prot_P-littoralis_Contig170.37.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig170.37.2
Unique Nameprot_P-littoralis_Contig170.37.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length635
Homology
BLAST of mRNA_P-littoralis_Contig170.37.2 vs. uniprot
Match: D8LRA9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRA9_ECTSI)

HSP 1 Score: 434 bits (1116), Expect = 4.120e-141
Identity = 313/447 (70.02%), Postives = 339/447 (75.84%), Query Frame = 0
Query:    1 MTNGSVTSSLGGLSGRGAQQESSSHHNINGRKGRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNRSGDRRNGV--DRAATTGGGVXXXXXXXXANELAARALLKSIAGGI--GAAPAGRXXXXGSTMPAWMTHPGGPGGLQESSSGSKAVGGVDLKERSSPPRFTRSSQPLPPEPTMTDGGIAGRGGGRGWERNGXXXXXXXXXXXXXXXXXXXNGRRTEPLPAVFSVHKGEVVKTETFGAFVKLDGYRKHGLVHCSQMASYRVEDVTDICKAGDTVFVKVIEVTEGAEPREQRIALSMKMVNQADGTDLDPSNAEAETDLQRRKPTGGSDRAPVKLEAVFNTTCTKCGVQGHLSIDCFSRGGKKYDLVDEEDPRDAPVITNGGXXXRXXXXXGMRGVYREPPRG----AVGRGVGATMPAWMTDLGLADKLGKKSHRK 439
            MT+GSV  SLGGL+GRG    SS            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +RS DRRNG   D AA +GG          AN++A+RA+ ++ AGG       AGRXXXXGST+PAWMTHPGGPGGLQES  G +  G     +  SPPRF RS+ PLPPEPTM +GGI G   GR      XXXXXXXXXXXXXXXXXXX     E LP VFSVHKGEVVKTETFGAF+KLDGYRKHGLVHCSQMASYRVEDVTD+CK GDTV+ KVIEVT+GA+PREQRIALSMK+VNQADG DLDPSNAEAETD QR++P GG DRAPV+LEAVFNTTCTKCGV GHLSIDCFSRGGKKY+LVDEEDPRD     NG          GMRGV+REPP G    A GRG GATMPAWM DLGL DKL KKSHRK
Sbjct:   17 MTSGSVAPSLGGLNGRGGPASSSHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRSDDRRNGGGRDTAARSGG-------RSNANDVASRAVQQAFAGGXXXNVPAAGRXXXXGSTIPAWMTHPGGPGGLQESDRGDRGDGRPSKDK--SPPRFARSAGPLPPEPTMANGGITG---GRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEKLPEVFSVHKGEVVKTETFGAFIKLDGYRKHGLVHCSQMASYRVEDVTDVCKVGDTVYAKVIEVTDGADPREQRIALSMKLVNQADGKDLDPSNAEAETDAQRKRPAGGGDRAPVQLEAVFNTTCTKCGVHGHLSIDCFSRGGKKYELVDEEDPRD-----NGRGGAGGGTGNGMRGVHREPPHGGGALAGGRGRGATMPAWMNDLGLVDKLNKKSHRK 446          
BLAST of mRNA_P-littoralis_Contig170.37.2 vs. uniprot
Match: A0A835YH79_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH79_9STRA)

HSP 1 Score: 170 bits (430), Expect = 9.070e-42
Identity = 105/272 (38.60%), Postives = 138/272 (50.74%), Query Frame = 0
Query:  224 EPLPAVFSVHKGEVVKTETFGAFVKLDGYRKHGLVHCSQMASYRVEDVTDICKAGDTVFVK------------------------------------VIEVTEGAEPREQRIALSMKMVNQADGTDLDPSNAEAETDLQRRKPTGG------------SDRAPVKLEAVFNTTCTKCGVQG-------------------HLSIDCFSRGGKKYDLVDEEDPRDAPVITNGGXXXRXXXXXGMRGVYREP----PRGAVGRGVGATMPAWMT 424
            + LPA++SVH GEV   + FG FV   G+RKHGLVH SQ+A YRVEDV D    GD V+VK                                    VI+V EGA PRE ++A+SMK+V+Q+ G DLDP+N EA+ +  RR   GG            + + P++L AVFNT C+KCG                      H+S+DCFSRGG+KY+LV E+          GG         GM+GV + P    P  ++GRG  AT+P+WMT
Sbjct:  283 DTLPALYSVHHGEVASVQDFGCFVSAPGHRKHGLVHKSQLAQYRVEDVADAVAVGDKVWVKYQXXXXXXXXXXXXXXXXXXKGGXXXXXXXXXXXXKVIDVQEGATPRESKVAMSMKLVDQSTGKDLDPTNEEAQDEAARRMGGGGXRXXXXXXXXXXAPKGPIELGAVFNTVCSKCGAXXXXXXXXXXXXXXXXXXXXXHMSVDCFSRGGQKYELVTED--------LEGGEPA-----GGMKGVAKPPDVPPPSVSMGRGKAATLPSWMT 541          
BLAST of mRNA_P-littoralis_Contig170.37.2 vs. uniprot
Match: UPI001C0580E8 (nucleolar protein of 40 kDa n=1 Tax=Melanotaenia boesemani TaxID=1250792 RepID=UPI001C0580E8)

