mRNA_P-littoralis_Contig17.106.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig17.106.1
Unique NamemRNA_P-littoralis_Contig17.106.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig17.106.1 vs. uniprot
Match: D7FK46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK46_ECTSI)

HSP 1 Score: 628 bits (1619), Expect = 5.440e-219
Identity = 319/584 (54.62%), Postives = 389/584 (66.61%), Query Frame = 1
Query:   13 VCLSGAIRSFVHHAVHGSIQGNLIEAIKADGCKVDVFAYATREDTVGRDKKVSNSEFTPNASDIRTVLEELAPTRLVWHQEQAGSIPNSCPADFDSSTAPSPGGGRYGGDDGNTTQEALIKSDFLSRLFSIFRQIFRPDASNDLYWQMYKSLAVYRMALREEKRKGRDFAYDWIIRGRFDVAWVRPLPPLRSFSREAVWFGRHYWPMSDQFAMVPRAFSDRFFNAVAAFYACDGQSWPPSVAWWQPGCRC-GFEESVLFRHLHASDVPYRYYFMFQYKITRGALGGACHLAQVAFDEPCNLLTVAGAFGSPLNSQQCSEALAEWATLRCQTLLPAKGMNDARRTDAMLSSDPRAWEQLVDKLSSEQQTPAAAATARTGRETSGTKGGPFTIGETLRYTAVPTTKDIDRVRSKLIALRDAVLLPT-VHPSMEDAASVFDNFEAKNYSRSDRWDGWQMLPLWSVYSLTGCPLEEPRFPGLSPHIVSYYTMRASLLRELAQSLKCFVHGLIQQKSDEVGDDFDRSSCEGTRSLEMIMIDVALHTEELGICTADDGLGLRAMDHILSFFREPAVHCKGYGNLGDDHTA 1758
            +C SGAIRSFVH AVH SI+ NLIE+IKADGC+VDVFAY TREDTV + K+V N EFTPN+SD+   L  L PTRL+WHQ+QAG IPN C                      N   +A   S   +R    + Q + P+AS  LYWQ+YKSLA YRMALREEKR G  F YDW+IRGR DVAW RPLPPLRSFSR+AVWFGRHYWPMSD FA+VPR FSDRFF+AV  FYACDG+SWPP  +WWQP C   GFEESVLFRHLHAS++PYR+Y +F + ITRG +GG C L  + + E C+LL +  A   P +   C EALAE++ LRC+TL PA+GM D RR DA+L  +PRAWE L+D     +  PA AA    GR T G         +   YT+V   +D+D  R KL+ LRDA+  P+ + P  E A       EAK  S  DRW GW+  PLW ++S+ GCPL EP+ PG SPH+V YYTM   L+REL QS+KCFV  +I + +   G D ++SSC G RSL+++MIDV+LHTEELGICTAD  LGL A + +  FF  PA HC GYG L  +  +
Sbjct:    1 MCFSGAIRSFVHPAVHRSIRTNLIESIKADGCEVDVFAYVTREDTVVKAKQVENPEFTPNSSDVEVALAVLEPTRLLWHQDQAGIIPNGCAGV-------------------NNRTDASRHS---ARHLWYWEQRYSPEASRSLYWQLYKSLAAYRMALREEKRIGSGFTYDWVIRGRLDVAWARPLPPLRSFSRQAVWFGRHYWPMSDHFALVPRKFSDRFFSAVKTFYACDGRSWPPPSSWWQPECATIGFEESVLFRHLHASEIPYRFYPLFDFIITRGVIGGVCKLGFIVYSEVCSLLGLWNALQPPFSRDHCLEALAEYSDLRCRTLFPARGMEDERRVDAILDPEPRAWEALLDSSPLLEPIPAVAAPGPLGRATEGDSS------DASIYTSVAKAEDVDSARLKLVLLRDALQAPSPLEPHYEMALRE----EAKERSLLDRWGGWKTHPLWWIHSIMGCPLAEPQHPGPSPHVVLYYTMGEPLVRELVQSVKCFVSRIIGE-TQVGGGDTNQSSCNGVRSLDLVMIDVSLHTEELGICTADGSLGLSASEQVSRFFDNPAAHCAGYGRLDSERLS 551          
BLAST of mRNA_P-littoralis_Contig17.106.1 vs. uniprot
Match: D7G5E2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5E2_ECTSI)

HSP 1 Score: 301 bits (771), Expect = 2.700e-86
Identity = 228/670 (34.03%), Postives = 311/670 (46.42%), Query Frame = 1
Query:    1 CRVAVCLSGAIRSFVHHAVHGSIQGNLIEAIKADGCKVDVFAYATREDTVGRDKKVSNSEFTPNASDIRTVLEELAPTRLVWHQEQAGSIPNSC----------------PADFDSSTAPS--PGGGRYGGDDGNTTQEALIKSDFLSRLFSIFRQIFRPDASNDLYWQMYKSLAVYRMALREEKRKGRDFA-----------YDWIIRGRFDVAWVRPLPPLRSFSREAVWFGRHYWPMSDQFAMVPRAFSDRFFNAVAAFYACD---GQSWPPSVAWWQPGCRC------------------------------------------------------GFEESVLFRHLHASDVPYRYYFMFQYKIT-------------RGALGGACHLAQVAFDEPCNLLTVAGAFGSPLNSQQCSEALAEWATLRCQTLLPAKGMNDARRTDAMLSSDPRAWEQLVDKLSSEQQTPAAAATARTGRETSGTKGGPFTIGETLRYTAVPTTKDIDRVRSKLIALRDAVLLPT-------VH----------PSMEDAASVFDNFEAKNYSRSDRWDGW----QMLPLWSVYSLTGCPLEEPRFPGLSPHIVSYYTMRASLLRELAQSLKCFVHGLIQQKS--DEVGDDF--DRSSCEGTRSLEMIMIDVALHTEEL 1638
