mRNA_P-littoralis_Contig17.52.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig17.52.1 vs. uniprot
Match: D7FK61_ECTSI (Efflux ABC transporter, permease/ATP-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK61_ECTSI) HSP 1 Score: 1010 bits (2612), Expect = 0.000e+0 Identity = 537/608 (88.32%), Postives = 569/608 (93.59%), Query Frame = 1
Query: 400 ASNASALALTGQARRLLELARPESHLIGGAIGLLLGTTGISLAVPKVMGGLIDSVMQGMGTYTPWEAAAILMGMFGVQSVMLTARVGLMAVAGERVAARLRNLAFGSMIVQETAFFDRNRTGDLVNRLASDVLLVQGSVTTSAAQGLRNLMMVVGCTGMLTFLSPELAVVSVAVFPPVAGVGVWFGRRLKKQQKKVQEALAGSSSVAEEVISNIRTVRQFSAEFREKDRYSEKVDVSYQMARRVGVTDAFFSGSMHFGGHASLCAVMALGGQQVASGALSVGDMTSFLLYSTFLAVNFGGLTGVYSQVMRALGASERVMAIISSAEAPTATATGDTISSGSISTAASNNLEIAGGAALGSTVAGRVIFKDVHFSYPTRPHAPVLGGMTLEVEAGSSLAIVGASGCGKSTVLRLLTRLYDPQSGTIELDGVPLRTLEPRGLRDRVGVVEQEPVLFGGTVADNIRYGRPEATQKEVESAAAVANASAFIEAFPDGYDTQVGEGGVQMSGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVTEGRTSLIVAHRLSTVRSMADKICVLNKGEVVEIGSYAELANKPDGHFRRLVQYQMLE 2223
++ SALALT QARRLLELARPES LIGG+I LLLG+T ISLAVPKVMGGLIDSVMQG G YTPWEAA ILM +FG QS+MLT R GLM VAGERVAARLRNLAFGSM+VQETAFFDRNRTGDLVNRLASDVLLVQGSVTTSAAQGLRNL+MVVGCTGML LSPELA+VSVAVFPPVAGVGVWFGRR+KKQQKKVQ+ALAGSS+VAEEV+SNIRTVRQFSAEFREK RY+EKV +SY MARRVGVTDAFF+GSMHFGGHASLCAVMALGGQQVASGALS+GDMTSFLLYSTFLAVNFGGLTGVYSQ+MRALGASERVMAII+SAEAP A A+ D S + ++ NLEIAGGAALG TVAG V+FKDVHFSYPTRPHAPVLGGMTLEVEAGSSLAIVGASGCGKSTVLRLLTRLYDPQSGTIELDGVPL LEPRGLRDRVGVVEQEPVLFGG++ADNIRYGRPEA++ EVE+AAAVANAS F+E FPDGYDTQVGEGGVQMSGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVTEGRTSLIVAHRLSTVRSMA+KICVLNKGEVVEIGSY ELA+KPDGHFRRLVQYQMLE
Sbjct: 28 SAQISALALTDQARRLLELARPESKLIGGSIVLLLGSTTISLAVPKVMGGLIDSVMQGTGAYTPWEAAGILMALFGAQSIMLTGRSGLMTVAGERVAARLRNLAFGSMVVQETAFFDRNRTGDLVNRLASDVLLVQGSVTTSAAQGLRNLLMVVGCTGMLCNLSPELAMVSVAVFPPVAGVGVWFGRRMKKQQKKVQQALAGSSAVAEEVLSNIRTVRQFSAEFREKGRYAEKVGISYDMARRVGVTDAFFAGSMHFGGHASLCAVMALGGQQVASGALSIGDMTSFLLYSTFLAVNFGGLTGVYSQIMRALGASERVMAIINSAEAPPAIASSDNQDQDSATRDSAANLEIAGGAALGDTVAGHVVFKDVHFSYPTRPHAPVLGGMTLEVEAGSSLAIVGASGCGKSTVLRLLTRLYDPQSGTIELDGVPLHMLEPRGLRDRVGVVEQEPVLFGGSIADNIRYGRPEASRPEVEAAAAVANASDFVEGFPDGYDTQVGEGGVQMSGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVTEGRTSLIVAHRLSTVRSMANKICVLNKGEVVEIGSYDELASKPDGHFRRLVQYQMLE 635
BLAST of mRNA_P-littoralis_Contig17.52.1 vs. uniprot
Match: A0A835ZGY2_9STRA (Efflux ABC transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGY2_9STRA) HSP 1 Score: 621 bits (1601), Expect = 3.350e-205 Identity = 350/589 (59.42%), Postives = 425/589 (72.16%), Query Frame = 1