HSP 1 Score: 150 bits (379), Expect = 6.780e-38
Identity = 77/154 (50.00%), Postives = 105/154 (68.18%), Query Frame = 0
Query:  226 LPAVFSVHKGEVVKTETFGAFVKLDGYRKHGLVHCSQMASYRVEDVTDICKAGDTVFVKVIEVTEGAEPREQRIALS--MKMVNQADGTDLDPSNAEAETDLQRRKPTGGSDRAPVKLEAVFNTTCTKCGVQGHLSIDCFSRGGKKYDLVDEED 377
            LP +FS+ KGEVV  +T+GAFV+L GY+K GLVH S+M++ RVE+ ++I   G+ V++KVI    G E + +++ LS  MK VNQ  G DLDP+N  AE D +RR+      R  + LEAV NTTC+KCG +GH + DCFS  G +Y L+ EED
Sbjct:   17 LPPLFSIAKGEVVSVQTYGAFVRLPGYKKEGLVHVSEMSASRVENASEIVDVGEKVWIKVI----GREIQGEKVKLSFSMKSVNQGTGQDLDPNNVMAEQDARRRRMFKDETRNKITLEAVLNTTCSKCGCRGHFTKDCFSTPGSQYALLPEED 166          
BLAST of mRNA_P-littoralis_Contig170.37.2 vs. uniprot
Match: A0A3P8WCJ4_CYNSE (Zinc finger CCHC-type containing 17 n=3 Tax=Cynoglossus semilaevis TaxID=244447 RepID=A0A3P8WCJ4_CYNSE)

HSP 1 Score: 149 bits (377), Expect = 1.330e-37
Identity = 77/159 (48.43%), Postives = 105/159 (66.04%), Query Frame = 0
Query:  224 EPLPAVFSVHKGEVVKTETFGAFVKLDGYRKHGLVHCSQMASYRVEDVTDICKAGDTVFVKVIEVTEGAEPREQRIALS--MKMVNQADGTDLDPSNAEAETDLQRRKPTGGSDRAPVKLEAVFNTTCTKCGVQGHLSIDCFSRGGKKYDLVDEEDPRD 380
            E LP ++S+ KGEVV  +T+GAFV+L GYRK GLVH S+M++ RVE  ++I   G+ V++KVI    G E R  ++ +S  MK VNQ  G DLDP+N  AE D +RR+         + LEAV NTTC+KCG +GH + DCFS  G +Y L+ EED ++
Sbjct:   16 EGLPPIYSILKGEVVSVQTYGAFVRLPGYRKEGLVHVSEMSASRVEKASEIVDVGEQVWIKVI----GREIRGDKVKMSFSMKAVNQGTGRDLDPNNVNAEQDARRRRQFRDQTGNKITLEAVLNTTCSKCGCKGHFTKDCFSAPGLQYALLPEEDDKE 170          
BLAST of mRNA_P-littoralis_Contig170.37.2 vs. uniprot
Match: A0A3B4X9C6_SERLL (Zinc finger CCHC-type containing 17 n=2 Tax=Carangaria TaxID=1489904 RepID=A0A3B4X9C6_SERLL)

