prot_P-littoralis_Contig17.97.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig17.97.2
Unique Name	prot_P-littoralis_Contig17.97.2
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	625

Homology

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BLAST of mRNA_P-littoralis_Contig17.97.2 vs. uniprot
Match: D7FK49_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FK49_ECTSI)

HSP 1 Score: 332 bits (850), Expect = 5.110e-102
Identity = 225/434 (51.84%), Postives = 247/434 (56.91%), Query Frame = 0

Query:    1 MERLKRVAREREEKLVKRANRDPSDLPN-DGEEAGAAADEHADTWGFSWMPAIEEFVGQAAAAAEQR-----DXXXXXXXHGGDVGDYDYTDVEEPKVAASRVRATGXXXXXXXXXHNTMSAGELLPRSFGRSGRKRRRPQASSGTAVESASRGRR--APRPPSYNEILLADKSFHNPHASETMADAFGILRPASFVLDVRADNRPWGGAAEAATAAAKAKDGTVEGGNTXXXXXXXXXXXGDKDRNNWFYDTVRDRQNRLWADARVRKGVELARKGQHQSAIDVYTQALGMCPDHDDGLVARXXXXXXXXXXXXXXXXXXXXXXXXXXXDNASSYLKETRRRMERQETSESSPGVGTAASVAAKRPEQWTGPGVNGRFDLNGIPAAVGTAVPSSTMLPNGNSERDEASRAALGALLLDGAEGDALRKMRVLLE 426
            M RLKR A+EREEKL  +A+   +D PN D E+AGA+ +EHADTWGFSWMPAIE+FV QAA A +Q      +       +  D  D     +  P    SR           XXX                                          APRPPSYNE LLADKSFHNPHASETMADAFGILRPASFVLDV  D+RPWGGAA    AAA AK  T EGG             G  +  NWFYDTVRDRQNRLWAD RVRKGVELARKGQHQ+AID YTQALGMCPDHDDGLVAR                            NASSYLKETRRRMERQE  E+     T  +      E  T   VNGR  LN + AA G  +P+S M   G++ERDEAS AALGALL DGAEGDALRKMR LLE
Sbjct:   28 MIRLKRKAQEREEKLRNQASGRLADPPNGDEEDAGASVNEHADTWGFSWMPAIEDFVEQAAEAQQQNXXXXXESSPLGANYRSDT-DXXXXXLRGPPTNTSRSSFCDPTSPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRPPSYNETLLADKSFHNPHASETMADAFGILRPASFVLDVGEDDRPWGGAA--GVAAAGAKGATAEGGEADVTTGH-----GGSEDQNWFYDTVRDRQNRLWADTRVRKGVELARKGQHQAAIDTYTQALGMCPDHDDGLVARGAAFATTGRLRQAVQDLSRALSVNPQNGNASSYLKETRRRMERQEARETPGASATTGNTTTF--ESRTDSIVNGRMGLNCVSAAGGAVMPASVMPSAGSTERDEASEAALGALLHDGAEGDALRKMRALLE 451

[Close]

BLAST of mRNA_P-littoralis_Contig17.97.2 vs. uniprot
Match: A0A836CKS1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKS1_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 1.920e-11
Identity = 46/117 (39.32%), Postives = 56/117 (47.86%), Query Frame = 0

Query:  176 MADAFGILRPASFVLDVRADNRPWGGAAEAATAAAKAKDGTVEGGNTXXXXXXXXXXXGDKDRNNWFYDTVRDRQNRLWADARVRKGVELARKGQHQSAIDVYTQALGMCPDHDDGL 292
            MA AF + RP SF +DV AD              A A+D                          WF++ +R+RQ+R WAD RV KG ELAR GQH +AI  Y QALGMC  H D +
Sbjct:    1 MASAFRVCRPLSFAVDVAADG-------------AGARD--------------------------WFFEDLRERQDRTWADTRVAKGAELARSGQHAAAIKYYDQALGMCAGHVDAV 78

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig17.97.2 vs. uniprot

BLAST of mRNA_P-littoralis_Contig17.97.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FK49_ECTSI	5.110e-102	51.84	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A836CKS1_9STRA	1.920e-11	39.32	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 289..322 e-value: 0.97 score: 18.5 coord: 255..288 e-value: 0.0072 score: 25.5
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 255..288 score: 8.9389
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 289..322 score: 9.8829
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 200..346 e-value: 4.1E-15 score: 57.8
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 250..341
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 490..521
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 450..479
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 432..624
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 432..449
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 319..370
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 327..341
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 528..557
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 558..583
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..93
IPR039190	Tetratricopeptide repeat protein 14	PANTHER	PTHR23184	TETRATRICOPEPTIDE REPEAT PROTEIN 14	coord: 155..595

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig17	contig	P-littoralis_Contig17:454628..463068 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig17.97.2	mRNA_P-littoralis_Contig17.97.2	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig17 454127..463235 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig17.97.2 ID=prot_P-littoralis_Contig17.97.2|Name=mRNA_P-littoralis_Contig17.97.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=625bp
MERLKRVAREREEKLVKRANRDPSDLPNDGEEAGAAADEHADTWGFSWMP
AIEEFVGQAAAAAEQRDQDDSEDSHGGDVGDYDYTDVEEPKVAASRVRAT
GGGGGGSSSSHNTMSAGELLPRSFGRSGRKRRRPQASSGTAVESASRGRR
APRPPSYNEILLADKSFHNPHASETMADAFGILRPASFVLDVRADNRPWG
GAAEAATAAAKAKDGTVEGGNTSSASAGARASEGDKDRNNWFYDTVRDRQ
NRLWADARVRKGVELARKGQHQSAIDVYTQALGMCPDHDDGLVARGAAFA
TTGRLRQATQDLSRALSLNPDNDNASSYLKETRRRMERQETSESSPGVGT
AASVAAKRPEQWTGPGVNGRFDLNGIPAAVGTAVPSSTMLPNGNSERDEA
SRAALGALLLDGAEGDALRKMRVLLEEDERKRKRGGDGGDGEDGVAIRKK
KSRKKDKKSSSSKSKRRSSISRNRKKRDRRNGSAGSGGDELHYDSSSTSS
TSSSGSSNSDENISSAGEADTRSSSSKKKAKAKAKTKAKKKKEHRKHKHK
KRSSTRTKARPTMPSPSVLSAAATESSRNGGRRGGGRSSGGAVRASLAAV
AGEDSGGDEEAHPILHRKKHSLWG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019734	TPR_repeat
IPR011990	TPR-like_helical_dom_sf
IPR039190	TTC14