mRNA_P-littoralis_Contig17.86.2 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig17.86.2 vs. uniprot
Match: A0A6H5KUU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU7_9PHAE) HSP 1 Score: 478 bits (1229), Expect = 1.820e-158 Identity = 254/333 (76.28%), Postives = 273/333 (81.98%), Query Frame = 1
Query: 376 MRVVSTAAAVLAFDRTTVTSSSAFQVLVPSSGSMAAAAGASRRSAVSLAAVRSSSPWAVAPASRRRAAAVPLWCASQTSDVAATPESKEGSKQEEGGHGHGGGPKAKKPKPDRNSFVQWDMRRAAMKLHTRDQAPKEGKQENKGTSFADWKPSRRGYLQFLVDSKIVYEALEEACASDPRLAEFRNTGLERSAALTKDIAWMLETYPDAAEGGEGGEGKAPPPTQNAFEYASFLRETVASSLPGFMCHYYNHYFAHTAGGRMIGRKVAESCLDGRTLEFYRWGGDDVKDLLDGVRVKIDAMAKNWSPEEKEECVEETGRTFQYGGKLLSSVTS 1374
MRV+STA AVLA +R TVTSSSAFQVLVPSSGS + A A R ++ PWA +P RRRAAAVPLWC SQT+DVAAT E K K+E GG K PK D+NSFVQWDMRRAAMKLHTRDQ+PKEGKQENKGT F+DWKPSRRGYLQFLVDSK+VYEALEEAC SDPRLAEFRNTGLER+ ALTKDIAWMLETY D+ G GG+GKAP PT+NA EYASFLRE VASSLP FMCHYYNHYFAHTAGGRMIGRKVAESCLDGRTLEFY+WG DDVK LLDGVRVKIDAMAK WS EEKE CV ET RTF+YGG LLSS+TS
Sbjct: 1 MRVISTATAVLALERGTVTSSSAFQVLVPSSGSGRSMAAARRSTS------NKPFPWAASPL-RRRAAAVPLWCTSQTTDVAATAEGKGAKKEEXXXXXXXGGVK---PKTDKNSFVQWDMRRAAMKLHTRDQSPKEGKQENKGTPFSDWKPSRRGYLQFLVDSKVVYEALEEACGSDPRLAEFRNTGLERTEALTKDIAWMLETYSDSWAEGGGGDGKAPSPTENALEYASFLREKVASSLPAFMCHYYNHYFAHTAGGRMIGRKVAESCLDGRTLEFYQWGADDVKVLLDGVRVKIDAMAKGWSEEEKEACVSETARTFKYGGSLLSSITS 323
BLAST of mRNA_P-littoralis_Contig17.86.2 vs. uniprot
Match: D7FK52_ECTSI (Heme oxygenase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK52_ECTSI) HSP 1 Score: 451 bits (1160), Expect = 1.410e-146 Identity = 248/339 (73.16%), Postives = 268/339 (79.06%), Query Frame = 1
Query: 376 MRVVSTAAAVLAFDRTTVTSSSAFQVLVPSSGSMAAAAGASRRSAVSLAAVRSSSPWAVAPASRRRAAAVPLWCASQTSDVAATPESKEGSKQEEGGHGHGGGPKAKKPKPDRNSFVQWDMRRAAMKLHTRDQAPKEGKQENKGTSFADWKPSRRGYLQFLVDSKIVYEALEEACASDPRLAEFRNTGLERSAALTKDIAWMLETYPDAAEGGEGGEGKAPPPTQNAFEYASFLRETVASSLPGFMCHYYNHYFAHTAGGRMIGRKVAES------------------CLDGRTLEFYRWGGDDVKDLLDGVRVKIDAMAKNWSPEEKEECVEETGRTF 1338
MRV+STA AVLAF+R TVT+SSAFQVLVPSSGS + A A R S+ + PWA A + RRRAAAVPLWC SQT+DVAAT E K G+K+EEG G KPK D+NSFVQWDMRRAAMKLHTRDQ+PKEGKQENKGT F+DWKPSRRGYLQFLVDSK+VYEALEEAC SDPRLAEFRNTGLER+ ALTKDIAWMLE YPD+ G GG+GKAP PT+NA EYASFLRE VAS+LPGFMCHYYNHYFAHTAGGRMIGRKVAES CLDGRTLEFY+WG DDVK LLDGVRVKIDAMAK WS EEKE CV ET RTF