HSP 1 Score: 148 bits (373), Expect = 1.940e-37
Identity = 77/154 (50.00%), Postives = 103/154 (66.88%), Query Frame = 0
Query:  226 LPAVFSVHKGEVVKTETFGAFVKLDGYRKHGLVHCSQMASYRVEDVTDICKAGDTVFVKVIEVTEGAEPREQRIALS--MKMVNQADGTDLDPSNAEAETDLQRRKPTGGSDRAPVKLEAVFNTTCTKCGVQGHLSIDCFSRGGKKYDLVDEED 377
            LP ++S+ KGEVV  +T+GAFV+L GY+K GLVH S+M++ RVE+ ++I   G+ V++KVI    G E R  ++ LS  MK VNQ  G DLDP+N  AE D +RRK         + LEAV NTTC+KCG +GH + DCFS  G +Y L+ EED
Sbjct:   16 LPPLYSISKGEVVSVQTYGAFVRLPGYKKEGLVHVSEMSATRVENASEIVDVGEQVWIKVI----GKEIRGDKVKLSFSMKAVNQGTGRDLDPNNVMAEQDARRRKQFRDQTGNRITLEAVLNTTCSKCGCKGHFTKDCFSAPGLQYALLPEED 165          
BLAST of mRNA_P-littoralis_Contig170.37.2 vs. uniprot
Match: A0A1A7YY55_9TELE (Zinc finger, CCHC domain containing 17 n=2 Tax=Nothobranchiidae TaxID=405002 RepID=A0A1A7YY55_9TELE)

HSP 1 Score: 147 bits (372), Expect = 1.950e-37
Identity = 76/153 (49.67%), Postives = 103/153 (67.32%), Query Frame = 0
Query:  226 LPAVFSVHKGEVVKTETFGAFVKLDGYRKHGLVHCSQMASYRVEDVTDICKAGDTVFVKVIEVTEGAEPREQRIALS--MKMVNQADGTDLDPSNAEAETDLQRRKPTGGSDRAPVKLEAVFNTTCTKCGVQGHLSIDCFSRGGKKYDLVDEE 376
            LP ++S+ KGEVV  +T+GAFV+L GYRK GLVH S+M++ RVE  ++I   G+ V++KVI    G E + +++ LS  MK VNQ  G DLDP+N +AE D +RR+         + LEAV NTTC+KCG +GH + DCFS  G +Y LV EE
Sbjct:   17 LPPMYSIAKGEVVSVQTYGAFVRLPGYRKEGLVHVSEMSATRVESASEIVDVGEQVWIKVI----GREIQGEKVKLSFSMKAVNQGTGRDLDPNNVQAEQDARRRRQFRDQGSNRITLEAVLNTTCSKCGCKGHFTKDCFSAPGLQYALVPEE 165          
BLAST of mRNA_P-littoralis_Contig170.37.2 vs. uniprot
Match: A0A1S3Q0U9_SALSA (nucleolar protein of 40 kDa n=11 Tax=Protacanthopterygii TaxID=41705 RepID=A0A1S3Q0U9_SALSA)

HSP 1 Score: 149 bits (377), Expect = 2.290e-37
Identity = 75/153 (49.02%), Postives = 103/153 (67.32%), Query Frame = 0
Query:  226 LPAVFSVHKGEVVKTETFGAFVKLDGYRKHGLVHCSQMASYRVEDVTDICKAGDTVFVKVIEVTEGAEPREQRIALS--MKMVNQADGTDLDPSNAEAETDLQRRKPTGGSDRAPVKLEAVFNTTCTKCGVQGHLSIDCFSRGGKKYDLVDEE 376
            LPA++S+ KGEV   +T+GAF+K+ GYRK GLVH S++++ RVE+V ++   G+ V++KVI    G E R+ ++ LS  MK VNQ  G DLDP+N  AE D +RR+         + LEAV NTTC KCG +GH + DCFS  G +YDL+ EE
Sbjct:   17 LPAMYSIVKGEVASVQTYGAFIKIPGYRKQGLVHISELSACRVENVAEVVDVGEQVWIKVI----GREMRDDKVKLSFSMKAVNQGTGKDLDPNNVIAEQDERRRRQFKDGTGRRITLEAVLNTTCKKCGCKGHFAKDCFSAPGLQYDLIPEE 165          
BLAST of mRNA_P-littoralis_Contig170.37.2 vs. uniprot
Match: A0A3B3ZR79_9GOBI (Zinc finger, CCHC domain containing 17 n=3 Tax=Oxudercinae TaxID=497678 RepID=A0A3B3ZR79_9GOBI)

