGCAT
TAGGGCCTGTCGTATCGACGACACGAGCCTGGTGATTCTTATATTTTATG
GACGGCAGATAAATAAATAATCGGCTCGCCCCGGTTGATTTTGTGCCTCC
CTTCGTCAGCGTGCTTGACATTTTTTTTTTTCACATGTTGTGAATGCCCC
AGTCAAGAAGTGCGTGCTGTTTTGAATGTGATCCACTTAAAATCTACTAA
ACCAAGTGGTCCTCCGTAATGTGTGCCATTTTGATTCGTGCAATAATATA
TAAACCATCAGCAAGTAGCCTCTTTTCTCGTTTGACTCTCCTCAAGCCCG
ACCCCCCCCCCCCCGGGTTTGTGCATTATTGCTCAGAGCAGAAACTTCGG
AACACATTCTCCTACTCATTCATCTCAGGTTTCGGCTGAAAACCAATCCT
ACCTGCTGCCAGGGTTCCGTAATAGCTGACTCTATGCGCGTGATTTCTTG
TTCCCGTTTGCGTAGAAAGAAGAAAATATTTTGGCTGTCAATCTTTACGA
CGAGCTCACTTTATTATTGGTTGTATCTATCAAAGCAACGAGAATCCTTC
CTTCTCTATGTGCGTGTGTGTATATCCCTTCTGTAAAGTCGGCGGCCGTT
TCGTACGGAATGCTTGAACCCCTAGTAGTGGTATCTCCTCATCCACCGAT
GAAGCATTGGTCGCCCCGATAACTGACAGCACAGACATAGTGCCGCGCCT
TGTACCACGCCGCGCCCCGCCCCGTCCATCATTTGTTCTCCTACTTCTAA
CCAAATCAGTAGTTAGTTCGGCCATCCGCTCGCTGGTGTCGCATTCAGGG
CGCTTGGTCGCCGTCCCTCTACCGTTCCTTGCGTTGGAAGATGGCGATCT
GCTCGTACGCGTAAGCTAAAGCGTGCAAATTCATGTGGTGGCACCGCAAC
GGTCACGCTTGCGGTGCACGTTCTTGCCATTTTCCGATGGCAAACTTCAT
TGCCCCTGCTTTGATGGCATGTGCGACATCACCCCCTTCTTGTACATAGT
TCATCTACGATACAGAGTAGTTTTTCCGGCGGTACCCCGAACCTGCTCAG
CACTGGTAGCCGATAATATCCAGGAACATACCGAAAGCGTTGTCGGAGAT
CGAGAATACACGTACTTTTGGACTGGTACAACGTATCCCGCCCTGTGGAA
CATGCGCAGTACCAGGTAAAAGGCTACCGTGCCGAATGATGAGTTCGTTC
TGCCGGGGTGCCCCCCTCGATCTCCGAATACAGTGTTGTGTAGAGATCGT
CAAGCCATACGCCTCTTGCCCGTAAGTACCTTATTGCGGCTGTGGAGGGT
GCGCTGTATACGAAAGGCGAGCAGCACCGCCCGAGGCACAACAGATCCGC
CATGTATGCACAGCAGTATTCATTATTCACCCTACTCGTACCAGGCGAGG
CCCCGGTAGGTACATACGTCCACGATATACCTTCGTGTGTACTCGCACGT
AATGGAAAGGAAAATACCCGATATTCGGTCTCCTGTGCGATCACCTTACT
GCTGAGTTCCGTCCCTTCGCAATGATACGCGCATGTGGCCTTTGCACCGT
ATTACGCGCGTCCTCTTCGTTTTAGAGGGGCCCCATTCGTGCTCGTGCTT
TGTGCTTCTCTTATTGCGAGATAACTGCCCCTCGCTCATTGAGCGTTGTA
TGTAAGTCGAGATTGCAGTATTTTTTCGCGGAAACGGGCGGTCCGGTCTC
CTAGTTCAAAACGGTGGGTAATAGATGCGACCACGTTTGTGTGTCTCGCG
CCCTAGTCTTCTACTGCTTCTAACTGGCAACTCTCTAGCAAGCGCGCTTC
ACGCGCCCACCTTGAAAACCGAAGTCCGTGCCAAGTATTAAAGGGCAAGA
TGCGGGGGCCTTGTTGGAGGACATGCAACAGCTACTGGCATCAAACAATT
