mRNA_P-littoralis_Contig1025.17.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1025.17.1 vs. uniprot
Match: D7FXD3_ECTSI (DDE-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXD3_ECTSI) HSP 1 Score: 155 bits (391), Expect = 4.580e-44 Identity = 78/166 (46.99%), Postives = 108/166 (65.06%), Query Frame = 1
Query: 1 GKEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNKS-GSAKKPGKNSLSYEHLPDKRTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTS 492
GKEK R+T+ LAV GD +KV R I+KG P + G A +P KNS+++E LP+ R+ GYP GG+S GVQ+ SWCD + W+ + RP + S QRP +LVLDDF+CH+++ F +L A T+V+ + GGLTP+ QPLDR +NK KR +R YT+
Sbjct: 87 GKEKERFTLCLAVTGDCKKVPLRTIFKGTPLIPPDRPGKGKATQPRKNSIAWEMLPENRSKNGYPVGGMSFGVQEKSWCDLRECKLWIKHSWTLRPNNGSLVKQRPCILVLDDFKCHKDDTFIAELKRQANTIVIFIPGGLTPLLQPLDRMLNKRMKRLLRGMYTN 252
BLAST of mRNA_P-littoralis_Contig1025.17.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE) HSP 1 Score: 154 bits (388), Expect = 5.500e-42 Identity = 77/166 (46.39%), Postives = 111/166 (66.87%), Query Frame = 1
Query: 1 GKEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVG-GTNKSGSAKKPGKNSLSYEHLPDKRTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTS 492
GKEK R+T+VLAV DG+KV PRII+KG PF+ + G + P KNS+++E P R +PA G+S GVQ+ SW D + + W++ + RP + S QRP +LVLDDF+CH++E + L A T+V+++ GGLTP+ QPLDR +NK+ KR +R +YT+
Sbjct: 149 GKEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTA 314
BLAST of mRNA_P-littoralis_Contig1025.17.1 vs. uniprot
Match: A0A6H5L4U1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4U1_9PHAE) HSP 1 Score: 149 bits (377), Expect = 1.150e-41 Identity = 76/166 (45.78%), Postives = 109/166 (65.66%), Query Frame = 1
Query: 1 GKEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGT-NKSGSAKKPGKNSLSYEHLPDKRTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTS 492
GKEK R+T+VLAV DG+KV PRII+KG PF+ T + G + P KNS+++E P R +PA G+S GVQ SW D + + W++ + RP + S QRP +LVLDDF+CH++E F L A T+++ + GG+T + QPLDR +NK+ KR +R +YT+
Sbjct: 10 GKEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEIHPANRAKHAHPANGMSFGVQGKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIIIFIPGGMTLLLQPLDRLLNKQMKRLLRGKYTA 175
BLAST of mRNA_P-littoralis_Contig1025.17.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE) HSP 1 Score: 154 bits (388), Expect = 1.290e-41 Identity = 79/166 (47.59%), Postives = 110/166 (66.27%), Query Frame = 1
Query: 1 GKEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGT-NKSGSAKKPGKNSLSYEHLPDKRTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTS 492
GKEK R+T+VLAV DG+KV PRII+KG PF T + G + P KNS+++E P R G+PA G+S GVQ+ SW D + + W++ + RP + S QRP +LVLDDF+CH++E F L A T+V+ + G LTP+ QPLDR +NK+ KR +R +YT+
Sbjct: 149 GKEKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTA 314
BLAST of mRNA_P-littoralis_Contig1025.17.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE) HSP 1 Score: 153 bits (387), Expect = 7.830e-41 Identity = 82/167 (49.10%), Postives = 108/167 (64.67%), Query Frame = 1
Query: 1 GKEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVG-GTNKSGSAKKPGKNSLSYEHLPDKRTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTS 492
GKEK R+T+ LAV DG KV RII+KG PFV T G A +P KNS+++E LP R+ G P GG+S GVQ+ SWCD + W+ + RP GS R QR +LVLDDF+CH+++ F L A T+V+ + GGLTP+ QPLDR +NK+ KR +R YT+
Sbjct: 262 GKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVR-QRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTA 427
BLAST of mRNA_P-littoralis_Contig1025.17.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE) HSP 1 Score: 154 bits (389), Expect = 1.050e-40 Identity = 77/166 (46.39%), Postives = 110/166 (66.27%), Query Frame = 1
Query: 1 GKEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGT-NKSGSAKKPGKNSLSYEHLPDKRTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTS 492
G EK R+T+VLAV DG+KV PRII++G PF+ T + G + +P KN +++E P R G+PA G+S GVQ+ SW D + + W++ + RP + S QRP +LVLDDF+CH +E F L A T+V+ + GGLTP+ QPLDR +NK+ KR +R +YT+