Query: 454 LARPESHLIGGAIGLLLGTTGISLAVPKVMGGLIDSVMQGMGTYTPWEAAAILMGMFGVQSVMLTARVGLMAVAGERVAARLRNLAFGSMIVQETAFFDRNRTGDLVNRLASDVLLVQGSVTTSAAQGLRNLMMVVGCTGMLTFLSPELAVVSVAVFPPVAGVGVWFGRRLKKQQKKVQEALAGSSSVAEEVISNIRTVRQFSAEFREKDRYSEKVDVSYQMARRVGVTDAFFSGSMHFGGHASLCAVMALGGQQVASGALSVGDMTSFLLYSTFLAVNFGGLTGVYSQVMRALGASERVMAIISSAEAPTATATGDTISSGSISTAASNNLEIAGGAALGSTVAGRVIFKDVHFSYPTRPHAPVLGGMTLEVEAGSSLAIVGASGCGKSTVLRLLTRLYDPQSGTIELDGVPLRTLEPRGLRDR-VGVVEQEPVLFGGTVADNIRYGRPEATQKEVESAAAVANASAFIEAFPDGYDTQVGEGGVQMSGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVTEGRTSLIVAHRLSTVRSMADKICVLNKGEVVEIGSYAELANKPDGHFRRLVQYQM 2217
LARPE LIG + LL GT+ +SLA P+VMGGLID+VM G GT TP+EAAA+LMG+F +QS+ML R ++VAGER+AARLR F ++ Q+ AFFD N TG+LVNRLASDVLLVQ ++T+S AQGLR+L +V G + M+ +SP LA VSVA+FPPV G G +FGR+LK QQK VQ ALAGSS VAEEVI +I TVR F AE RE RY+ KV+ S +A RVGVT A F GSMH G HASL AVMA GG Q+ +GAL+VGDMTSFLLYSTF+A+N GL VY+ MRA+GAS+RVM II AE G GA L + V G + F V F YPTRP VL G+ LEV+AG +LA+VG SGCGKST+ RLLTRLY+P +G++ LDGV + +L+ LR++ VG+V+QEPVLF ++ADNIRYGRPEAT EV AA VANA FI F GY TQ G G Q+SGGQ+QRIAIARAVLKDPA++LLDE +SALDS+SE VQ ALE VT GRTS+I+AHRLST R+MADKI V++ G VVE GS+ EL + G FRR+ Q+
Sbjct: 4 LARPEGRLIGSGLTLLAGTSCVSLAFPRVMGGLIDAVMGGAGTTTPYEAAAVLMGLFSLQSLMLVGRSAALSVAGERIAARLRRRLFQAVAKQDMAFFDANSTGELVNRLASDVLLVQKALTSSTAQGLRSLFLVTGSSVMMYTMSPYLAAVSVAIFPPVMGAGWYFGRKLKAQQKSVQAALAGSSGVAEEVIGSISTVRAFGAEQRECARYNTKVNDSCTLAARVGVTTAVFEGSMHLGAHASLVAVMAAGGAQLVAGALTVGDMTSFLLYSTFMALNVSGLGSVYADAMRAIGASDRVMDIIRGAEGEGERGGGSA------------------GAVL-AAVRGDIRFDGVQFLYPTRPEHQVLQGLALEVQAGKTLAVVGPSGCGKSTLCRLLTRLYEPSAGSVTLDGVDISSLDVLWLREKAVGIVDQEPVLFNASIADNIRYGRPEATDAEVVQAAKVANAHEFITQFSHGYQTQAGASGQQLSGGQRQRIAIARAVLKDPAVLLLDEFSSALDSDSEQRVQEALEHVTRGRTSIIIAHRLSTARAMADKIAVMDSGRVVESGSFDELMARDGGVFRRMYLTQV 573
BLAST of mRNA_P-littoralis_Contig17.52.1 vs. uniprot
Match: A0A7S1CN48_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CN48_9STRA) HSP 1 Score: 498 bits (1281), Expect = 6.220e-158 Identity = 276/594 (46.46%), Postives = 388/594 (65.32%), Query Frame = 1
Query: 442 RLLELARPESHLIGGAIGLLLGTTGISLAVPKVMGGLIDSVMQGMGTYTPWEAAAILMGMFGVQSVMLTARVGLMAVAGERVAARLRNLAFGSMIVQETAFFDRNRTGDLVNRLASDVLLVQGSVTTSAAQGLRNLMMVVGCTGMLTFLSPELAVVSVAVFPPVAGVGVWFGRRLKKQQKKVQEALAGSSSVAEEVISNIRTVRQFSAEFREKDRYSEKVDVSYQMARRVGVTDAFFSGSMHFGGHASLCAVMALGGQQVASGALSVGDMTSFLLYSTFLAVNFGGLTGVYSQVMRALGASERVMAIISSAEAPTATATGDTISSGSISTAASNNLEIAGGAALGSTVAGRVIFKDVHFSYPTRPHAPVLGGMTLEVEAGSSLAIVGASGCGKSTVLRLLTRLYDPQSGTIELDGVPLRTLEPRGLRDRVGVVEQEPVLFGGTVADNIRYGRPEATQKEVESAAAVANASAFIEAFPDGYDTQVGEGGVQMSGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVTEGRTSLIVAHRLSTVRSMADKICVLN-KGEVVEIGSYAELANKPDGHFRRLVQYQML 2220
RL+ LARPE+ + LLGT+ +SLA P +GG++DS + ++TPW+ A + +F QSV++ R ++ ++GER+AARLR F +++ Q+ A+FDR+RTGD++NRL +DV +VQ S+T + A GLRN + VG ML ++P LA VS+ PP+A + G +KK+Q VQEAL +++VAEE +SNIRTVR F+ E E RY + V Y+ +R V + + G++HF + LC V+ GG V SG +SVGD+T+F+LY+T+ V+ L G + VM+ L AS R+ ++I S ++ I+GG L TV G++ +DV F YP+R VL G +L++ AG++ AI G SG GKSTV LL RLYDP+ G + LDGV +R L+P LR ++G V Q+P+LF ++A+NIRYG P AT EVE AA ANA FI +FPDGYD+ VGE GVQ+SGGQ+QRI+IARA+L DPAI+ LDEATSALD+ESEH VQ AL++V GRT + VAHRLS++++ AD I VL+ G V E+G+Y EL K +G F+ LV Q++