            C VAV +SG +RSFV   +H S + +++EAIKA+GC VDVF YA+  D    D  V     T    +I   +E L+PT+LVWHQEQAG IPNSC                P+ F  S+ P+  P GG  GGD+  + Q     S   S+  S  R+ F    S   YWQ+Y+SLA YR+A++ E  K ++ A           YDWI+  RFDVAW + LP  R+FSR+ VWF    WPMS  FA+VPRAFSDRFF+AV AF+ACD   G SWPP  AWWQP C                                                        GF ES+++RHLHAS VPYR Y MF+Y                 G     C  +   +   C LL   G F     S++C+ AL+EW++L C+T    +      +T+       R  E L   L+    T   ++      ET    G      E  R       +D+ R    L ALRDAV++         +H          PS E +       +  ++  + +  G     Q    WSV+S  GC L E  +PG +PHI+ + +  +  +RELA + KC  H  I+  +    V +DF  D + C  +RSLE++MIDV+LH+ E+
Sbjct:   39 CAVAVSISGDVRSFVDPVLHRSFRRHVVEAIKAEGCTVDVFVYASLGD---EDLLVEQDAET--IRNIEATMEFLSPTQLVWHQEQAGIIPNSCRPTATTPTTGGGDEAQPSSFAESSVPNARPTGGNVGGDN-RSNQPRGHASKEPSKPPS--REQFST-RSERFYWQLYESLAAYRLAVQREDEKEKEAATIPTSSPASSKYDWIVTTRFDVAWKKSLPSFRAFSRDVVWFAAKSWPMSTNFALVPRAFSDRFFSAVEAFHACDDGNGPSWPPGEAWWQPDCGEHGQENGNSSGNVHSGGNLHHSPRSGPAGGGGGFELRGSDDGSIFHDNRGGGRGEGFGESIVYRHLHASGVPYRPYPMFEYYTVPPYVRDGDADGDAAGDTRSGCETSTPDYFTGCVLLGTVGLFSQAYTSEECATALSEWSSLHCRTSTHLEATGPGHQTE-------RGSENLDPDLT----TWPRSSVGVYPDETETDNGDVLGAAEADRV----QEEDLRRAWFNLAALRDAVIVAADDGSEEVMHGSSNAGEEDTPSGETSRRNLGKEDGGDHDAAPKPSGSSPTRQTNRSWSVHSQGGCRLNE--YPGRAPHIIRHSSTDSHRMRELALATKCLAHRFIEGATAWSSVNEDFGFDATVCASSRSLELVMIDVSLHSAEV 682          
BLAST of mRNA_P-littoralis_Contig17.106.1 vs. uniprot
Match: A0A6H5KVJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVJ6_9PHAE)

HSP 1 Score: 286 bits (732), Expect = 1.580e-84
Identity = 217/634 (34.23%), Postives = 297/634 (46.85%), Query Frame = 1
Query:    1 CRVAVCLSGAIRSFVHHAVHGSIQGNLIEAIKADGCKVDVFAYATREDTVGRDKKVSNSEFTPNASDIRTVLEELAPTRLVWHQEQAGSIPNSC----------------PADFDSSTAPS--PGGGRYGGDDGNTTQEALIKSDFLSRLFSIFRQIFRPDASNDLYWQMYKSLAVYRMALREEKRKGRDFA-----------YDWIIRGRFDVAWVRPLPPLRSFSREAVWFGRHYWPMSDQFAMVPRAFSDRFFNAVAAFYACD---GQSWPPSVAWWQPGCRC------------------------------------------------------GFEESVLFRHLHASDVPYRYYFMFQYK-----ITRGAL-GGA-------CHLAQVAFDEPCNLLTVAGAFGSPLNSQQCSEALAEWATLRCQTLLPAKGMNDARRTD-AMLSSDP--RAWEQLVDKLSSEQQTPAAAATARTGRETSGTKGGPFTIGETLRYTAVPTTKDIDRVRSKLIALRDAVLLPTVHPSME----DAASVFDNFEAKNYSRSD--RWDGW---------------QMLPLWSVYSLTGCPLEEPRFPGLSPHIVSYYTMRASLLRELAQSLKCFVHGLIQ 1533
            C VAV +SG +RSFV   VH S Q +++EAIKA+GC VDVF YA+  D     + +   +      +I   +E L+PT+LVWHQEQAG IPNSC                P+ F SS A +  P GG  GGD+ +      +  +         R+ F    S   YWQ+Y+SLA YR+A++ E  K ++ A           YDWI+  RFDVAW   +P LR+FSR+ VWF    WPMS  FA+VPRAFSDRFF+AV AF+ACD   G SWPP  AWWQP C                                                        GF ES+++RHLHAS VPYR Y MF+Y      +  G + GGA       C  +   +   C LL   G F     S+ C+ AL+EW++L C+     +  +  R+T+ A  + +P  +AW +    +SS +        A+T R      G  F   E  R       +D+ R  S L+ALRDAV+L     S E     + +  D+   +  SR    + DG                Q    WSV+S  GC L E  +PG +PHI+ + +  +  +RELA + KC  H  ++