HSP 1 Score: 149 bits (375), Expect = 2.740e-37
Identity = 79/165 (47.88%), Postives = 107/165 (64.85%), Query Frame = 0
Query:  220 GRRTEP-----LPAVFSVHKGEVVKTETFGAFVKLDGYRKHGLVHCSQMASYRVEDVTDICKAGDTVFVKVIEVTEGAEPREQRIALS--MKMVNQADGTDLDPSNAEAETDLQRRKPTGGSDRAPVKLEAVFNTTCTKCGVQGHLSIDCFSRGGKKYDLVDEED 377
            G + EP     LP +FS+ KGEVV  +T+GAFV+L GY+  GLVH S+M++ RVE+ ++I   G+ V++KVI    G E   +++ LS  MK VNQ  G DLDP+N  A+ D +RRK      R  + LEAV NTTC+KCG +GH + DCFS  G +Y L+ EED
Sbjct:    6 GSKAEPSGLDGLPPLFSISKGEVVSVQTYGAFVRLPGYKNQGLVHVSEMSASRVENPSEIVDVGEQVWIKVI----GREIHGEKVKLSFSMKAVNQGTGRDLDPNNVMADQDARRRKQFKDGTRNKITLEAVLNTTCSKCGCKGHFTKDCFSAPGLQYTLLPEED 166          
BLAST of mRNA_P-littoralis_Contig170.37.2 vs. uniprot
Match: A0A6G0HS78_LARCR (Nucleolar protein of 40 kDa n=4 Tax=Eupercaria TaxID=1489922 RepID=A0A6G0HS78_LARCR)

HSP 1 Score: 149 bits (375), Expect = 3.060e-37
Identity = 78/156 (50.00%), Postives = 104/156 (66.67%), Query Frame = 0
Query:  224 EPLPAVFSVHKGEVVKTETFGAFVKLDGYRKHGLVHCSQMASYRVEDVTDICKAGDTVFVKVIEVTEGAEPREQRIALS--MKMVNQADGTDLDPSNAEAETDLQRRKPTGGSDRAPVKLEAVFNTTCTKCGVQGHLSIDCFSRGGKKYDLVDEED 377
            E LP +FS+ KGEVV  +T+GAFV+L GY+K GLVH S+M++ RVE+ ++I   G+ V++KVI    G E R  ++ LS  MK VNQ  G DLDP+N  AE D +RR+         + LEAV NTTC+KCG +GH + DCFS  G +Y L+ EED
Sbjct:   13 EGLPPIFSIAKGEVVSVQTYGAFVRLPGYKKEGLVHVSEMSASRVENASEIVDVGEQVWIKVI----GREIRGDKVKLSFSMKAVNQGTGRDLDPNNVMAEQDSRRRRQFRDHTGNRITLEAVLNTTCSKCGCKGHFTKDCFSAPGLQYALLPEED 164          
BLAST of mRNA_P-littoralis_Contig170.37.2 vs. uniprot
Match: A0A4W6CXV4_LATCA (Zinc finger CCHC-type containing 17 n=2 Tax=Percomorphaceae TaxID=1489872 RepID=A0A4W6CXV4_LATCA)