Sbjct: 19 RLVSLARPEAARFAFVLASLLGTSAVSLAFPAAIGGVLDSAVAQSTSWTPWQVAGGMAALFAAQSVLMAVRGSVLKISGERIAARLRQALFDAIMRQDVAWFDRHRTGDVMNRLTADVQMVQNSLTNNIAMGLRNAFVGVGGVVMLVHMAPTLAAVSLVAIPPIALGWRYGGNIIKKRQLAVQEALGDTANVAEERVSNIRTVRVFAQELAEGRRYGDAVQTVYERSRGVAIASSILDGTVHFAVNLGLCGVIGYGGNMVLSGDMSVGDLTAFMLYATYCGVSLASLAGTFVDVMKGLSASTRIFSVIDSTP----------------------SIPISGGRVL-ETVRGQLTLRDVDFRYPSRTDVQVLNGFSLDIPAGATCAIAGPSGSGKSTVAALLNRLYDPERGAVLLDGVDVRELDPSWLRRQIGTVSQDPILFSASIAENIRYGNPHATDAEVEEAARTANAHQFIVSFPDGYDSLVGERGVQLSGGQRQRISIARAILGDPAIVCLDEATSALDAESEHAVQDALQKVMAGRTVVSVAHRLSSIKA-ADMIAVLDGSGRVAELGAYDELIAK-EGVFKDLVHRQLV 587
BLAST of mRNA_P-littoralis_Contig17.52.1 vs. uniprot
Match: Q1DDB6_MYXXD (Efflux ABC transporter, permease/ATP-binding protein n=22 Tax=Myxococcaceae TaxID=31 RepID=Q1DDB6_MYXXD) HSP 1 Score: 488 bits (1257), Expect = 1.930e-154 Identity = 277/613 (45.19%), Postives = 401/613 (65.42%), Query Frame = 1
Query: 382 TDPAQKASNASALALTGQARRLLELARPESHLIGGAIGLLLGTTGISLAVPKVMGGLIDSVMQGMGTYTPWEAAAILMGMFGVQSVMLTARVGLMAVAGERVAARLRNLAFGSMIVQETAFFDRNRTGDLVNRLASDVLLVQGSVTTSAAQGLRNLMMVVGCTGMLTFLSPELAVVSVAVFPPVAGVGVWFGRRLKKQQKKVQEALAGSSSVAEEVISNIRTVRQFSAEFREKDRYSEKVDVSYQMARRVGVTDAFFSGSMHFGGHASLCAVMALGGQQVASGALSVGDMTSFLLYSTFLAVNFGGLTGVYSQVMRALGASERVMAIISSAEAPTATATGDTISSGSISTAASNNLEIAGGAALGSTVAGRVIFKDVHFSYPTRPHAPVLGGMTLEVEAGSSLAIVGASGCGKSTVLRLLTRLYDPQSGTIELDGVPLRTLEPRGLRDRVGVVEQEPVLFGGTVADNIRYGRPEATQKEVESAAAVANASAFIEAFPDGYDTQVGEGGVQMSGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVTEGRTSLIVAHRLSTVRSMADKICVLNKGEVVEIGSYAELANKPDGHFRRLVQYQML 2220
+ PA + ++++ +T RRLL+LARPE + LL ++G +LA P+ +G L+D + Y A +++ +F VQ + + R+ L AGERV +RLR F +++ QE FFD RTG+L +RL+SD ++Q +VT + + LR ++ +G G+L + S +L +V +AV PPVA GV++GRR++ ++ Q+ALA S VAEE +S IRTVR F+AE E +RYS V+ S+ +A++ + + F G G+ S+ AV+ GG+ V G LSVG++TSFL+Y+ +A +F G+ +++ MRA GA+ERV ++ P A G+ + + + G V F+ VHF+YP+RP PVL G+ LE+ G +A+VG SG GKST+ LL+R YDPQ+G + LDG PL LEP LR +G+V QEP LF ++ADNIRYGRP AT +VE AA ANA A+IE FP+GY TQVGE GVQ+SGGQKQR+AIARAVLKDP +++LDEATSALD+ESEHLV+ ALER+ +GRT+LI+AHRLSTV + AD++ VL+ G V++ G++A L ++ +G +RRLV+ Q +
Sbjct: 2 SSPANDSKSSASPGVT--VRRLLKLARPELLPLAAGTLFLLISSGATLAYPRAIGDLVDQALTARDRYVVDRLAMLMLAVFTVQGIAMALRIYLFTNAGERVVSRLRKDLFRALLSQEVGFFDSRRTGELTSRLSSDTTVLQTTVTANVSMMLRYVVTALGGVGLLLYTSVQLTLVMLAVIPPVAIGGVFYGRRVRVISRQAQDALAASGEVAEEDLSGIRTVRSFAAERHEVERYSVAVERSFTLAKKRALQTSVFMGVASIAGYGSIAAVLWYGGRLVVEGGLSVGELTSFLIYTMLVAFSFSGIAELWADFMRASGAAERVFELLD--RKPAIGAGGEQL----------------------TDLRGHVQFRGVHFAYPSRPDVPVLQGLDLELRPGEVVAVVGPSGAGKSTLASLLSRFYDPQNGEVLLDGHPLTALEPEWLRRNIGMVAQEPQLFSCSIADNIRYGRPGATDAQVEEAARAANAHAYIERFPEGYGTQVGERGVQLSGGQKQRVAIARAVLKDPRLLILDEATSALDAESEHLVKDALERLMKGRTTLIIAHRLSTVAN-ADRVLVLDGGVVIQSGTHASLMSQ-EGLYRRLVERQFV 586
