mRNA_P-littoralis_Contig17.73.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig17.73.2 vs. uniprot
Match: A0A6H5L107_9PHAE (D27-like_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L107_9PHAE) HSP 1 Score: 392 bits (1007), Expect = 1.760e-123 Identity = 312/681 (45.81%), Postives = 352/681 (51.69%), Query Frame = 1
Query: 433 LSSWLTMPVVLLSAHTRPTQQQALSTTICADSHQALHPQF---RAAAYLSPAGAAFVGGPGVFSRRRGHDFFSNDQVEQRFHVSKVSPINRLWMPWSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHGQRRWRSVQAATMDCDGLSEVPGGDGKNRLVVREQEVQWQQQREAPNTSKTSATAVGEATVDFPNVQAPLDLPQVHHRIQSCLHSEKQHEALVLELPRTDVGDAPLHPSTPGEWMQ-----VPPLGGDGPINPLPLMNGQVPSPGLNINSQNNNKHNDNSSSRRSKG------KVDPFTVPDNDYTDSFVDSLWINLLSSRM------------------------------------------------------------------AVAVEAEEALRTGAGARAGGRGEGNAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGGGYSYEDYVALATRLQAGAPERQREVVRGVLRSVFPGWFPAFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDVEAKERGEGRVPSQEVWKNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALSAEEDPLMQEPCWTECLSSGKQPKKPQRACHTMPETPLRGP 2235
+SSWL P++L++A + PT++ ++ C ++HQA P + RA LS A G P R + D V R + W +G + R R VQA TMD DG +V K +VVRE+ ++ Q K ATA TV+FPNVQAP +LPQ PGEW+Q LGG P PL N +V GL ++D K DPF PDN+YTDSFVDSLWINLLSS A + E+A + GAGA GG G G+ A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX Y+YEDYVALAT LQAGAPERQREVVRGV FYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVD++A + GEG P QEVW+NTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDAL AEEDPLM+EPCWTECLSS KQPKKPQRACHTMPE+PLRGP
Sbjct: 1 MSSWLMTPILLIAAQSLPTRE---ASAACVEAHQAQQPAYASSRAGPSLSFPTAFVCGLPQKAVTRDKNRVVEGDHVSDR----------QRWGQRNGKRY--------------------------------RPRSRGVQA-TMDVDGPPDVASSGAKRSVVVREEVLRQQ---------KEGATAA--TTVEFPNVQAPTNLPQ------------------------------------PGEWLQQXXXXXXXLGGLPPTADAPL-NSRVSLSGL---------YDDXXXXXXXXXXXXXVKKADPFAAPDNEYTDSFVDSLWINLLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDRSXXXXXXXXXXXXXXXXXXXXXXADATVLGGEKAGQGGAGAANGGGGNGSVALSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------YTYEDYVALATGLQAGAPERQREVVRGVXXXXXXXXXXXFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDIKAAKEGEG--PRQEVWRNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALPAEEDPLMREPCWTECLSSNKQPKKPQRACHTMPESPLRGP 551
BLAST of mRNA_P-littoralis_Contig17.73.2 vs. uniprot
Match: D7FK55_ECTSI (D27-like_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK55_ECTSI) HSP 1 Score: 353 bits (907), Expect = 9.620e-114 Identity = 173/201 (86.07%), Postives = 179/201 (89.05%), Query Frame = 1
Query: 1633 MGGGYSYEDYVALATRLQAGAPERQREVVRGVLRSVFPGWFPAFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDVEAKERGEGRVPSQEVWKNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALSAEEDPLMQEPCWTECLSSGKQPKKPQRACHTMPETPLRGP 2235