Sbjct:   38 CAVAVSISGDVRSFVDPVVHLSFQRHVVEAIKAEGCTVDVFVYASLGD-----EDLLEEQDAETIRNIEATMEFLSPTQLVWHQEQAGIIPNSCRPTATTPTTGGGDEARPSSFASSNAANAKPKGGNVGGDNRSNQPRGHVSKEPSK---PPGREQFST-RSERFYWQLYESLAAYRLAVQREDEKEKEAATIPTSSPASSKYDWIVTTRFDVAWKNSVPSLRAFSRDVVWFAAKSWPMSTNFALVPRAFSDRFFSAVEAFHACDDGNGPSWPPGEAWWQPDCGEDGQENENGSGSVHSGGNLHHSPRGGPAGGGGDFDLRDWDDGSIFHDNRGGSRGEGFGESIVYRHLHASGVPYRPYPMFEYYAVPPYVRDGDVDGGAARDTRSGCEASTSDYLTGCVLLGTVGLFSPAYTSEACATALSEWSSLHCRASTQPEATSTGRQTERASKNLNPYLKAWPRSSVGVSSGE--------AKTHR------GDVFGTAEEDRV----QEEDLKRAWSNLVALRDAVILAADDDSEEATHGSSNAGEDDTPIREASRRHLGKDDGGDHDAAPKPSNSSPTRQTNRSWSVHSQWGCRLNE--YPGRAPHIIRHSSTDSHRMRELALATKCLAHRFME 642          
BLAST of mRNA_P-littoralis_Contig17.106.1 vs. uniprot
Match: A0A7S2WLT0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WLT0_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 7.080e-17
Identity = 105/348 (30.17%), Postives = 149/348 (42.82%), Query Frame = 1
Query:    1 CRVAVCLSGAIRSFVHHAVHGSIQGNLIEAIKADGCKVDVFAYATREDTVGRDKKVSNSEFTPNASDIRTVLEEL--------APTRLVWHQEQAGSIPNSCPADFDSSTAPS-PGGGRYGGDDGNTTQEALIKSDFLSRLFSIFRQIFRPDASNDLYWQMYKSLAVYRMALREEKRKGRDFAYDWIIRGRFDVAWVRPLPPLRSFSREAVWFGRHYWPMSDQFAMVPRAFSDRFFNAV-----AAFYACDGQSWPPSVAWWQPGCRCGFEESVLFRHLHASDVPYRYYFMFQYKITRGALGGACH-LAQVAFDEPCNLLTVAGAFGSPLNS-QQCSEALAEWATLRC 996
            CRVAVC+SG  R+F H  V  +   NL+ A++   C+VD+F      D V   +    S  T   S    +LE L        +  RLV   E          A +   T  S P     GG  G+    +   ++  S L + +  +    +  DL              LREE+ + +D  Y W+IR RFD++++ PLPPL S SR+AV       P+SD FA+VPRA+ D +F A       A +    + +P            G  E VL   L A++ P + +  +   I R      C  L Q  F  PC L+T  GA     NS + CS +LA    L C
Sbjct:  476 CRVAVCMSGQWRTFAHPLVRQTFHQNLLGALETS-CEVDLFLCIKPSDQVAGRRNEHFSRTTAAPSTREAILEVLRAELPDVLSRVRLVLADEPLPQSNGQTSALYPLDTGTSFPKACANGG--GDCCSRSQPSAEVQSALAAAWPSLESVSSCLDL-------------VLREERLRQQD--YHWVIRTRFDLSYLVPLPPLASLSRKAVHVPYSSLPISDTFAVVPRAYVDAYFMASDLCWRGACHRWRARDFPKGA---------GSTELVLLAALRAAEAPVQLH-DWPLSIVRAPPDSPCQGLPQ--FQIPCALMTAVGAVH--WNSVEACSASLATPLLLLC 791          
BLAST of mRNA_P-littoralis_Contig17.106.1 vs. uniprot
Match: A0A7S2WMN0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WMN0_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 4.700e-11
Identity = 63/179 (35.20%), Postives = 88/179 (49.16%), Query Frame = 1
Query:  481 MALREEKRKGRDFAYDWIIRGRFDVAWVRPLPPLRSFSREAVWFGRHYWPMSDQFAMVPRAFSDRFFNAV-----AAFYACDGQSWPPSVAWWQPGCRCGFEESVLFRHLHASDVPYRYYFMFQYKITRGALGGACH-LAQVAFDEPCNLLTVAGAFGSPLNS-QQCSEALAEWATLRC 996
            + LREE+ + +D  Y W+IR RFD++++ PLPPL S SR+AV       P+SD FA+VPRA+ D +F A       A +    + +P            G  E VL   L A++ P + +  +   I R      C  L Q  F  PC L+T  GA     NS + CS +LA    L C
Sbjct:    9 LVLREERLRQQD--YHWVIRTRFDLSYLVPLPPLASLSRKAVHVPYSSLPISDTFAVVPRAYVDAYFMASDLCWRGACHRWRARDFPKGA---------GSTELVLLAALRAAEAPVQLH-DWPLSIVRAPPDSPCQGLPQ--FQIPCALMTAVGAVH--WNSVEACSASLATPLLLLC 171          
BLAST of mRNA_P-littoralis_Contig17.106.1 vs. uniprot
Match: A0A8J2SW29_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SW29_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 6.830e-6
Identity = 61/221 (27.60%), Postives = 93/221 (42.08%), Query Frame = 1