BLAST of mRNA_P-littoralis_Contig17.52.1 vs. uniprot
Match: UPI0013D9933D (ABC transporter transmembrane domain-containing protein n=1 Tax=Pyxidicoccus trucidator TaxID=2709662 RepID=UPI0013D9933D) HSP 1 Score: 480 bits (1236), Expect = 2.230e-151 Identity = 277/595 (46.55%), Postives = 384/595 (64.54%), Query Frame = 1
Query: 439 RRLLELARPE-SHLIGGAIGLLLGTTGISLAVPKVMGGLIDSVMQGMGTYTPWEAAAILMGMFGVQSVMLTARVGLMAVAGERVAARLRNLAFGSMIVQETAFFDRNRTGDLVNRLASDVLLVQGSVTTSAAQGLRNLMMVVGCTGMLTFLSPELAVVSVAVFPPVAGVGVWFGRRLKKQQKKVQEALAGSSSVAEEVISNIRTVRQFSAEFREKDRYSEKVDVSYQMARRVGVTDAFFSGSMHFGGHASLCAVMALGGQQVASGALSVGDMTSFLLYSTFLAVNFGGLTGVYSQVMRALGASERVMAIISSAEAPTATATGDTISSGSISTAASNNLEIAGGAALGSTVAGRVIFKDVHFSYPTRPHAPVLGGMTLEVEAGSSLAIVGASGCGKSTVLRLLTRLYDPQSGTIELDGVPLRTLEPRGLRDRVGVVEQEPVLFGGTVADNIRYGRPEATQKEVESAAAVANASAFIEAFPDGYDTQVGEGGVQMSGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVTEGRTSLIVAHRLSTVRSMADKICVLNKGEVVEIGSYAELANKPDGHFRRLVQYQML 2220
RRLL LARPE + L+GG LL+ + +LA PK +GGL+D + A +++G+F VQ V + R L AGERV +RLR F +++ QE AFFD RTG+L +RLASD ++Q +VT + + LR + +G G+L + S L V +A+ P VA V +GRR++ ++VQ+ALA SS VAEE +S IRTVR F+AE E +RY VD ++ +AR+ + F G++ G+ + AV+ GG+ V G LSVG +TSFL+Y+ ++ +F + +++ MRA GA++RV ++ A IA G V G V F+DV F+YPTRP PVL G+ LE+ G +A+VG SG GKST+ LL+R YDPQ G + LDG PL +L+P LR +G+V QEP LF ++ADNIRYGRPE+T E+E AA ANA A+I+ FP+GY TQVGE GVQ+SGGQKQR+AIARAVLKDP +++LDEATSALDSESEHLV+ ALER+ +GR++LI+AHRLSTV + AD++ VL G +++ G++A L + DG +RRLV+ Q +
Sbjct: 19 RRLLALARPELASLVGGTFFLLVSSAA-TLAYPKAIGGLVDEALGSRSREMLDGLALMMLGVFVVQGVAMALRAYLFNTAGERVVSRLRKDLFRALLSQEVAFFDARRTGELTSRLASDTTVLQNTVTANISMALRYAVQALGGVGLLFYTSARLTGVMLAIIPAVAVGAVLYGRRVRHISRQVQDALAASSEVAEEDLSGIRTVRSFAAEPHEVERYGTAVDRAFMLARQRTFQSSVFMGAVSIAGYGGIAAVLWYGGRLVVDGNLSVGALTSFLIYTMLVSFSFSAMAELWADFMRASGAADRVFELLDRKPA------------------------IASGGERLPEVRGHVEFRDVRFAYPTRPDVPVLQGLNLELRPGEVVAVVGPSGAGKSTLASLLSRFYDPQGGAVLLDGHPLTSLDPEWLRRNIGMVAQEPQLFSCSIADNIRYGRPESTDAEIEEAARAANAHAYIQRFPEGYGTQVGERGVQLSGGQKQRVAIARAVLKDPRLLILDEATSALDSESEHLVKDALERLMKGRSTLIIAHRLSTVAN-ADRVLVLEGGLIIQSGTHAALMGQ-DGLYRRLVERQFV 586
BLAST of mRNA_P-littoralis_Contig17.52.1 vs. uniprot
Match: A0A085WV65_9DELT (Lipid A export ATP-binding/permease protein MsbA n=1 Tax=Hyalangium minutum TaxID=394096 RepID=A0A085WV65_9DELT) HSP 1 Score: 480 bits (1236), Expect = 2.380e-151 Identity = 286/595 (48.07%), Postives = 388/595 (65.21%), Query Frame = 1
