mRNA_P-littoralis_Contig169.16.4 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig169.16.4 vs. uniprot
Match: D7FGT9_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGT9_ECTSI) HSP 1 Score: 669 bits (1726), Expect = 3.680e-214 Identity = 624/1084 (57.56%), Postives = 702/1084 (64.76%), Query Frame = 1
Query: 643 GNNVLTPFLRAVRADSPQTIVDLVETLGDRVLADLDTADSGMTCLHFAC-KRGDYLGKMRTPPAXXXXXXXXXXXXXXXXXXXXXXXXXXVVVRLLLDSFGERPEMPHVDARDKQGFTPLHVACMHGDVGAARELLRRGATVGAXXXXXXXXXXXXXSRGHTQVMKLLLGVYGAEFAVTAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARAAQRNQVEVFRLLVGKHGARLDTVTNSKGGLLHVACEAGALDIAKLLLEGHRQGRRLFKVDARNASGDTPALLAAARGHTDVLALLVNEHGASVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGGDATLVELLTGPLGRADIGLRDGEGNQPLHIAAACGHLEAVKVLVEQAGADXXXXXXXXXXXXXXXVGTANTEIADYLREALPDEHREQQDRCKSRAGFERAGRWMRLSRATGCLQDLALDNVYLLPVPALLEAGRFPSHYEASRKKQLVAASAIPPQAQVLLVSHPWESPGNPDPSGQQFSALRRFLEEEAEXXXXXXXXXXXXXXXXRG----GFGYVWLSFSCASSNRMKPSFQTHLNNVLTAWCFCDHALVIPEVVTRSSEGFAYTDVEGFVERGWCCVELLCALHLDVPTTVHVALKDTLSDVAAACHLLQQSEEEGVDA------------EAELLPPSSVFEPLFTEAAREEQESPSEYKSPAETSEKAPRGSSPXXXXXXXXSKDGDGTSSNKHRLSSRFSAGRCLTRAMKGAARRLSYSPADAAXXXXXXXXXXSPVAKSVTGATRGNEETVV----------DGRFFPAKGLEATEESAHIVNLIWSPGAEAHLNNICRLVANVLRSLDDEVSRDWLCSGSVTGDVVETSRELIRGGRGDVPADSKAGLLLGRVLNLGMEKQDVEEDGGGGGEGERGEAIACPLVRELYEKLGVFSSTRERLDAVKTLLLAGCYFEGVRAAAATGSSRLSSPPRVSLA 3813
G + +TPFL AVR+ + Q IV LVE +GD VL D +T D G +CLH A +RGD +VRL+LD++ E +PHVDARD+QGF+PLHVACMHG+V A +LLRRGA VGA SRGH++++KLL GVYGAE AV AGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGGD LVELLTGPLGRADIGLRDG G+Q LHIAA CGHL VKVLVE+AGAD V NT++ADYLREALP+ HRE+ RCK R GFERAGRWMRL+RA G LQ+LAL+NVYLLPV LL+ GRFPSHY+ASR+KQLVAAS I PQ+QVLLV+HPWESPGNPDPSG+QFSALRRFLE +A XXXXXXXX GFGYVWLSFSC SSNRM+P+FQTHL+NVLTAWCFCDHALV+PE VTR++EGF YTDVEG+VERGWCCV+LLCALHLDVP T+HVALKD LS+ C L E GV+ E E LPPSSVFE + S SE + ++ S ++ GS G T+ H SAG C+TRA++ A+RRLS PADA P A+ G R + +V DG FP + TEESAHI NLIWS GAEAHL++I RLVA++L+SLDDEVS D + G TG T R++I G +P DSKAGLLL RVLNLGM+KQDVEEDGGGG E GEA ACPL+RELYEKLG FSS+ +RLDAVKTLLLAGCYFEGVRA++ SR SP LA
Sbjct: 33 GESGMTPFLMAVRSGTGQAIVRLVENVGDGVLGD-NTPD-GASCLHLAAERRGDG------------------------------------IVRLMLDTWREGGLLPHVDARDRQGFSPLHVACMHGNVEEATDLLRRGAAVGAKNERGSTPLHWAASRGHSRIVKLLAGVYGAEAAVPAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGGDTDLVELLTGPLGRADIGLRDGTGSQALHIAAGCGHLGVVKVLVEKAGADLGARDSSDKSALDVAVARVNTDVADYLREALPEGHRERH-RCKRRRGFERAGRWMRLARAEGFLQNLALENVYLLPVSVLLDVGRFPSHYDASRRKQLVAASDISPQSQVLLVTHPWESPGNPDPSGKQFSALRRFLEGKAMGGSTDGGEXXXXXXXXXDSADEGFGYVWLSFSCTSSNRMRPAFQTHLDNVLTAWCFCDHALVLPETVTRAAEGFTYTDVEGYVERGWCCVKLLCALHLDVPMTMHVALKDALSEAVTNCQL-SSPERRGVEGGXXXXXXGGAEVEPENLPPSSVFELI----------SASEEGTASQVSGESV-GSHDERSQGSGHQCSGAATARRPH-----SSAGVCMTRAVQAASRRLSSCPADAGAAGAACSPMPPP-AEIPPGGERDSAASVSGPGPAVHSPPDGGIFPEHREQPTEESAHIANLIWSSGAEAHLDSITRLVADILKSLDDEVSTD-MKEGLATGGGGNT-RDVIPGE--GIPEDSKAGLLLARVLNLGMDKQDVEEDGGGG---EGGEAKACPLLRELYEKLGNFSSSHDRLDAVKTLLLAGCYFEGVRASSGH-CSRGPSPEHAKLA 1046