Query:    4 RVAVCLSGAIRSFVHHAVHGSIQGNLIEAIKADGCKVDVFAYATR-----EDTVGRDKKVSNSEFTPNA------SDIRTVLEELAPTRLVWHQEQAGSIPNSCPADFDSSTAPSPGGGRYGGDDGNTTQEALIKSDFL---------SRLFSIFRQIFRPDASNDLYWQMYKSLAVYRMALREEKRKGRDFAYDWIIRGRFDVAWVRPLPPLRSFSREAV 606
            R AV + G  RS     V+   + NLI  +   G  VDVF    R     E + G  +K+S +   P+       S +R +L+ L P ++ W                             G D+G+T  +A +++  L          R  ++ R   RP  S   +W  Y++   YR ALR      R+F Y +    R D AW+RP+PP++SFSR+ V
Sbjct:   61 RAAVLIVGETRSLFLPRVYELCRRNLIGGLAKQGAAVDVFLRLDRSVKASEGSEGH-RKISGARGVPSIIGHLPDSILRPMLQTLKPVQVSWFVA--------------------------GKDEGDTESDAGLRNGTLLPWRSLSIEERSLALLRAFDRPLWSQ--WWNRYQA---YRGALRYSAL--RNFEYAYFCFARSDSAWLRPVPPIQSFSRDKV 247          
BLAST of mRNA_P-littoralis_Contig17.106.1 vs. uniprot
Match: A0A0D2W0T8_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2W0T8_CAPO3)

HSP 1 Score: 59.3 bits (142), Expect = 1.000e-5
Identity = 57/201 (28.36%), Postives = 79/201 (39.30%), Query Frame = 1
Query:  397 FSIFRQIFRPD-------ASNDLYWQMYKSLAVYRMALREEKRKGRDFAYDWIIRGRFDVAWVRPLPPLRSFSREAVWFGRHYWPMSDQFAMVPRAFSDRFFNAVAAFYACDGQSWPPSVAWWQPGCRCGFEESVLFRHLHASDVPYRYYFMFQYKITRGALGGACHLAQVAFD--EPCNLLTVAGAFGSPLNSQQCSEAL 972
            F ++R    PD       AS     Q    L  Y +AL  E + G  F  DWI+R R DV +  PLP L S +      G     +S+QFA+VPR FSD F               PP     +  C    +   L   L A+++PY  +    + I R   G  C  +   F     C L  V  A    + + + S+ L
Sbjct:  172 FVVWRSFQVPDPMWTHNCASRPSLIQSLSILDSYSLALDYENQVGVKF--DWIVRARPDVGFPEPLPSLASLNESVFVPGNSEHQLSNQFAIVPRKFSDVFLRL------------PPV----EIECAANNDNDRLRLWLDANNIPYYRHKAIHFTIVRAYYGAECFRSCGGFGVGSQCELRKVCEAMFGEITNDRKSKKL 354          
BLAST of mRNA_P-littoralis_Contig17.106.1 vs. uniprot
Match: UPI0001FE4FEA (hypothetical protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=UPI0001FE4FEA)

HSP 1 Score: 59.3 bits (142), Expect = 1.810e-5
Identity = 57/201 (28.36%), Postives = 79/201 (39.30%), Query Frame = 1
Query:  397 FSIFRQIFRPD-------ASNDLYWQMYKSLAVYRMALREEKRKGRDFAYDWIIRGRFDVAWVRPLPPLRSFSREAVWFGRHYWPMSDQFAMVPRAFSDRFFNAVAAFYACDGQSWPPSVAWWQPGCRCGFEESVLFRHLHASDVPYRYYFMFQYKITRGALGGACHLAQVAFD--EPCNLLTVAGAFGSPLNSQQCSEAL 972
            F ++R    PD       AS     Q    L  Y +AL  E + G  F  DWI+R R DV +  PLP L S +      G     +S+QFA+VPR FSD F               PP     +  C    +   L   L A+++PY  +    + I R   G  C  +   F     C L  V  A    + + + S+ L
Sbjct:  172 FVVWRSFQVPDPMWTHNCASRPSLIQSLSILDSYSLALDYENQVGVKF--DWIVRARPDVGFPEPLPSLASLNESVFVPGNSEHQLSNQFAIVPRKFSDVFLRL------------PPV----EIECAANNDNDRLRLWLDANNIPYYRHKAIHFTIVRAYYGAECFRSCGGFGVGSQCELRKVCEAMFGEITNDRKSKKL 354          
BLAST of mRNA_P-littoralis_Contig17.106.1 vs. uniprot
Match: A0A0D2US65_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2US65_CAPO3)

HSP 1 Score: 58.2 bits (139), Expect = 2.440e-5
Identity = 82/332 (24.70%), Postives = 126/332 (37.95%), Query Frame = 1
Query:   10 AVCLSGAIRSFVHHAVHGSIQGNLIEAIKADGCKVDVFAYATREDTVGRDKKVSNSEFTPNASDIRTVLEELAPTR----LVWHQEQAGSI--PNSCPADFDSSTAPSPGGGRYGGDDGNTTQEALIKSDFLSRLFSIFRQIFRPDASNDLYWQMYKSLAVYRMALREEKRKGRDFAYDWIIRGRFDVAWVRPLPPLRSFSREAVWFGRHYWPMSDQFAMVPRAFSDRFFNAVAAFYACDGQSWPPSVAWWQPGCRCGFEESVLFRHLHASDVPYRYYFMFQYKITRGALGGACHLAQVAFD--EPCNLLTVAGA-FGSPLNSQQCSEALAE 978