Query: 439 RRLLELARPESH-LIGGAIGLLLGTTGISLAVPKVMGGLIDSVMQGMGTYTPWEAAAILMGMFGVQSVMLTARVGLMAVAGERVAARLRNLAFGSMIVQETAFFDRNRTGDLVNRLASDVLLVQGSVTTSAAQGLRNLMMVVGCTGMLTFLSPELAVVSVAVFPPVAGVGVWFGRRLKKQQKKVQEALAGSSSVAEEVISNIRTVRQFSAEFREKDRYSEKVDVSYQMARRVGVTDAFFSGSMHFGGHASLCAVMALGGQQVASGALSVGDMTSFLLYSTFLAVNFGGLTGVYSQVMRALGASERVMAIISSAEAPTATATGDTISSGSISTAASNNLEIAGGAALGSTVAGRVIFKDVHFSYPTRPHAPVLGGMTLEVEAGSSLAIVGASGCGKSTVLRLLTRLYDPQSGTIELDGVPLRTLEPRGLRDRVGVVEQEPVLFGGTVADNIRYGRPEATQKEVESAAAVANASAFIEAFPDGYDTQVGEGGVQMSGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVTEGRTSLIVAHRLSTVRSMADKICVLNKGEVVEIGSYAELANKPDGHFRRLVQYQML 2220
RRLL LARPE+ LI G L++G+ G+SL P+ M +ID + + A + +F +QSV + R AGERV RLR F S++ QE AFFD +TG+L NRLASD ++Q +V+ + + LRN + +G ML + SP L +V +AV PPVA V++GR ++K K+VQ+ALA S+ VAEE +S +RTVR F+AE E RY VD ++++ARR + F F G A+ AV GG+ V G+L+VG +TSFL+YS F+A G LT +++ MRA GASERV ++ PT + ++GG L T GRV +DV F+YP+RP PVL G+ L +E G ++AIVG SG GKST+ LL RLYDPQ G I LDG L+ L+P LR ++GVV QEP+LF ++ADNIRYGR +ATQ E+E+AA ANA FI FP+GY+T VGE GVQ+SGGQKQR+AIARA+LKDP +++LDEATSALD+ESEHLV+ AL+R+ +GRT+LI+AHRLSTV AD++ VL G++V+ GS++ L + DG +RRLV+ Q +
Sbjct: 20 RRLLSLARPETRTLIAGTFFLVVGS-GMSLLYPQKMRQIIDEALGARDRAMIDQIALGMAVIFAIQSVAVALRYYFFTTAGERVVTRLRQKLFSSLMSQEVAFFDERKTGELTNRLASDTTVLQNTVSANISMVLRNGVQALGGIAMLFYTSPALTLVMLAVVPPVAVGAVFYGRGVRKLSKEVQDALANSNEVAEESLSGVRTVRSFAAEKSEVARYRSAVDRAFELARRRIRQSSTFMAVASFCGFAAAAAVFWYGGRLVVDGSLTVGGLTSFLVYSMFVAFALGALTELWADFMRAAGASERVFELMD--RQPT--------------------IPMSGGERLAHTE-GRVQLQDVRFTYPSRPDVPVLQGIELNIEPGEAVAIVGPSGSGKSTIASLLGRLYDPQGGHILLDGKDLKALDPEWLRQQIGVVAQEPLLFSSSIADNIRYGRADATQAEIEAAAKAANAHDFIMRFPEGYNTLVGERGVQLSGGQKQRVAIARAMLKDPRLLILDEATSALDAESEHLVKEALDRLMKGRTTLIIAHRLSTVMD-ADRVMVLEGGKIVQSGSHSALMGQ-DGLYRRLVERQFV 588
BLAST of mRNA_P-littoralis_Contig17.52.1 vs. uniprot
Match: A0A7S0THF0_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0THF0_HEMAN) HSP 1 Score: 479 bits (1233), Expect = 1.020e-150 Identity = 284/608 (46.71%), Postives = 387/608 (63.65%), Query Frame = 1
Query: 394 QKASNASALALTGQARRLLELARPESHLIGGAIGLLLGTTGISLAVPKVMGGLIDSVMQGMGTYTPWEAAAILMGMFGVQSVMLTARVGLMAVAGERVAARLRNLAFGSMIVQETAFFDRNRTGDLVNRLASDVLLVQGSVTTSAAQGLRNLMMVVGCTGMLTFLSPELAVVSVAVFPPVAGVGVWFGRRLKKQQKKVQEALAGSSSVAEEVISNIRTVRQFSAEFREKDRYSEKVDVSYQMARRVGVTDAFFSGSMHFGGHASLCAVMALGGQQVASGALSVGDMTSFLLYSTFLAVNFGGLTGVYSQVMRALGASERVMAIISSAEAPTATATGDTISSGSISTAASNNLEIAGGAALGSTVAGRVIFKDVHFSYPTRPHAPVLGGMTLEVEAGSSLAIVGASGCGKSTVLRLLTRLYDPQSGTIELDGVPLRTLEPRGLRDRVGVVEQEPVLFGGTVADNIRYGRPEATQKEVESAAAVANASAFIEAFPDGYDTQVGEGGVQMSGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVTE-GRTSLIVAHRLSTVRSMADKICVLNKGEVVEIGSYAELANKPDGHFRRLVQYQ 2214
+K SN + R+L L PE L+ A+ ++ TT ISL P +G L+D TP A L+ +FG+Q +M+T R G++ VAGER+AARLR F +++ Q+ +FFD RTG+L+NRLASD ++Q ++T + L++ MVVGCT ML + SP+LA+VSV V PP V V+ GR +K++Q +VQ+ALA +S AEEVI++++TVRQF+ E E RY + + Q+A VG+ + +H + SL V+ GG V +G ++ G +TSFLLYS +L N G L+G+Y +M+A+GAS R+ +I+ + A + T G A G V FKDV F YPTRP + +L G TL++E G + IVGASG GKST+ LLTRLYDP+ GT+ LDG ++ L LR V V QEPVLF ++ADNIRYGR +AT EV A VANA FI FPDGYDT VGE G+Q+SGGQKQR+AIARA++K P ++LLDEATSALDSESE LV+ A+ERV+ G T + +AHRL+T+R AD IC++ KG+V E GSYAEL K +G F++LV+ Q
