prot_P-littoralis_Contig171.56.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig171.56.1
Unique Nameprot_P-littoralis_Contig171.56.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length417
Homology
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BLAST of mRNA_P-littoralis_Contig171.56.1 vs. uniprot
Match: D7G1V8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1V8_ECTSI)

HSP 1 Score: 225 bits (574), Expect = 8.120e-69
Identity = 127/204 (62.25%), Postives = 151/204 (74.02%), Query Frame = 0 
Query:  158 MTDPDKLREYRRAWTVEKDCVRPVRFRTDAVASANTGVPLRFRTIETRKLPGTPKAVERLRAKALENGQMGVVQLRQALQCRL-ADETAAAATDGAGACWRQRLVQPSDLTEGLRGAGLKPISAFDAQKAS--CGNGDGNSGGNSDGATIADIFEGLSLGGPTMNEHRSRAVTDAFQELNEGGSGVIGAGDLRRRYDSAASCSR 358
            MTDPDKLREYRR WTVE DCVRPVRF+TDAV SANTGVP RFR  E RKLPGTPKAVERLRAKALE GQMG+V+L QALQ RL A+ T    +D A    + RL+QP+DL EGL GAGL P++AFDA+K    C  G        DGA+I D+ E L  GGP  +++R +AV  AF+EL+EGGSG+I A  L+RRYD+AA+ +R
Sbjct:    1 MTDPDKLREYRRNWTVEDDCVRPVRFKTDAVTSANTGVPARFRMSEMRKLPGTPKAVERLRAKALEGGQMGIVRLHQALQRRLQANHTEPRTSDVA----QHRLLQPNDLMEGLSGAGLTPLTAFDAKKVIEFCTKG------GDDGASITDVLEELRFGGPVDDDYRVQAVKGAFRELDEGGSGLISARGLKRRYDAAAASTR 194
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig171.56.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1V8_ECTSI8.120e-6962.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 319..413
e-value: 1.6E-5
score: 27.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig171contigP-littoralis_Contig171:169186..192599 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig171.56.1mRNA_P-littoralis_Contig171.56.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig171 169186..192599 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig171.56.1 ID=prot_P-littoralis_Contig171.56.1|Name=mRNA_P-littoralis_Contig171.56.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=417bp
MICVKKAEGADTTSKQGIGRRYHRLEHRFPVMLALQQGGSNALRGGKKKY
GPKTKCGNWVELNKEPGQTLPAGFPHAMYRTDAHQQMLDGVLQRPKRFGA
GLPPPEDAMIDYSRVINYDKQQGDSRWAGITSTEFVSPRKCGEKSKEFAS
SFKLTGGMTDPDKLREYRRAWTVEKDCVRPVRFRTDAVASANTGVPLRFR
TIETRKLPGTPKAVERLRAKALENGQMGVVQLRQALQCRLADETAAAATD
GAGACWRQRLVQPSDLTEGLRGAGLKPISAFDAQKASCGNGDGNSGGNSD
GATIADIFEGLSLGGPTMNEHRSRAVTDAFQELNEGGSGVIGAGDLRRRY
DSAASCSRCCPTKETRRALLDNFSLYEEAGRDGMTRAGFEGFMADALCGV
ESDAEFDAVLEALVGK*
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