BLAST of mRNA_P-littoralis_Contig169.16.4 vs. uniprot
Match: A0A6H5KTJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTJ5_9PHAE) HSP 1 Score: 659 bits (1699), Expect = 1.120e-213 Identity = 456/789 (57.79%), Postives = 513/789 (65.02%), Query Frame = 1
Query: 1507 ARAAQRNQVEVFRLLVGKHGARLDTVTNSKGGLLHVACEAGALDIAKLLLEGHRQGRRLFKVDARNASGDTPALLAAARGHTDVLALLVNEHGASVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGGDATLVELLTGPLGRADIGLRDGEGNQPLHIAAACGHLEAVKVLVEQAGADXXXXXXXXXXXXXXXVGTANTEIADYLREALPDEHREQQDRCKSRAGFERAGRWMRLSRATGCLQDLALDNVYLLPVPALLEAGRFPSHYEASRKKQLVAASAIPPQAQVLLVSHPWESPGNPDPSGQQFSALRRFLEEEAEXXXXXXXXXXXXXXXXRG----GFGYVWLSFSCASSNRMKPSFQTHLNNVLTAWCFCDHALVIPEVVTRSSEGFAYTDVEGFVERGWCCVELLCALHLDVPTTVHVALKDTLSDVAAACHLLQQSEEEG------VDAEAELLPPSSVFEPLFTEAAREEQESPSEYKSPAETSEKAPRGSSPXXXXXXXXSKDGDGTSSNKHRLSSRFSAGRCLTRAMKGAARRLSYSPADAAXXXXXXXXXXSPV----------AKSVTGATRGNEETVVDGRFFPAKGLEATEESAHIVNLIWSPGAEAHLNNICRLVANVLRSLDDEVSRDWLCSGSVTGDVVETSRELIRGGRGDVPADSKAGLLLGRVLNLGMEKQDVEEDGGGGGEGERGEAIACPLVRELYEKLGVFSSTRERLDAVKTLLLAGCYFEGVRAAAATGSSRLSSPPRVSLA 3813
ARAAQRNQVEVFRLLV HGARLD VT ++ GLLHVACE+GAL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RGGD LVELLTGP GRADIGLRDG G+Q LHIAA CGHL VKVLVE+AGAD V NTE+ADYLREALP+ HRE+ RCK R GFERAGRWMRL+RA G LQ+LAL+NVYLLPV LL+ GRFPSHY+ASRKKQLVAAS I PQ+QVLLV+HPWESPGNPDPSG+QFSALRRFL+E+A GFGYVWLSFSC SSNRM+P+FQTHL+NVLTAWCFCDHALV+PE VTR++EGFAYTDVEG+VERGWCCVELLCALHL+VPTT+HVALKD LS+ C L G + E + LPPSSVFE + S SE + ++ S ++ GS G + H S G C+TRA++ AARRLS PADAA P A V+G T DG FP + TEESAHI NLIWS GAEAHL++I RLVA++L+SLD+EVS D G TG T R+++ G +P DSKAGLLL RVLNLGMEKQDVEEDGG G GEA ACPL+RELYEKLG FSS+ +RLDAVKTLLLAGCY EGVRA++ SR SP LA
Sbjct: 30 ARAAQRNQVEVFRLLVEDHGARLDAVTTNESGLLHVACESGALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGDTDLVELLTGPFGRADIGLRDGTGSQALHIAAGCGHLGVVKVLVEKAGADLGARDSSDKSALDVAVARVNTEVADYLREALPEGHRERH-RCKRRRGFERAGRWMRLARAGGFLQNLALENVYLLPVSVLLDVGRFPSHYDASRKKQLVAASDISPQSQVLLVTHPWESPGNPDPSGKQFSALRRFLDEKATAGSADGGKGRGGSAEGGDSADEGFGYVWLSFSCTSSNRMRPAFQTHLDNVLTAWCFCDHALVLPETVTRAAEGFAYTDVEGYVERGWCCVELLCALHLEVPTTIHVALKDALSEAVTNCQLSSPQRRGGEGGGGGAEIEPDNLPPSSVFELI----------SASEEGTASQVSGESV-GSYDERSQGSGHQCSGAAAARRPH-----SSVGMCMTRAVQAAARRLSSCPADAAAASAACSPMPPPAETPPSGERDSAAFVSGLGPAVHSTP-DGGIFPEHRAQPTEESAHIANLIWSSGAEAHLDSITRLVADILKSLDEEVSTDM--EGLATGGGGNT-RDVLSGE--GIPEDSKAGLLLARVLNLGMEKQDVEEDGGREG----GEAKACPLLRELYEKLGNFSSSHDRLDAVKTLLLAGCYCEGVRASSEH-RSRGPSPAHAKLA 785