Sbjct: 10 KKKSNLMSPEGRSSVMRVLRLVEPEKRLLLLAMSTIVVTTPISLFFPMAVGKLLDVATTADPIITPVTVAGALLVVFGLQGLMMTTRDGMLTVAGERMAARLRRQTFEAVLRQDMSFFDETRTGELLNRLASDTSVIQKAITNNVTSALKSAGMVVGCTAMLIYTSPKLALVSVLVLPPGGIVAVYMGRFMKRKQSEVQDALAKTSQQAEEVITSMKTVRQFAREANEAARYGGMMAETRQLATSVGIANTLLGTGIHVAANISLACVLGYGGTLVVAGEMTAGVLTSFLLYSVYLGFNVGSLSGIYGDLMKAVGASLRIFSILDREPSLPAYDSRHTTELG----------------ARLDDFNGGVEFKDVVFRYPTRPQSAILQGFTLKMEPGQVIGIVGASGSGKSTIGALLTRLYDPEQGTVLLDGHNVKDLSAEWLRGVVASVPQEPVLFAVSIADNIRYGRLDATDDEVRRVAEVANAHEFISRFPDGYDTFVGERGMQLSGGQKQRLAIARALIKQPKVLLLDEATSALDSESEKLVEQAIERVSHAGMTVVKIAHRLNTIRD-ADVICMVVKGKVEEKGSYAELM-KSNGAFKQLVKNQ 599
BLAST of mRNA_P-littoralis_Contig17.52.1 vs. uniprot
Match: UPI001CED2937 (ABC transporter transmembrane domain-containing protein n=1 Tax=Myxococcus sp. RHSTA-1-4 TaxID=2874601 RepID=UPI001CED2937) HSP 1 Score: 476 bits (1224), Expect = 7.180e-150 Identity = 276/594 (46.46%), Postives = 376/594 (63.30%), Query Frame = 1
Query: 439 RRLLELARPESHLIGGAIGLLLGTTGISLAVPKVMGGLIDSVMQGMGTYTPWEAAAILMGMFGVQSVMLTARVGLMAVAGERVAARLRNLAFGSMIVQETAFFDRNRTGDLVNRLASDVLLVQGSVTTSAAQGLRNLMMVVGCTGMLTFLSPELAVVSVAVFPPVAGVGVWFGRRLKKQQKKVQEALAGSSSVAEEVISNIRTVRQFSAEFREKDRYSEKVDVSYQMARRVGVTDAFFSGSMHFGGHASLCAVMALGGQQVASGALSVGDMTSFLLYSTFLAVNFGGLTGVYSQVMRALGASERVMAIISSAEAPTATATGDTISSGSISTAASNNLEIAGGAALGSTVAGRVIFKDVHFSYPTRPHAPVLGGMTLEVEAGSSLAIVGASGCGKSTVLRLLTRLYDPQSGTIELDGVPLRTLEPRGLRDRVGVVEQEPVLFGGTVADNIRYGRPEATQKEVESAAAVANASAFIEAFPDGYDTQVGEGGVQMSGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVTEGRTSLIVAHRLSTVRSMADKICVLNKGEVVEIGSYAELANKPDGHFRRLVQYQML 2220
RRLL LARPE ++ LL ++ SLA P+ +G L+D + A ++ +F VQ V + R L AGERV ARLR F +M+ QE AFFD RTG+L +RLASD ++Q +VT + + LR M + G +L + S L V +A+ P V V +GRR++ ++VQ+ALA +S+VAEE +S IRTVR F+AE E +RY +D + AR + F G+ G+ ++ AV+ GG+ V +G LSVG++TSFL+Y+ +A +F L ++ MRA GAS+RV ++ A IA G V G V F+DVHF+YPTRP PVL G+ LE+ G +A+VG SG GKST+ LL+R YDPQ G + LDG PL +L+P LR +G+V QEP LF ++ADNIRYGRP+AT ++E AA ANA AFI+ FP+GY TQVGE GVQ+SGGQKQR+AIARAVLKDP +++LDEATSALD+ESEHLV+ ALER+ +GRT+LI+AHRLSTV + AD++ VL G V++ G++A L + DG +RRLV+ Q +
Sbjct: 2 RRLLSLARPELPVLAAGTFFLLVSSAASLAYPQAIGDLVDEALGTRSQQMLDGLALAMLAVFVVQGVAMALRAYLFNTAGERVVARLRKDLFRAMLSQEIAFFDGRRTGELTSRLASDTTVLQNTVTANVSMALRFTMQIAGGVALLFYTSARLTGVMLAIIPAVVLGAVLYGRRVRGISRQVQDALAAASNVAEEDLSGIRTVRSFAAEPNEVERYGTAMDRVFAFARARTRETSIFLGATSIAGYGAVAAVLWYGGRLVVAGGLSVGELTSFLIYTMLVAFSFSALAELWGDFMRASGASDRVFELLDREPA------------------------IAPGGQSLPEVRGHVEFRDVHFAYPTRPDVPVLQGVNLELRPGEVVAVVGPSGAGKSTLASLLSRFYDPQGGAVLLDGHPLTSLDPHWLRRNIGMVAQEPQLFSCSIADNIRYGRPDATDAQIEEAARAANAHAFIQRFPEGYQTQVGERGVQLSGGQKQRVAIARAVLKDPRLLILDEATSALDAESEHLVKDALERLMKGRTTLIIAHRLSTVAN-ADRVLVLEGGHVIQSGTHAALMGQ-DGLYRRLVERQFV 569