MGGGY+YEDYVALAT LQAGAPERQREVVRG FYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDV+A + GEG P QEVW+NTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDAL AEEDPLM+EPCWTECLSS KQ KK QRACHTMPE+PLRGP
Sbjct: 1 MGGGYTYEDYVALATGLQAGAPERQREVVRGXXXXXXXXXXXXFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDVKAAKEGEG--PRQEVWRNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALPAEEDPLMREPCWTECLSSDKQLKKRQRACHTMPESPLRGP 199
BLAST of mRNA_P-littoralis_Contig17.73.2 vs. uniprot
Match: A0A835ZB75_9STRA (D27-like_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB75_9STRA) HSP 1 Score: 198 bits (503), Expect = 9.710e-55 Identity = 101/193 (52.33%), Postives = 124/193 (64.25%), Query Frame = 1
Query: 1651 YEDYVALATRLQAGAPER--QREVVRGVLRSVFPGWFPAFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDVEAKERGEGRVPSQEVWKNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALSAEEDPLMQEPCWTECLSSGKQPKKPQRACHTMPETP 2223
Y+ ++ LA +Q P+ QR V+ G+LR P W YR + PPSKFSAE+NA MC L WLVG S +T V V G G EVW+ VKVERCRYLEAS+CKG CMNLCK+PTE FFRE+LGMPL + P+F+DLSC F FG + EDPL+ EPC+ +C +S + RACHTMPE P
Sbjct: 24 YDTFIVLARGIQLKFPDPADQRAVIAGMLRDALPAWMLHAYRFVSPPSKFSAELNAVMCAILSDWLVGPSTVTTAEVPVA----GGGT----EVWRAAVKVERCRYLEASRCKGACMNLCKVPTETFFREELGMPLTLVPDFDDLSCTFTFGVEPAPLAEDPLVVEPCYYQCPASSAAYARSGRACHTMPELP 208
BLAST of mRNA_P-littoralis_Contig17.73.2 vs. uniprot
Match: A0A2V0P9C6_9CHLO (D27-like_C domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P9C6_9CHLO) HSP 1 Score: 163 bits (412), Expect = 1.770e-41 Identity = 85/177 (48.02%), Postives = 115/177 (64.97%), Query Frame = 1
Query: 1651 YEDYVALATRLQAG-APERQREVVRGVLRSVFPGWFPAFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDVEAKERGEGRVPSQEVWKNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALSAEEDPLMQEPCWTECLSSGKQ 2178
YED+V+++ + G + QREVVR VLR++ P P +R LFPP+++SAE NA + F WLVG+SEL E V V G G+V Q ++ V +++CRYLE+S C G C N+CK+PT+AFF E+ G+PL M PNFEDLSCE FGQ EEDP+ Q+PC+ S K+
Sbjct: 86 YEDFVSISKEIMRGRGSDAQREVVREVLRNLMPREAPGAFRRLFPPTQWSAEFNALIASMAFFWLVGESELREADVVV-----GPGQVRRQ---RSVVYIKKCRYLESSGCVGMCTNMCKVPTQAFFTEEFGLPLTMNPNFEDLSCEMIFGQAPPPVEEDPVYQQPCFIPQCSLAKR 254
BLAST of mRNA_P-littoralis_Contig17.73.2 vs. uniprot
Match: A0A0D2N974_9CHLO (D27-like_C domain-containing protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2N974_9CHLO) HSP 1 Score: 159 bits (403), Expect = 4.530e-40 Identity = 84/177 (47.46%), Postives = 113/177 (63.84%), Query Frame = 1
Query: 1651 YEDYVALATRLQAG-APERQREVVRGVLRSVFPGWFPAFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDVEAKERGEGRVPSQEVWKNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALSAEEDPLMQEPCWTECLSSGKQ 2178
Y+D+V ++ + G + +QREVVR VLRS+ P P +R LFPP+++SAE NA + F WLVG+SEL E V V E +V Q K+ V +++CRYLEAS C G C N+CK+PT+A+F E+ G+PL M PNFEDLSCE FGQ E+DP+ +PC+ S KQ