            AV  SG +RSF + A+  S++ NL+ A+   G  + +F+ +  ED        +NS+      D+   L +L P +    +VW   Q       ++C                        ++ +LI+S  LS L S                        Y + L  E + G  F  DWI+R R DV +  PLP L S +      G   + +S+QFA+VPR +SD FF              PP     +  C    +   L   L  ++ PY  +    + I R   G  C  +   F     C L  V  A FG   N ++  +  A+
Sbjct:  101 AVAFSGTMRSFKYPALLDSLRNNLLAAL---GGTILIFSNSRLEDWPRSGLGCANSQ-----EDLFDALRDLLPGKAEHFVVWRSFQVPDPMWTHNC-----------------------ASRPSLIQS--LSVLDS------------------------YSLVLDYENQVGVKF--DWIVRARPDVGFPEPLPSLASLNESVFVPGNSEYQLSNQFALVPRKYSDVFFQL------------PPR----EIECAVENDNDRLRLWLDTNNTPYYRHKAIHFTIVRAYYGAECFRSCNGFGVGSQCELRKVCEAMFGEITNDRKSKKVDAQ 357          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig17.106.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7FK46_ECTSI5.440e-21954.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G5E2_ECTSI2.700e-8634.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KVJ6_9PHAE1.580e-8434.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2WLT0_9STRA7.080e-1730.17Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2WMN0_9STRA4.700e-1135.20Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8J2SW29_9STRA6.830e-627.60Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A0D2W0T8_CAPO31.000e-528.36Uncharacterized protein n=1 Tax=Capsaspora owczarz... [more]
UPI0001FE4FEA1.810e-528.36hypothetical protein n=1 Tax=Capsaspora owczarzaki... [more]
A0A0D2US65_CAPO32.440e-524.70Uncharacterized protein n=1 Tax=Capsaspora owczarz... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig17contigP-littoralis_Contig17:505989..511275 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7G5E2
Model size1761
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons8
Evalue4.42e-87
EggNOG OGs2CY2I@1|root,2S1H1@2759|Eukaryota
Cds size1761
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig17.106.1prot_P-littoralis_Contig17.106.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig17 505989..511275 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789817.9542613-CDS-P-littoralis_Contig17:505988..5061141680789817.9542613-CDS-P-littoralis_Contig17:505988..506114Pylaiella littoralis U1_48CDSP-littoralis_Contig17 505989..506114 -
1680789817.9631379-CDS-P-littoralis_Contig17:506619..5066651680789817.9631379-CDS-P-littoralis_Contig17:506619..506665Pylaiella littoralis U1_48CDSP-littoralis_Contig17 506620..506665 -
1680789817.9762414-CDS-P-littoralis_Contig17:506994..5071611680789817.9762414-CDS-P-littoralis_Contig17:506994..507161Pylaiella littoralis U1_48CDSP-littoralis_Contig17 506995..507161 -
1680789817.990717-CDS-P-littoralis_Contig17:507814..5082861680789817.990717-CDS-P-littoralis_Contig17:507814..508286Pylaiella littoralis U1_48CDSP-littoralis_Contig17 507815..508286 -
1680789818.0035734-CDS-P-littoralis_Contig17:508946..5092701680789818.0035734-CDS-P-littoralis_Contig17:508946..509270Pylaiella littoralis U1_48CDSP-littoralis_Contig17 508947..509270 -