Sbjct: 1 MRVLSTATAVLAFERGTVTTSSAFQVLVPSSGSGRSTAAARRSSS------NKAFPWA-ASSFRRRAAAVPLWCTSQTTDVAATAEGK-GAKKEEGXXXXXXG--GVKPKTDKNSFVQWDMRRAAMKLHTRDQSPKEGKQENKGTKFSDWKPSRRGYLQFLVDSKVVYEALEEACGSDPRLAEFRNTGLERTEALTKDIAWMLEAYPDSWAEGGGGDGKAPSPTENALEYASFLREKVASTLPGFMCHYYNHYFAHTAGGRMIGRKVAESALGVFFKHVSAFPFRSDSCLDGRTLEFYQWGSDDVKVLLDGVRVKIDAMAKGWSEEEKEACVSETARTF 329
BLAST of mRNA_P-littoralis_Contig17.86.2 vs. uniprot
Match: A0A835Z600_9STRA (Heme oxygenase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z600_9STRA) HSP 1 Score: 278 bits (711), Expect = 1.060e-83 Identity = 135/223 (60.54%), Postives = 164/223 (73.54%), Query Frame = 1
Query: 703 KPDRNSFVQWDMRRAAMKLHTRDQAPKEGKQENKGTSFADWKPSRRGYLQFLVDSKIVYEALEEACASDPRLAEFRNTGLERSAALTKDIAWMLETYPDAAEGGEGGEGKAPPPTQNAFEYASFLRETVASSLPGFMCHYYNHYFAHTAGGRMIGRKVAESCLDGRTLEFYRWGGDDVKDLLDGVRVKIDAMAKNWSPEEKEECVEETGRTFQYGGKLLSSVT 1371
K D NSFVQ +MR AMKLHTRDQAP+EG+QE G FA+W P+R GYLQFLVDS+ VY +E ++ LA R+TGLER+AAL KDIAWMLETYP+ A PP + NA Y +FL++ A S+PGF+CH+YNHYFAHTAGG MIG+KVA+ CL G+ L FY+W D V+ LLD VRV IDAMA WS EEK+EC++ET RTF+YGG LL S+T
Sbjct: 3 KADPNSFVQGEMRGVAMKLHTRDQAPREGQQEETGKKFAEWAPTRAGYLQFLVDSRAVYSTFDEVVGANDALAALRDTGLERTAALEKDIAWMLETYPELA---------TPPVSDNAAAYCAFLKDIAAKSVPGFVCHFYNHYFAHTAGGIMIGKKVADLCLGGQKLAFYQWASD-VRALLDAVRVNIDAMADGWSREEKDECLDETARTFKYGGSLLGSIT 215
BLAST of mRNA_P-littoralis_Contig17.86.2 vs. uniprot
Match: A0A6V1QVP2_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QVP2_HETAK) HSP 1 Score: 229 bits (583), Expect = 6.090e-65 Identity = 121/222 (54.50%), Postives = 154/222 (69.37%), Query Frame = 1
Query: 718 SFVQWDMRRAAMKLHTRDQAPKEGKQENKGTSFADWKPSRRGYLQFLVDSKIVYEALEEACASDPRLAEFRNTGLERSAALTKDIAWMLETY----PDAAEGGEGGEGKAPPPTQNAFEYASFLRETVASSLPGFMCHYYNHYFAHTAGGRMIGRKVAESCLDGRTLEFYRWGGDDVKDLLDGVRVKIDAMAKNWSPEEKEECVEETGRTFQYGGKLLSSVT 1371
SFVQ DMR AMKLHT+DQA +EG+Q+ + + W P YLQFLVDS++VY+ +E+ C S P L +F+NTGLER+AAL +DIAWM E + P A+ G+G YA LRE V SLPGF+CHYYNHYFAHTAGG MIGRK++E+ L+G TLEFY+W GD VK++ V IDA+A WS +K+EC+EETG TF+YGG LLS ++
Sbjct: 47 SFVQNDMRAYAMKLHTKDQA-REGEQKAQ-KPVSKWSPEPINYLQFLVDSRLVYQTMEDICNSTPGLEKFQNTGLERTAALDQDIAWMSEKFSVDVPAASPLGQG--------------YADVLREVVGRSLPGFVCHYYNHYFAHTAGGLMIGRKISEALLEGATLEFYKWAGD-VKEMGMAVIRDIDALADTWSDAQKQECLEETGNTFRYGGALLSHLS 251