Sbjct: 17 YDDFVRISKEIMRGRSAVKQREVVREVLRSLMPREAPGAFRRLFPPTQWSAEFNALIASVAFFWLVGESELREADVQV-----AEDKVRRQ---KSLVYIKKCRYLEASGCVGMCTNMCKVPTQAYFTEEFGLPLTMKPNFEDLSCEMIFGQAPPPLEQDPVYTQPCFVPQCSLAKQ 185
BLAST of mRNA_P-littoralis_Contig17.73.2 vs. uniprot
Match: I6PEW2_9VIRI (Putative D27 family protein (Fragment) n=2 Tax=Penium margaritaceum TaxID=102169 RepID=I6PEW2_9VIRI) HSP 1 Score: 153 bits (386), Expect = 7.320e-39 Identity = 84/182 (46.15%), Postives = 110/182 (60.44%), Query Frame = 1
Query: 1651 YEDYVALATRLQAG-APERQREVVRGVLRSVFPGWFPAFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDVEAKERGEGRVPSQEVWKNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALSAEEDPLMQEPCWTECLSSGKQPKKPQ 2193
Y+ V A R+ G PE+QR+VV VL S+ P PA +R LFPP+K SAE+NA + PLF WLVG ++LTE V+V ++ G VK+ +CRYLE+S C G C+N+CKLPT+ FF D G+PL MTPNFED+SCE FGQ + +DP +Q T C KP+
Sbjct: 22 YDALVDAARRVMQGRTPEQQRQVVANVLMSMLPPNAPATFRRLFPPTKLSAEINAAITVPLFQWLVGPAKLTE--VEVNGVKQWSG-----------VKITKCRYLESSGCVGMCVNMCKLPTQDFFTNDFGLPLTMTPNFEDMSCEMVFGQMPPALADDPALQN---TXCFKDTCPMAKPE 187
BLAST of mRNA_P-littoralis_Contig17.73.2 vs. uniprot
Match: S8C784_9LAMI (D27-like_C domain-containing protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8C784_9LAMI) HSP 1 Score: 152 bits (383), Expect = 3.000e-38 Identity = 75/169 (44.38%), Postives = 108/169 (63.91%), Query Frame = 1
Query: 1645 YSYEDYVALATRLQAG-APERQREVVRGVLRSVFPGWFPAFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDVEAKERGEGRVPSQEVWKNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALSAEEDPLMQEPC 2148
Y YE +V + R+ G +P +Q+++VR VL S+ P PA +R LFPP++++AE NA + P F WLVG S++ E V+V ++ G V +++CRYLE S C G C+N+CK+PT+ FF + G+PL MTPNFED+SCE +GQ S EEDP ++PC
Sbjct: 40 YDYESFVHASRRVMVGRSPLQQQQIVREVLLSILPPGAPAQFRKLFPPTRWAAEFNAALTVPFFQWLVGPSQVVE--VEVNGVKQKSG-----------VLIKKCRYLETSGCVGMCVNMCKIPTQDFFTNEFGLPLTMTPNFEDMSCEMKYGQVPPSIEEDPTFKQPC 195
BLAST of mRNA_P-littoralis_Contig17.73.2 vs. uniprot
Match: I6PEW1_CHAGL (Putative D27 family protein n=1 Tax=Chaetosphaeridium globosum TaxID=96477 RepID=I6PEW1_CHAGL) HSP 1 Score: 154 bits (388), Expect = 3.300e-38 Identity = 79/173 (45.66%), Postives = 109/173 (63.01%), Query Frame = 1
Query: 1651 YEDYVALATRLQAG-APERQREVVRGVLRSVFPGWFPAFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDVEAKERGEGRVPSQEVWKNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALSAEEDPLMQEPCWTECLS 2166
YE +V ++ R+ G +P Q+ VR VL S+ P PA +R LFPP+K SAE+NA++ P F WLVG ++L E V+V ++ G VK+E+CRYLE S C G C+N+CK+PT+ FF + G+PL MTPNFED+SCE +GQ A EEDP ++PC+ S
Sbjct: 100 YEGFVDISKRVMQGRSPAEQQASVRRVLLSMLPPEAPASFRKLFPPTKLSAEINAWITVPFFAWLVGPAKLYE--VEVNGVKQWSG-----------VKIEKCRYLENSGCVGMCVNMCKVPTQDFFTNEFGLPLTMTPNFEDMSCEMVYGQLAPPVEEDPAYKQPCFAALCS 259