1680789818.0151603-CDS-P-littoralis_Contig17:509890..5101681680789818.0151603-CDS-P-littoralis_Contig17:509890..510168Pylaiella littoralis U1_48CDSP-littoralis_Contig17 509891..510168 -
1680789818.0304217-CDS-P-littoralis_Contig17:510606..5107891680789818.0304217-CDS-P-littoralis_Contig17:510606..510789Pylaiella littoralis U1_48CDSP-littoralis_Contig17 510607..510789 -
1680789818.0425932-CDS-P-littoralis_Contig17:511110..5112751680789818.0425932-CDS-P-littoralis_Contig17:511110..511275Pylaiella littoralis U1_48CDSP-littoralis_Contig17 511111..511275 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig17.106.1

>prot_P-littoralis_Contig17.106.1 ID=prot_P-littoralis_Contig17.106.1|Name=mRNA_P-littoralis_Contig17.106.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=587bp
CRVAVCLSGAIRSFVHHAVHGSIQGNLIEAIKADGCKVDVFAYATREDTV
GRDKKVSNSEFTPNASDIRTVLEELAPTRLVWHQEQAGSIPNSCPADFDS
STAPSPGGGRYGGDDGNTTQEALIKSDFLSRLFSIFRQIFRPDASNDLYW
QMYKSLAVYRMALREEKRKGRDFAYDWIIRGRFDVAWVRPLPPLRSFSRE
AVWFGRHYWPMSDQFAMVPRAFSDRFFNAVAAFYACDGQSWPPSVAWWQP
GCRCGFEESVLFRHLHASDVPYRYYFMFQYKITRGALGGACHLAQVAFDE
PCNLLTVAGAFGSPLNSQQCSEALAEWATLRCQTLLPAKGMNDARRTDAM
LSSDPRAWEQLVDKLSSEQQTPAAAATARTGRETSGTKGGPFTIGETLRY
TAVPTTKDIDRVRSKLIALRDAVLLPTVHPSMEDAASVFDNFEAKNYSRS
DRWDGWQMLPLWSVYSLTGCPLEEPRFPGLSPHIVSYYTMRASLLRELAQ
SLKCFVHGLIQQKSDEVGDDFDRSSCEGTRSLEMIMIDVALHTEELGICT
ADDGLGLRAMDHILSFFREPAVHCKGYGNLGDDHTA*
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mRNA from alignment at P-littoralis_Contig17:505989..511275-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig17.106.1 ID=mRNA_P-littoralis_Contig17.106.1|Name=mRNA_P-littoralis_Contig17.106.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5287bp|location=Sequence derived from alignment at P-littoralis_Contig17:505989..511275- (Pylaiella littoralis U1_48)
TGTCGCGTGGCGGTGTGCTTGTCTGGAGCGATCAGGTCATTCGTACATCA TGCAGTCCATGGATCTATTCAAGGCAATCTGATCGAGGCGATCAAGGCGG ACGGCTGCAAGGTAGACGTGTTCGCGTACGCCACGCGGGAAGACACTGTC GGGAGGGACAAGAAGGTGGCTTGAATGGCACCTTGCTTCGCGCGATTATT CTGCTGGCACGCTCACAGCTCGACATGACTTATGTCCGCTACTACAACAT GTCTAGAGTTCGCGAGCTGCCTTTGGAGCTCAACCGACAGTAGCCTCCGG ACTTCGATGTCATTCATTTTCCAAGCTGCAAATCATGCCTGCCATTGTTG TCGACTTGTGGATTCAAGTTTGACTGTCCATGGGGAGCAATCGCTCATGA GCGTCAATCCTGTGATGTAGTGTCGGGCGGTAGCTGCCACGGGAGGGCCA ACACATGCATATTTACGTAACTCCTGCGAACTTCAGGTATCGAATTCAGA GTTCACGCCGAATGCCTCCGACATCAGGACCGTTCTAGAGGAACTGGCAC CGACCAGGCTTGTTTGGCATCAAGAACAAGCAGGTAGCATTCCCAACTCT TGTCCAGCTGATTTTGATAGCTCAACGGCACCATCACCCGGTGGCGGTCG CTACGGCGGGGACGACGGCGTGTGGACCTCATCGACATGGCAGGCGAGTC CAAAATTGAAGGCACACGTTATTTGTACAGCAGTTTTCAAGTACAGTACC GGCCCGCTCATAAGAAACTGGAAATCAGGCTCAGCCTTGGCTTCTTGTTG TGTCACCAGCATTAAGTATGGCTATTTCTTAACCATCGTATAGGCTTTAG TGTGGCGCCGGCTGCCGAGCCCATTTTTTTACGCCAAATTTCTTAATTTT TGAAAAATTCCCGTCTCGCTTTCTTATGAAGGTGTTTCTTATGAGCGGGC CGGTACTGTATATATATATACGGCGACATTTTAAGTTATACTCGAGTACT CTTTGTCCACGATATTTTGGGTGTATCGGGTCAACTGTAATAATACAGGA TCCCCCCGGTCTCGTTTATTGCGCCAAGAGCAAAAACATAATACCACCCT GTTCAAGAATACGACTCAAGAAGCTCTCATCAAATCCGACTTCTTGTCTC GCCTATTTTCTATATTCCGGCAGATTTTCAGACCCGACGCCAGTAATGAC CTCTACTGGCAAATGTACAAGTCACTGGCGGTCTACCGCATGGCCCTCCG GGAAGAAAAGCGAAAGGGACGCGATTTTGCCTACGATTGGATCATACGCG GCCGCTTTGACGTGGCCTGGGTTCGCCCGCTGCCACCACTGCGGTCATTT