BLAST of mRNA_P-littoralis_Contig17.86.2 vs. uniprot
Match: A0A7R9TEH2_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TEH2_9VIRI) HSP 1 Score: 215 bits (547), Expect = 2.820e-60 Identity = 118/234 (50.43%), Postives = 151/234 (64.53%), Query Frame = 1
Query: 667 HGHGGGPKAKKPKPDRNSFVQWDMRRAAMKLHTRDQAPKEGKQENKGTSFADWKPSRRGYLQFLVDSKIVYEALEEACASDPR---LAEFRNTGLERSAALTKDIAWMLETYPDAAEGGEGGEGKAPPPTQNAFEYASFLRETVASSLPGFMCHYYNHYFAHTAGGRMIGRKVAESCLDGRTLEFYRWGGDDVKDLLDGVRVKIDAMAKNWSPEEKEECVEETGRTFQYGGKLL 1359
HG G PK + + F+ +MR AMKLHT++QAPKEG+ E + W+P+R Y Q+LVDSK+VY+ALEE AS P LA F++TGLER AL KD+ + Y KAP PT+ YA+FLRE AS +PGFMCHYYN YFAHTAGGR IG+ +++ LDG+ LEFY W G +KD +DGVR I++MA+ WS EEK C+EET +F+Y G LL
Sbjct: 11 HGRMGAPKKE------DGFLG-EMRAYAMKLHTKEQAPKEGQAEEPSKPMSKWEPTRELYAQYLVDSKVVYDALEEVVASAPADSPLAVFQSTGLERGPALAKDLEFFESEYGI----------KAPEPTEAGSGYAAFLREKAASDVPGFMCHYYNVYFAHTAGGRQIGKMLSDMVLDGKKLEFYSWEGV-LKDHMDGVRGSINSMAEGWSEEEKTACLEETAPSFKYAGTLL 226
BLAST of mRNA_P-littoralis_Contig17.86.2 vs. uniprot
Match: UPI00064D764F (heme oxygenase 1, chloroplastic-like n=1 Tax=Erythranthe guttata TaxID=4155 RepID=UPI00064D764F) HSP 1 Score: 213 bits (542), Expect = 5.510e-59 Identity = 117/234 (50.00%), Postives = 151/234 (64.53%), Query Frame = 1
Query: 691 AKKPKP----DRNSFVQWDMRRAAMKLHTRDQAPKEGKQENKGTSFADWKPSRRGYLQFLVDSKIVYEALEEAC--ASDPRLAEFRNTGLERSAALTKDIAWMLETYPDAAEGGEGGEGKAPPPTQNAFEYASFLRETVASSLPGFMCHYYNHYFAHTAGGRMIGRKVAESCLDGRTLEFYRWGGDDVKDLLDGVRVKIDAMAKNWSPEEKEECVEETGRTFQYGGKLLSSVTS 1374
A+KPK + FV+ +MR AMKLHT+DQA KEG++E KG A W PS GYLQFLVDSK+VY+ LE A+ P AEFRNTGLERS +L KD+ W + G G P P+ YA +L E F+CH+YN YFAHTAGGRMIGRKVAE LDG+ LEFY+W G+ + LL VR K+D +A++WS EEK+ C+EET ++F++ G++L + S
Sbjct: 55 AEKPKKRYPGEAKGFVE-EMRFVAMKLHTKDQA-KEGEKEPKGQPIAKWNPSFEGYLQFLVDSKLVYDTLERIVDKAAFPEYAEFRNTGLERSESLAKDLEWFKQQ----------GHG-IPEPSSPGISYAEYLEELSEKDPQSFICHFYNTYFAHTAGGRMIGRKVAEKILDGKELEFYKWDGE-LSQLLQNVRDKLDRVAQSWSREEKDHCLEETEKSFKFSGQILRLILS 274
BLAST of mRNA_P-littoralis_Contig17.86.2 vs. uniprot
Match: A0A7S1SR94_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SR94_9CHLO) HSP 1 Score: 213 bits (542), Expect = 6.420e-59 Identity = 115/243 (47.33%), Postives = 158/243 (65.02%), Query Frame = 1