BLAST of mRNA_P-littoralis_Contig17.52.1 vs. uniprot
Match: A0A2R5G1M6_9STRA (ABC transporter ATP-binding protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G1M6_9STRA) HSP 1 Score: 476 bits (1226), Expect = 4.860e-149 Identity = 285/650 (43.85%), Postives = 401/650 (61.69%), Query Frame = 1
Query: 439 RRLLELARPESHLIGGAIGLLLGTTGISLAVPKVMGGLIDSVMQGMGTYTPWEAAAILMGMFGVQSVMLTARVGLMAVAGERVAARLRNLAFGSMIVQETAFFDRNRTGDLVNRLASDVLLVQGSVTTSAAQGLRNLMMVVGCTGMLTFLSPELAVVSVAVFPPVAGVGVWFGRRLKKQQKKVQEALAGSSSVAEEVISNIRTVRQFSAEFREKDRYSEKVDVSYQMARRVGVTDAFFSGSMHFGGHASLCAVMALGGQQVASGALSVGDMTSFLLYSTFLAVNFGGLTGVYSQVMRALGASERVMAII----------SSAEAPTATATGD----------TISS--------------------GSISTAASNNLEIAGGAALGST-----------------VAGRVIFKDVHFSYPTRPHAPVLGGMTLEVEAGSSLAIVGASGCGKSTVLRLLTRLYDPQSGTIELDGVPLRTLEPRGLRDRVGVVEQEPVLFGGTVADNIRYGRPEATQKEVESAAAVANASAFIEAFPDGYDTQVGEGGVQMSGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVTEGRTSLIVAHRLSTVRSMADKICVLNKGEVVEIGSYAELANKPDGHFRRLVQYQM 2217
RR+L +A PES LIG ++G + T+ ISL P +G ++D + +P A L G+F Q ++ R ++ VAGER+ AR R F S++ Q+ FFDR+RTG+L+NRL++D LVQ SVT + GLR+ MVVG T ML + SP LA+VS++V PPV +FGR LK +Q KVQ+ALA +S+VAEEVI+NIRTVRQF++E E +Y+ ++D +Y+ A VG+ A+F GS+H + SL AV+ GG QV SG L+ G +TSFL+YS ++ N L+ VYS +MR +GAS R+ II +SA A A AT D +I S G + ++ G + L + + G + +DV F+YP R +P+L + L +E GS +A+VG+SG GKST+ +L R+YDPQ G + +DGV +R ++P LR +GVV QEPVLF GT+ +NIRYG +A+ +V +AA A A FIE FP+G++T+VGE GVQ+SGGQKQR+AIARA+LKDP I++LDEATSALD+ESE VQ A+E + +GR+ + +AHRLST+R+ AD I VL +G + E GS+ EL K + LV+ Q+
Sbjct: 5 RRILGMAAPESRLIGASMGTQVITSSISLVFPAAIGRILDLSLSDSTGLSPTLVAGTLTGLFIFQGALIVGRTAMLNVAGERLIARFRKQLFASILAQDLHFFDRSRTGELINRLSTDTQLVQKSVTGNLVSGLRSSFMVVGGTMMLFYTSPTLALVSLSVIPPVGVAARYFGRYLKGRQAKVQDALAETSTVAEEVIANIRTVRQFASEPLEVAKYNARIDTAYRRACEVGLASAWFDGSVHLAANFSLVAVLTFGGSQVMSGQLTAGALTSFLMYSLYVGFNITNLSSVYSDLMRGVGASSRIFGIIDRVPQMPSSITSARASRAGATTDPSTLPPSVLHSIYSLLDADEDPSQKKHPIGADFFGIVQEERDRHITPPGTSVLARSGYDELADQISATLETPPIKGEIELRDVSFAYPLRSESPILQNLNLRLERGSMMALVGSSGSGKSTIGAMLMRMYDPQQGVVLIDGVDIRRIDPHWLRKHIGVVAQEPVLFSGTIEENIRYGNMDASMDQVYNAARAARALDFIEGFPNGFNTRVGERGVQLSGGQKQRVAIARAILKDPPIVILDEATSALDAESEFQVQQAIEEMMKGRSVVSIAHRLSTMRA-ADTIAVLEQGRIAEQGSFDELMQKGSA-LQNLVKRQL 652
BLAST of mRNA_P-littoralis_Contig17.52.1 vs. uniprot
Match: A0A6I2GXX0_9DELT (ATP-binding cassette domain-containing protein n=2 Tax=Cystobacterineae TaxID=80811 RepID=A0A6I2GXX0_9DELT) HSP 1 Score: 470 bits (1210), Expect = 1.310e-147 Identity = 279/594 (46.97%), Postives = 381/594 (64.14%), Query Frame = 1