TCTCGGGAGGCGGTATGGTTCGGCCGTCACTACTGGTGAGCGTGTGGAGA ACATGTTTAGTCTAGACTATGAAGGCCTTGGGTCATCGATAAAGTGGAGG ATAAGGAAGCGGGGGACCTCCTTACTCTTTCCAGCCTCTCCCTGAGATCA TTTCTCATCAAAGATGCCATGGAAGAACTGACGGCTCGTCACAGACCGTC GTTGCAACAGTTTCAGCGTCGTCGCCAGGCGCTGGATTTTTCAATCTTAC GTGAAAGGGTTTGAAAGTTATACTGAAAAAAGCCGGGCACTGGTACCACT TCGAAGCGACTTATGAATGATGTGCGTGTTGCATGTTGCTCGTGCATAAA TCTCCTTGTTGCTGTTGGAGTAGGGCTAGCATCACGCGGTGTTTGGGGTG TGGCCCTCAGCGTGTATTTCATTGCATGGCACCATGAAGTGAATAACATC GTTCCGCTAGGTTTCGATTTCCACTTTTACTGAGAACGGGGGTGTATAAT GGCTAAAAACGAGCACAGCAAAGCAGACTATGCGTACTGCTATGTCGATG TGAATGCGCCGACAGAGTGGTGGAAGTGCGCATATTTTATCTTACGCTTT CATTATCCTCCTCTCTACTTCCGTTGCAACCATCCGTGCTCCGCCTGGAC CGAAGGCCTATGTCGGACCAGTTCGCCATGGTACCTCGTGCATTCTCCGA CCGGTTTTTTAATGCTGTAGCGGCCTTCTACGCTTGCGATGGCCAGTCGT GGCCGCCCTCGGTGGCGTGGTGGCAGCCCGGTTGCCGCTGCGGTTTCGAG GAGAGCGTGCTGTTTCGCCACCTCCACGCGTCCGACGTGCCGTACCGGTA CTATTTCATGTTCCAGTACAAAATTACGCGGGGAGCCCTAGGGGGGGCGT GCCACCTAGCGCAAGTCGCATTCGATGAACCTTGCAACCTGCTAACGGTA GCGGGGGCATTTGGGTCTCCATTGAATAGGTGCGTACGTGTTCAGCACGA GTTGCTTGCCTGCCTTTGAGCGATTCATGATACTCGTGCTGGGTGTGGGT ATTATCAGGTAGTCGACAAGTTAGACCCTGGCGGTAGCAGATGAGACACG TGACAATCTAAATGCCGCGATTGTTTTCCAACCTTTCTTGCACGCGGAGG CTTCTGAAGCTAGTGTCGTTGTTGCTGTTGTTGTTGATTCTCACTTGGGT TCACCACCAAAGTCTAGCCTGTGGTCACAAATCCGACACATACCGTGCCA AGAGGAAAATAAAATAAAAATAAAGAAACGATGGTCACCCAAACAAAGTC AGAAATCCGATACAGTACCGTTGCGGTACCACCTGTGTTGGCCAAAGTAC AAAAATATAAAATACAGAAAAAACAGGCTCAAAAAACAAAGATTGGAAAC GAACGAAACCAAGACAAACCATAATAATACTGAACCAGAGCACAGAACCA GGCAACTAGACAAATCAAGGTAGTGCAGTAGTAGCTCTCGACTTTCAGCG AAGCTGTCTCCCTTTCGCTACGTCGAACGTAAACGCGTAGTTTAAACAAA CCCCACGACGAGCCTCCGGTGTGCGGCAAGAAAAACAGTCCTCGATTCCC CTTCGTCCCTCTCTCCTACTGTTTGTTCGCCCGAAATAGCCAACAATGCA GCGAGGCGCTTGCAGAATGGGCTACCCTTCGTTGCCAGACCCTGCTTCCC GCCAAGGGCATGAACGATGCCCGCAGGACTGACGCCATGTTGAGTTCAGA TCCTAGAGCTTGGGAACAGTTGGTCGACAAATTGTCATCGGAACAACAGA CGCCTGCGGCGGCGGCGACCGCCCGAACTGGGCGAGAAACCTCAGGCACG AAAGGCGGCCCTTTCACGATCGGCGAAACTCTCCGGTACACCGCCGTACC GACGACGAAAGATATTGATCGCGTCCGATCCAAGCTGATCGCCCTGAGGG ATGCCGTGCTGCTGCCCACCGTTCACCCATCAATGGAGGACGCCGCGTCG GTATTCGACAATTTTGAAGCCAAGAATTATAGCCGTTCGGACCGGTGGGA CGGGTGGCAGATGCTGCCCCTCTGGTCGGTGTACTCACTCACCGGATGCC CCCTTGAAGAGGTGAGAGTACCTTGGGGAGTGTGGCGTTGATCATTCAAC AGGCGTTTGTGCGGGCTCCTCTCGCTGTTGTACAGACAATTTGGGGTTTT TGTTCGGGCTTGAGGTTTGGATAAAGCACCTCTCATCGATATGGGGGATG AATGCTTGTTGATCTTTATGGCGAGCTCGAGCTCCTGCCCCATTTCGCGT CCCTATTGACACCGGTCAGATTTTCCTAGGCTACGAATTACTCTCCAGTG CTCCTGGTGATTTGACCGACATGCTTTCACCCTCTTGCGCGCTAGGATCG CGAGTGTTTTGTATTGCTAGAGTTTCAGTTCGCAATGACTGAACGCGGGT GGGTGCAGCGGGTGTAGTTGCATATTTCTTGGTACGGTCACCATGGGTTT TTAGGTCGTGCTTGGCATCACTCAACTCTGTAGTCTTTTCTTCACTTTCA CGGCAATTTGCTGCTGAATCGAACACCCAGTATAGTGAGTGGAGCTCGGC TGGAACACCAAAAACGTTTCGTAGAAAAACAGGGTCCACAGTATTTACTG CGAAGCATGTGTCCAGAGCTCACATGGAAAATGTGGCGAACTCGACCGTG CAAAAAACCCGTATCCCCTCCGCTCCACTACTCCCCAACGCATGCATACG AATCCTGGCAACAGCCGCGATTTCCAGGTCTTTCGCCGCATATCGTTTCA TACTACACCATGAGAGCATCCCTCCTTAGGGAGCTGGCACAGTCACTCAA GTGCTTTGTGCATGGCTTAATCCAGCAGAAATCTGACGAAGTCGGAGACG ACTTCGACCGGAGCTCGTGCGAGGGAACCAGGTGAACAGGAAGTTTGTTG GATGAAAATCTCTCCACATTCCTGGTATATCATTTGGCGATTCTCTAGTT CGAGGAGACTGAAATTCCAGCAGTGACACGCAACGTGAGTACTCAACGCG