Query: 667 HGHGG-GPKAKKPKPDRNSFVQWDMRRAAMKLHTRDQAPKEGKQENKGTSFADWKPSRRGYLQFLVDSKIVYEALEE--ACASDPRLAEFRNTGLERSAALTKDIAWMLETY----PDAAEGGEGGEGKAPPPTQNAFEYASFLRETVASSLPGFMCHYYNHYFAHTAGGRMIGRKVAESCLDGRTLEFYRWGGDDVKDLLDGVRVKIDAMAKNWSPEEKEECVEETGRTFQYGGKLLSSVTS 1374
HGH G G K +P++ S +MR+ AMKLHTR+QAPKEGK E+K A + P+R GYLQFLV+SK+VY+ LE A A+ P+ F+N+GLERS AL KDIAWM +TY P+ E G G EY+ LRE + P F+CHYYN YFAHTAGGRMIG KVA CLD LEFY++ GD + L+ VR +I+++A++W+ E+++ C++ T +F+Y G ++ ++ S
Sbjct: 51 HGHSGAGTKGAVAEPNKMSGFVGEMRQVAMKLHTREQAPKEGKAESKSPPRA-FAPTREGYLQFLVESKVVYDTLETTIAEAASPQFTGFQNSGLERSEALAKDIAWMRDTYDLEVPEPKEDGPG------------MEYSRLLREFATNDPPAFICHYYNTYFAHTAGGRMIGNKVASMCLDSAELEFYKYEGD-LTQKLEAVRGEINSLAESWTAEQRQRCLDSTMDSFKYSGSIMQAIMS 279
BLAST of mRNA_P-littoralis_Contig17.86.2 vs. uniprot
Match: A0A7S2V0C2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0C2_9STRA) HSP 1 Score: 214 bits (545), Expect = 8.160e-59 Identity = 112/225 (49.78%), Postives = 154/225 (68.44%), Query Frame = 1
Query: 700 PKPDRNSFVQWDMRRAAMKLHTRDQAPKEGKQENKGTSFADWKPSRRGYLQFLVDSKIVYEALEEACASDPRLAEFRNTGLERSAALTKDIAWMLETYPDAAEGGEGGEGKAPPPTQNAFEYASFLRETVASS-LPGFMCHYYNHYFAHTAGGRMIGRKVAESCLDGRTLEFYRWGGDDVKDLLDGVRVKIDAMAKNWSPEEKEECVEETGRTFQYGGKLLSSVT 1371
PKP SFV+ ++R AMKLHTRDQA KEG+Q+ + T F WKP+R+ YLQFL +SK+VYE E+ + P LA FR+TGLERS L +D+AW+ + + EG G QN Y++ LRE +A+ +PGFMCH+YNHYFAHTAGGRMIG+K+A+ LD TL+FY+W GD VK + V +D MA W+ E+K+ C+E+T +F+Y G L+S+++
Sbjct: 102 PKP---SFVKDELRSYAMKLHTRDQA-KEGEQKAQ-TPFTKWKPTRQQYLQFLAESKVVYECFEDLVNNTPELAAFRDTGLERSKPLERDLAWLTDGRYEDVEGVTIGAEDC----QNGAAYSALLRELIAAGDIPGFMCHFYNHYFAHTAGGRMIGQKMAQLLLDSHTLDFYKWDGD-VKAMGAAVLKNVDEMAATWTDEQKQACLEQTKNSFKYSGSLMSAMS 316
BLAST of mRNA_P-littoralis_Contig17.86.2 vs. uniprot
Match: I0YPD9_COCSC (Heme oxygenase-like protein n=2 Tax=Coccomyxa TaxID=41891 RepID=I0YPD9_COCSC) HSP 1 Score: 210 bits (535), Expect = 8.610e-59 Identity = 114/220 (51.82%), Postives = 151/220 (68.64%), Query Frame = 1
Query: 721 FVQWDMRRAAMKLHTRDQAPKEGKQENKGTSFADWKPSRRGYLQFLVDSKIVYEALEE--ACASDPRLAEFRNTGLERSAALTKDIAWMLETYPDA-AEGGEGGEGKAPPPTQNAFEYASFLRETVASSLPGFMCHYYNHYFAHTAGGRMIGRKVAESCLDGRTLEFYRWGGDDVKDLLDGVRVKIDAMAKNWSPEEKEECVEETGRTFQYGGKLLSSVT 1371
FV+ +MR AMKLHTRDQAPKEG+QE+ ++ W+P+R GYL+FL +SK VYE LE A AS P A F+NTGLERSA L++DIAWM + Y A + E G G+A Y+S L+E P F+CH+YN YFAHTAGGRMIG KVA LD R L+FY++ GD + LD VR +++A+A+ W+ EEK+ C+EET ++F+Y G LL ++T