HSP 1 Score: 149 bits (375), Expect = 3.410e-37
Identity = 81/166 (48.80%), Postives = 107/166 (64.46%), Query Frame = 0
Query:  219 NGRRTEP-----LPAVFSVHKGEVVKTETFGAFVKLDGYRKHGLVHCSQMASYRVEDVTDICKAGDTVFVKVIEVTEGAEPREQRIALS--MKMVNQADGTDLDPSNAEAETDLQRRKPTGGSDRAPVKLEAVFNTTCTKCGVQGHLSIDCFSRGGKKYDLVDEED 377
            +G  +EP     LP +FS+ KGEVV  +T+GAFV+L GYRK GLVH S+M++ RVE+ ++I   G+ V++KVI    G E    ++ LS  MK VNQ  G DLDP+N  AE D +RRK         + LEAV NTTC+KCG +GH + DCFS  G +Y L+ EED
Sbjct:    5 DGPASEPAGLDGLPPLFSISKGEVVSVQTYGAFVRLPGYRKEGLVHVSEMSASRVENASEIVDVGEQVWIKVI----GREIHGDKVKLSFSMKAVNQGTGRDLDPNNVMAEQDARRRKQFRDQTGNRITLEAVLNTTCSKCGCKGHFTKDCFSAPGLQYALLPEED 166          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig170.37.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRA9_ECTSI4.120e-14170.02Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YH79_9STRA9.070e-4238.60Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
UPI001C0580E86.780e-3850.00nucleolar protein of 40 kDa n=1 Tax=Melanotaenia b... [more]
A0A3P8WCJ4_CYNSE1.330e-3748.43Zinc finger CCHC-type containing 17 n=3 Tax=Cynogl... [more]
A0A3B4X9C6_SERLL1.940e-3750.00Zinc finger CCHC-type containing 17 n=2 Tax=Carang... [more]
A0A1A7YY55_9TELE1.950e-3749.67Zinc finger, CCHC domain containing 17 n=2 Tax=Not... [more]
A0A1S3Q0U9_SALSA2.290e-3749.02nucleolar protein of 40 kDa n=11 Tax=Protacanthopt... [more]
A0A3B3ZR79_9GOBI2.740e-3747.88Zinc finger, CCHC domain containing 17 n=3 Tax=Oxu... [more]
A0A6G0HS78_LARCR3.060e-3750.00Nucleolar protein of 40 kDa n=4 Tax=Eupercaria Tax... [more]
A0A4W6CXV4_LATCA3.410e-3748.80Zinc finger CCHC-type containing 17 n=2 Tax=Percom... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022967RNA-binding domain, S1SMARTSM00316S1_6coord: 228..304
e-value: 2.5E-11
score: 53.7
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 224..315
e-value: 5.4E-23
score: 82.7
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 231..307
IPR003029S1 domainPFAMPF00575S1coord: 232..291
e-value: 2.1E-11
score: 44.0
IPR003029S1 domainPROSITEPS50126S1coord: 230..304
score: 15.858896
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 452..477
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 592..634
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 563..582
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 320..335
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 478..514
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 435..451
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..224
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 428..634
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 373..402
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 307..337
NoneNo IPR availablePANTHERPTHR15838NUCLEOLAR PROTEIN OF 40 KDAcoord: 197..507
IPR037320Nucleolar protein of 40kDaPANTHERPTHR15838:SF1NUCLEOLAR PROTEIN OF 40 KDAcoord: 197..507
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 349..362
score: 8.828579

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig170contigP-littoralis_Contig170:82652..89945 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig170.37.2mRNA_P-littoralis_Contig170.37.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig170 82017..90478 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig170.37.2 ID=prot_P-littoralis_Contig170.37.2|Name=mRNA_P-littoralis_Contig170.37.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=635bp
MTNGSVTSSLGGLSGRGAQQESSSHHNINGRKGRSRSRSRSRRRDGDGGR
DRSRRRSGSRDRRRSRSRSRHNRSGDRRNGVDRAATTGGGVGGGGSGSNA
NELAARALLKSIAGGIGAAPAGRGRGRGSTMPAWMTHPGGPGGLQESSSG
SKAVGGVDLKERSSPPRFTRSSQPLPPEPTMTDGGIAGRGGGRGWERNGG
GRYGSGGGRGGGRGGDRGNGRRTEPLPAVFSVHKGEVVKTETFGAFVKLD
GYRKHGLVHCSQMASYRVEDVTDICKAGDTVFVKVIEVTEGAEPREQRIA
LSMKMVNQADGTDLDPSNAEAETDLQRRKPTGGSDRAPVKLEAVFNTTCT
KCGVQGHLSIDCFSRGGKKYDLVDEEDPRDAPVITNGGGGGRGDGGGGMR
GVYREPPRGAVGRGVGATMPAWMTDLGLADKLGKKSHRKEKKSKKTKSDR
HRRSHREGDGSGSSDSDSESDANDRDKKRSKKHHKSGKHHKSSKHKKHHD
KRSNHSKHASGKKRHSSRRQDDGSGSSSEEEGGIYMNGADGGGDSRGKGY
DNASSGGQRSRSRYRSSSREHRSGDGGAGRRGRSRSRNRGGSGVFRTEDR
GRFADAEKVATHMGDGGRWRPRGDSDRSNSRSTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022967S1_dom
IPR012340NA-bd_OB-fold
IPR003029S1_domain
IPR037320pNO40
IPR001878Znf_CCHC