AAACGCGGAGTGCTGCTGATTCACGTACTCGCTGTGTTGGGATGATGTGT GCTTACGCATTCCTCGAGAGGCATGATGACCACACCACCGTGCACTTTCG GATCTCTTCCGTCTGACGGCCGTCCGGGGAAACGCAACGCGCCCCCCCCC ATACTGTTGGATCTACCTGCGGTTGGTTGCTGGCCCGGATCTTCGCGACT GATGTGCAAGATCTCTCGAGATGATAATGATTGACGTCGCTCTCCACACG GAAGAGGTGGGTGCGATTTTGTGAGTTAAAGTGCGAAACTCACTAATGAT GACTCGGAACATTCAAGTATTTAGGCTGTAGTTAGCATGCCGCTCGTGTT CGGAAGGGGGTGGGCGAGAGTTTTCACTCTCGAGTACATTTCTACCTATT TCTGGCCGTGGGTTGCGCTGTCGTTCAGACGCTCTCCCAACAACAGTTGT GTGCCGGCGGGTTTGCTTCTGGGTCTTTTTGACATATATCTGGGCAGAGA ACTGCCTTTGGGTGTCTTGTAGCCGCATCATCTCCCCAGACCACGAGTGG TACGTGAGGTGCTTGCGATGACCCTAGTGTTGAGAACCGACAGCAATCCC GAGCACGCGCGCAAAACCGCCCAATCCTGAAATGCGTCCTGCATTATCGA TGGCAAATCTTGCACAACATGTGCAGTGGCACCGCAACACCTTGTTCGTG ATCTCCACCCGCAACAACCGAAATTTTGCCCTGTAACCATTCCTTCCTGT GGGTAAATCAGCTTGGCATCTGCACTGCAGACGATGGGCTGGGATTGAGG GCGATGGATCACATTCTGAGCTTCTTTCGTGAGCCGGCCGTGCATTGCAA GGGATACGGCAACTTGGGCGACGATCACACCGCTTAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig17:505989..511275-

>mRNA_P-littoralis_Contig17.106.1 ID=mRNA_P-littoralis_Contig17.106.1|Name=mRNA_P-littoralis_Contig17.106.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1761bp|location=Sequence derived from alignment at P-littoralis_Contig17:505989..511275- (Pylaiella littoralis U1_48)
TGTCGCGTGGCGGTGTGCTTGTCTGGAGCGATCAGGTCATTCGTACATCA
TGCAGTCCATGGATCTATTCAAGGCAATCTGATCGAGGCGATCAAGGCGG
ACGGCTGCAAGGTAGACGTGTTCGCGTACGCCACGCGGGAAGACACTGTC
GGGAGGGACAAGAAGGTATCGAATTCAGAGTTCACGCCGAATGCCTCCGA
CATCAGGACCGTTCTAGAGGAACTGGCACCGACCAGGCTTGTTTGGCATC
AAGAACAAGCAGGTAGCATTCCCAACTCTTGTCCAGCTGATTTTGATAGC
TCAACGGCACCATCACCCGGTGGCGGTCGCTACGGCGGGGACGACGGCAA
TACGACTCAAGAAGCTCTCATCAAATCCGACTTCTTGTCTCGCCTATTTT
CTATATTCCGGCAGATTTTCAGACCCGACGCCAGTAATGACCTCTACTGG
CAAATGTACAAGTCACTGGCGGTCTACCGCATGGCCCTCCGGGAAGAAAA
GCGAAAGGGACGCGATTTTGCCTACGATTGGATCATACGCGGCCGCTTTG
ACGTGGCCTGGGTTCGCCCGCTGCCACCACTGCGGTCATTTTCTCGGGAG
GCGGTATGGTTCGGCCGTCACTACTGGCCTATGTCGGACCAGTTCGCCAT
GGTACCTCGTGCATTCTCCGACCGGTTTTTTAATGCTGTAGCGGCCTTCT
ACGCTTGCGATGGCCAGTCGTGGCCGCCCTCGGTGGCGTGGTGGCAGCCC
GGTTGCCGCTGCGGTTTCGAGGAGAGCGTGCTGTTTCGCCACCTCCACGC
GTCCGACGTGCCGTACCGGTACTATTTCATGTTCCAGTACAAAATTACGC
GGGGAGCCCTAGGGGGGGCGTGCCACCTAGCGCAAGTCGCATTCGATGAA
CCTTGCAACCTGCTAACGGTAGCGGGGGCATTTGGGTCTCCATTGAATAG
CCAACAATGCAGCGAGGCGCTTGCAGAATGGGCTACCCTTCGTTGCCAGA
CCCTGCTTCCCGCCAAGGGCATGAACGATGCCCGCAGGACTGACGCCATG
TTGAGTTCAGATCCTAGAGCTTGGGAACAGTTGGTCGACAAATTGTCATC
GGAACAACAGACGCCTGCGGCGGCGGCGACCGCCCGAACTGGGCGAGAAA
CCTCAGGCACGAAAGGCGGCCCTTTCACGATCGGCGAAACTCTCCGGTAC
ACCGCCGTACCGACGACGAAAGATATTGATCGCGTCCGATCCAAGCTGAT
CGCCCTGAGGGATGCCGTGCTGCTGCCCACCGTTCACCCATCAATGGAGG
ACGCCGCGTCGGTATTCGACAATTTTGAAGCCAAGAATTATAGCCGTTCG
GACCGGTGGGACGGGTGGCAGATGCTGCCCCTCTGGTCGGTGTACTCACT
CACCGGATGCCCCCTTGAAGAGCCGCGATTTCCAGGTCTTTCGCCGCATA
TCGTTTCATACTACACCATGAGAGCATCCCTCCTTAGGGAGCTGGCACAG
TCACTCAAGTGCTTTGTGCATGGCTTAATCCAGCAGAAATCTGACGAAGT
CGGAGACGACTTCGACCGGAGCTCGTGCGAGGGAACCAGATCTCTCGAGA
TGATAATGATTGACGTCGCTCTCCACACGGAAGAGCTTGGCATCTGCACT
GCAGACGATGGGCTGGGATTGAGGGCGATGGATCACATTCTGAGCTTCTT
TCGTGAGCCGGCCGTGCATTGCAAGGGATACGGCAACTTGGGCGACGATC
ACACCGCTTAG
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