Sbjct: 7 FVE-EMRFVAMKLHTRDQAPKEGQQESAEKAWKAWEPTRVGYLRFLAESKEVYETLENIVAEASFPEYARFQNTGLERSAGLSEDIAWMQQEYSLAPVQLSEDGPGRA---------YSSLLKELARDCPPKFLCHFYNVYFAHTAGGRMIGTKVASMILDSRELQFYKYEGD-FRAKLDEVRAQLNAVAEGWTREEKDSCLEETQKSFKYSGGLLRTIT 215
BLAST of mRNA_P-littoralis_Contig17.86.2 vs. uniprot
Match: A0A2V0PH09_9CHLO (Heme oxygenase chloroplastic-like n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PH09_9CHLO) HSP 1 Score: 211 bits (538), Expect = 1.210e-58 Identity = 111/214 (51.87%), Postives = 140/214 (65.42%), Query Frame = 1
Query: 733 DMRRAAMKLHTRDQAPKEGKQENKGTSFADWKPSRRGYLQFLVDSKIVYEALEEAC--ASDPRLAEFRNTGLERSAALTKDIAWMLETYPDAAEGGEGGEGKAPPPTQNAFEYASFLRETVASSLPGFMCHYYNHYFAHTAGGRMIGRKVAESCLDGRTLEFYRWGGDDVKDLLDGVRVKIDAMAKNWSPEEKEECVEETGRTFQYGGKLLSSV 1368
+MR AMKLHTRDQAPKEGKQE+K A W P+R GY++FL +SK+VY+A EE A P F+NTGLERS L KD+AW + Y A P EYA+ LR +S P F+CHYYN+YFAHTAGGRMIG KVA LDG LEFY++ GD V LLD VRVKI+ +A++W+P++KE C++ET TF+ G L+ +
Sbjct: 51 EMRAVAMKLHTRDQAPKEGKQESKQPMTA-WTPTREGYVRFLAESKVVYDAFEEITTKAEHPEYKLFQNTGLERSKPLEKDLAWFQQQYGIATP--------QLPADSPGREYAALLRTLASSDPPAFICHYYNYYFAHTAGGRMIGSKVASMILDGAELEFYKYNGD-VGQLLDAVRVKINELAESWTPQQKEHCLKETAATFKSSGSLMGFI 254 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig17.86.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig17.86.2 >prot_P-littoralis_Contig17.86.2 ID=prot_P-littoralis_Contig17.86.2|Name=mRNA_P-littoralis_Contig17.86.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=334bp MRVVSTAAAVLAFDRTTVTSSSAFQVLVPSSGSMAAAAGASRRSAVSLAAback to top mRNA from alignment at P-littoralis_Contig17:411148..422622+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig17.86.2 ID=mRNA_P-littoralis_Contig17.86.2|Name=mRNA_P-littoralis_Contig17.86.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=11475bp|location=Sequence derived from alignment at P-littoralis_Contig17:411148..422622+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig17:411148..422622+ >mRNA_P-littoralis_Contig17.86.2 ID=mRNA_P-littoralis_Contig17.86.2|Name=mRNA_P-littoralis_Contig17.86.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1002bp|location=Sequence derived from alignment at P-littoralis_Contig17:411148..422622+ (Pylaiella littoralis U1_48)back to top |