BLAST of mRNA_P-littoralis_Contig17.73.2 vs. uniprot
Match: W1PM95_AMBTC (D27-like_C domain-containing protein n=3 Tax=Amborella trichopoda TaxID=13333 RepID=W1PM95_AMBTC) HSP 1 Score: 153 bits (386), Expect = 4.560e-38 Identity = 80/186 (43.01%), Postives = 113/186 (60.75%), Query Frame = 1
Query: 1636 GGGYSYEDYVALA-TRLQAGAPERQREVVRGVLRSVFPGWFPAFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDVEAKERGEGRVPSQEVWKNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALSAEEDPLMQEPCWTECLSSGKQPKKP 2190
GG Y YE +V ++ T +Q + ++Q+EVVR VL S+ P PA +R LFPP+K++AE NA + P F WLVG S++ E V+V ++ G V + +CRYLE S C G C+N+CK+PT+ FF + G+PL MTPNFED+SC+ +GQ EEDP+ +PC+ S P P
Sbjct: 83 GGLYDYEGFVGVSKTVMQGRSRKQQQEVVREVLLSMLPPGAPAKFRKLFPPTKWAAEFNAALTVPFFHWLVGPSQVVE--VEVNGVKQKSG-----------VHITKCRYLENSGCVGMCVNMCKIPTQDFFTNEFGLPLTMTPNFEDMSCDMVYGQAPPPFEEDPVSTQPCYANISGSIANPSSP 255
BLAST of mRNA_P-littoralis_Contig17.73.2 vs. uniprot
Match: A0A8B8KJM4_ABRPR (beta-carotene isomerase D27, chloroplastic n=1 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8KJM4_ABRPR) HSP 1 Score: 152 bits (385), Expect = 6.750e-38 Identity = 77/176 (43.75%), Postives = 112/176 (63.64%), Query Frame = 1
Query: 1642 GYSYEDYVALATR-LQAGAPERQREVVRGVLRSVFPGWFPAFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDVEAKERGEGRVPSQEVWKNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALSAEEDPLMQEPCWTECLS 2166
GY YE +V ++ R +Q +Q++VVR VL S+ P PA +R LFPP+K++AE NA + P F WLVG SE+ E V+V ++ G V +++CRYLE S C G C+N+CK+PT+ FF + G+PL MTPNFED+SC+ +GQ + EEDP+ ++PC+ + S
Sbjct: 89 GYDYESFVDVSKRVMQRRTRIQQQQVVREVLLSMLPPGAPAQFRKLFPPTKWAAEFNAALTVPFFHWLVGPSEVVE--VEVNGVKQKSG-----------VHIKKCRYLENSGCVGMCVNMCKIPTQDFFTNEFGLPLTMTPNFEDMSCDMVYGQSPPAFEEDPVSKQPCYAQICS 251 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig17.73.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig17.73.2 >prot_P-littoralis_Contig17.73.2 ID=prot_P-littoralis_Contig17.73.2|Name=mRNA_P-littoralis_Contig17.73.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=604bp MSLSSWLTMPVVLLSAHTRPTQQQALSTTICADSHQALHPQFRAAAYLSPback to top mRNA from alignment at P-littoralis_Contig17:372021..382835+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig17.73.2 ID=mRNA_P-littoralis_Contig17.73.2|Name=mRNA_P-littoralis_Contig17.73.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=10815bp|location=Sequence derived from alignment at P-littoralis_Contig17:372021..382835+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig17:372021..382835+ >mRNA_P-littoralis_Contig17.73.2 ID=mRNA_P-littoralis_Contig17.73.2|Name=mRNA_P-littoralis_Contig17.73.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1812bp|location=Sequence derived from alignment at P-littoralis_Contig17:372021..382835+ (Pylaiella littoralis U1_48)back to top |