Sbjct: 344 GNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTA 509
BLAST of mRNA_P-littoralis_Contig1025.17.1 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE) HSP 1 Score: 150 bits (378), Expect = 2.170e-40 Identity = 77/166 (46.39%), Postives = 110/166 (66.27%), Query Frame = 1
Query: 1 GKEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGT-NKSGSAKKPGKNSLSYEHLPDKRTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTS 492
G+EK R+T+VLAV DG+KV RII+ G PF+ T + G + P KNS+++E P R G+PA G+S GVQ+ SW D + + W + + RP + S QRP +LVLDDF+CH++E F L A T+V+ + GGLTP+ QPLDR +NK+ KR +R++YT+
Sbjct: 83 GEEKERFTLVLAVTADGKKVSLRIIFMGTPFIPPTVSGKGKSTLPRKNSVAWEMHPTNRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQTKRLLRSKYTA 248
BLAST of mRNA_P-littoralis_Contig1025.17.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE) HSP 1 Score: 151 bits (382), Expect = 2.020e-39 Identity = 81/167 (48.50%), Postives = 108/167 (64.67%), Query Frame = 1
Query: 1 GKEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVG-GTNKSGSAKKPGKNSLSYEHLPDKRTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTS 492
GKEK R+T+ LAV DG+KV RII+KG PFV T G A +P KNS+++E LP R+ G P GG+S GVQ+ SWCD + W+ + RP GS R QR +LVLDDF+CH+++ F L A T+V+ + GGL P+ QPLDR +NK+ KR +R YT+
Sbjct: 303 GKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVR-QRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLIPLFQPLDRMLNKQMKRLLRGMYTA 468
BLAST of mRNA_P-littoralis_Contig1025.17.1 vs. uniprot
Match: A0A6H5KT06_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT06_9PHAE) HSP 1 Score: 142 bits (357), Expect = 9.560e-39 Identity = 74/164 (45.12%), Postives = 105/164 (64.02%), Query Frame = 1
Query: 1 GKEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGT-NKSGSAKKPGKNSLSYEHLPDKRTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARY 486
GKE+ R+ +VLAV DG+KV PRI +KG PF T + G + P KNS+++E P R G+PA G+S GVQ+ SW D + + W++ + RP + S QRP +LVLDDF+ H++E F L A T+V+ + GGLTP+ QPLD +NK+ KR +R +Y
Sbjct: 30 GKEQERFALVLAVMADGKKVSPRITFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGVSFGVQEKSWSDQRECNGWISGRWKLRPNNGSIVQQRPCILVLDDFKRHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDCMLNKQMKRLLRGKY 193
BLAST of mRNA_P-littoralis_Contig1025.17.1 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE) HSP 1 Score: 147 bits (372), Expect = 1.150e-38 Identity = 78/162 (48.15%), Postives = 105/162 (64.81%), Query Frame = 1
Query: 16 RYTVVLAVRGDGQKVRPRIIYKGNPFVG-GTNKSGSAKKPGKNSLSYEHLPDKRTSFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTS 492
R+T+ LAV DG+KV RII+KG PFV T G A +P KNS+++E LP R+ G P GG+S GVQ+ SWCD + W+ + RP GS R QR +LVLDDF+CH+++ F L A T+V+ + GGLTP+ QPLDR +NK+ KR +R YT+
Sbjct: 274 RFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVR-QRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTA 434 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1025.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1025.17.1 >prot_P-littoralis_Contig1025.17.1 ID=prot_P-littoralis_Contig1025.17.1|Name=mRNA_P-littoralis_Contig1025.17.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=164bp GKEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNKSGSAKKPGKNSLSback to top mRNA from alignment at P-littoralis_Contig1025:55515..56008- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1025.17.1 ID=mRNA_P-littoralis_Contig1025.17.1|Name=mRNA_P-littoralis_Contig1025.17.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=494bp|location=Sequence derived from alignment at P-littoralis_Contig1025:55515..56008- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1025:55515..56008- >mRNA_P-littoralis_Contig1025.17.1 ID=mRNA_P-littoralis_Contig1025.17.1|Name=mRNA_P-littoralis_Contig1025.17.1|organism=Pylaiella littoralis U1_48|type=CDS|length=492bp|location=Sequence derived from alignment at P-littoralis_Contig1025:55515..56008- (Pylaiella littoralis U1_48)back to top |