AATCATGACATCATTCCGGCCGGTCGTACGATCCTTTTCGATGTAGGATA
TCTGTGTGCTATGCCGGTGTCTACCGCTGTTCACGTTGATGGAAATGCTA
CTGTCCTTTGTCATCCTCCGGCCTTATTGGCCCCTCGCTTCCTCTTGTAC
GTGATACCTCCCCGTAACATATTTGGGACGACTTATCGATCGATATCTAC
GATCTATCAAGTGCTTGCTCGCAGGGCAACCGGTGTCTGTTCGGTGTGGC
TGTTCGTGCATGGTCTAGGGTTTGTGTGTTGTGTCAGATTTTGTGACTCT
CTAAGTGAGCAACTTCTTGGGGCGTGAACTCCTGCTGGTCCTTTCTACCG
GTGTTGTGCGAGTCATACTGCCCCTTTCGGTGTACTTGTACCTATTTCGT
GGAGTTATTGCGGACTTGCAAGGGCTGCAAAAACGTTGCTCGTCATGTGC
GCGTGGCGATCTGTTTTGTTCTTTTTTTGTTTTGCACGATCAAGAAATAA
AACGCGCGTTTCGGCGAAATTACAGGCACTCGATTGCTGAGTTGTGCACG
CCGCTGCGGGCGTGTCCAAATTCGTGTGCTGACCAGATGCAAAATGCATG
AAAATAGGAACTAAATTACAGGAAGCACAAAGTCCTGACCCGGGGTCATC
CCGGTAAAGTTATATCTATACGCAGAGCTTTCGTGTTGCACAAAAATCTC
TCATGTCTCCTGCATGCAGCGCCCTCCGCCGCCAGGCGGAAAACATGCAG
CGCTTGTCTAATCTCTTCTGTTGTGAAACGAACGTCTGTGAAACGAACGT
CGGCGAAATAGACGGGATGAAATATTTCGAAGAGTTAAATTGAAGATTAC
CTCCTGCCCCAAGATCCAGGTGCCTCGTTGCGGGCGCTGCGACGAACAAG
GAGGAAAACGAAACAAAATTAACGTCCATACTGTACTCGGTTGGGGGTAT
GATGTTCCCGAAGATTTGCCCCGCGTACGGCGTCGCGATGAGTAAAGGTG
CATCTAGAGAGCCAGCTCCTGCTGCTGCTGCTGCTTGAACGCCATTGTTG
ACCGGCTCTTGTCCTGAATGTTCCCGCGCCGATCAGCTCGCCGCTCAGCT
TCGTCGATTGTCGCGGCACACCTCAGCCCTGGTGTCGGTTTTCGACAGGG
ATTCCTCTCGCTCTCGTGCTAG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig174:391419..399190- >mRNA_P-littoralis_Contig174.98.1 ID=mRNA_P-littoralis_Contig174.98.1|Name=mRNA_P-littoralis_Contig174.98.1|organism=Pylaiella littoralis U1_48|type=CDS|length=336bp|location=Sequence derived from alignment at P-littoralis_Contig174:391419..399190- (Pylaiella littoralis U1_48)
TCCTCTCGGACTCGACTTGAGTCTCACCCTGGCCGCGGATTTAGGTGTAG
CACTTGTGGTTGGCGGTTTAACTGCTGTCTCCAGGATGGGAGGATCCACA
TCCGCACGTGCAAAGGATTGCCATTCCAAAACAGCGATTCCTCGAGAGGA
AGTGACTCCGATATCGGAGCTGAGAACGAGGCAAGCTCAGCGGGGGACGG
CCTAGGAAGAGGTGGTTCGGGTTGCTCGAACGGCGATTTCGGCGAAGACG
CTCGCCGCTCAGCTTCGTCGATTGTCGCGGCACACCTCAGCCCTGGTGTC
GGTTTTCGACAGGGATTCCTCTCGCTCTCGTGCTAG back to top
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