Query: 442 RLLELARPESH-LIGGAIGLLLGTTGISLAVPKVMGGLIDSVMQGMGTYTPWEAAAILMGMFGVQSVMLTARVGLMAVAGERVAARLRNLAFGSMIVQETAFFDRNRTGDLVNRLASDVLLVQGSVTTSAAQGLRNLMMVVGCTGMLTFLSPELAVVSVAVFPPVAGVGVWFGRRLKKQQKKVQEALAGSSSVAEEVISNIRTVRQFSAEFREKDRYSEKVDVSYQMARRVGVTDAFFSGSMHFGGHASLCAVMALGGQQVASGALSVGDMTSFLLYSTFLAVNFGGLTGVYSQVMRALGASERVMAIISSAEAPTATATGDTISSGSISTAASNNLEIAGGAALGSTVAGRVIFKDVHFSYPTRPHAPVLGGMTLEVEAGSSLAIVGASGCGKSTVLRLLTRLYDPQSGTIELDGVPLRTLEPRGLRDRVGVVEQEPVLFGGTVADNIRYGRPEATQKEVESAAAVANASAFIEAFPDGYDTQVGEGGVQMSGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVTEGRTSLIVAHRLSTVRSMADKICVLNKGEVVEIGSYAELANKPDGHFRRLVQYQML 2220
RLL LARPE L+ G + L++G+ G+SL P+ M +ID + AA + +F VQ+V + R L AGERV RLR F S++ QE AFFD RTG+L +RLASD ++Q +V+T+ + GLRN VG +L + SP L ++ +A+ P VA V +GRR+++ K+VQ+ALA ++ VAEE ++ IRTVR F+AE E RY +V+ +Y++ARR A F G+ FGG+A+ V+ GG+ V G LSVG +TSFL+YS +A + G L +++ MRA GA+ERV ++ A GG S V GRV F+ V F+YP+RP APVL ++L + G +A+VG SG GKST+ LL RLYDPQ G + LDG PL L+P LR ++G+V QEP+LF ++A+NIRYGRP A+ EVE+AA A+A FI FP GY+T+VGE GVQ+SGGQKQR+AIARAVLKDP +++LDEATSALD+ESEHLV+ AL+ + GRT+LI+AHRLSTV A ++ VL KG VV+ GS+ L + DG +RRLV+ Q +
Sbjct: 18 RLLSLARPERRRLLWGTLFLVIGS-GMSLLYPQAMKLIIDEALGARSRQLIDRAALGMALIFAVQAVAVALRAYLFNTAGERVVTRLRQRLFASLMSQEVAFFDERRTGELTSRLASDTAVLQSTVSTNISMGLRNAATAVGAVALLFYTSPVLTLLMLAIVPAVAVGAVTYGRRVRRLSKEVQDALASANEVAEEGLAGIRTVRAFAAEPAEVARYGARVEHAYELARRRARQSATFLGAASFGGYAAAAIVLWYGGRLVVDGRLSVGGLTSFLVYSLLVAFSLGALADLWADFMRASGAAERVFELVDRTPAIPP-----------------------GGGERPSRVEGRVEFERVRFAYPSRPAAPVLQDVSLSLAPGEVVAVVGPSGAGKSTLAALLARLYDPQGGRLLLDGRPLAQLDPAWLRGQLGIVAQEPLLFSASLAENIRYGRPGASDAEVEAAARAAHAHEFISHFPQGYETRVGERGVQLSGGQKQRVAIARAVLKDPRLLVLDEATSALDAESEHLVKDALDHLMRGRTTLIIAHRLSTVAG-AHRVLVLEKGRVVQSGSHQSLMAE-DGLYRRLVERQFV 585 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig17.52.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig17.52.1 >prot_P-littoralis_Contig17.52.1 ID=prot_P-littoralis_Contig17.52.1|Name=mRNA_P-littoralis_Contig17.52.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=742bp MLRPASRHARQQCCSRVYATPCRPQQQRGLRTAVTAVLRGAQQHQALRTPback to top mRNA from alignment at P-littoralis_Contig17:247177..269001- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig17.52.1 ID=mRNA_P-littoralis_Contig17.52.1|Name=mRNA_P-littoralis_Contig17.52.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=21825bp|location=Sequence derived from alignment at P-littoralis_Contig17:247177..269001- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig17:247177..269001- >mRNA_P-littoralis_Contig17.52.1 ID=mRNA_P-littoralis_Contig17.52.1|Name=mRNA_P-littoralis_Contig17.52.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2226bp|location=Sequence derived from alignment at P-littoralis_Contig17:247177..269001- (Pylaiella littoralis U1_48)back to top |