BLAST of mRNA_P-littoralis_Contig169.16.4 vs. uniprot
Match: A0A6H5KW62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW62_9PHAE) HSP 1 Score: 120 bits (300), Expect = 2.970e-26 Identity = 81/206 (39.32%), Postives = 101/206 (49.03%), Query Frame = 1
Query: 643 GNNVLTPFLRAVRADSPQTIVDLVETLGDRVLADLDTADSGMTCLHFAC-KRGDYLGKMRTPPAXXXXXXXXXXXXXXXXXXXXXXXXXXVVVRLLLDSFGERPEMPHVDARDKQGFTPLHVACMHGDVGAARELLRRGATVGAXXXXXXXXXXXXXSRGHT------------------------QVMKLLLGVYGAEFAVTAGN 1185
G + +TPFL AVR+ + Q IV LVE +GD VL D+ G +CLH A +RGD +VRL+LD++ +PHVDARD+QGF+PLHVACMHG+V A +LLRRGA VGA SRGH+ Q++KLL GVYGAE AV AGN
Sbjct: 32 GESGMTPFLMAVRSGTGQAIVRLVENVGDGVLG--DSTPDGASCLHLAAERRGDG------------------------------------IVRLILDTWRAGRLLPHVDARDRQGFSPLHVACMHGNVEEATDLLRRGAAVGAKNERGSTPLHWAASRGHSRVRTRGRGNLAKRLPPDTAPLLMKQIVKLLAGVYGAEAAVPAGN 199
BLAST of mRNA_P-littoralis_Contig169.16.4 vs. uniprot
Match: A0A7S2V1E8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1E8_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 4.380e-13 Identity = 54/166 (32.53%), Postives = 79/166 (47.59%), Query Frame = 1
Query: 2293 QDLALDNVYLLPVPALLEAGRFPSHYEASRKKQLVAASAIPPQAQVLLVSHPWESPGNP----DPSGQQFSALRRFLEEEAEXXXXXXXXXXXXXXXXRGGFGYVWLSFSCASSNRMKPSFQTHLNNVL-TAWCFCDHALVIPEVVTRSSEGFAYTDVEGFVERGW 2775
Q + L+ + L+PV LLEAG+FPS+ SR++ SA+ P+A VL + H WE N DPSG QF ++ FL E +G F +VW+ SC + + +T + L A H LV+P ++ TD+EG + RGW
Sbjct: 164 QRVGLNQLLLVPVTKLLEAGKFPSYETCSRQRWHETGSAVSPRAGVLYIVHRWEEGENRKNGGDPSGSQFELVKSFLALEEN----------------KGKFDHVWIDHSCLDQDTVGSQDRTAMLACLPAALLLASHILVVPSLLN------GLTDLEGLLWRGW 307
BLAST of mRNA_P-littoralis_Contig169.16.4 vs. uniprot
Match: A0A7S2Y4A8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y4A8_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 2.620e-8 Identity = 35/121 (28.93%), Postives = 56/121 (46.28%), Query Frame = 1
Query: 2428 VLLVSHPWESPGNPDPSGQQFSALRRFLEEEAEXXXXXXXXXXXXXXXXRGGFGYVWLSFSCASSNRMKPSFQTHLNNVLTAWCFCDHALVIPEV-----VTRSSEGFAYTDVEGFVERGW 2775
VL VSH W + +PDP+G+Q+S ++FLEE ++WL +SC ++ F+ HL N+ TA D L+IP+V T+ T + +++R W
Sbjct: 39 VLFVSHRWGANDHPDPTGEQYSLAKKFLEESEIGKHIT----------------HIWLDYSCIHQDKATLDFKNHLENIPTAIACSDVVLIIPKVDYLPHTTKEGVKIPTTHLNDYLDRAW 143
BLAST of mRNA_P-littoralis_Contig169.16.4 vs. uniprot
Match: UPI001EE532ED (ankyrin repeat and KH domain-containing protein mask-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE532ED) HSP 1 Score: 60.1 bits (144), Expect = 1.610e-5 Identity = 39/95 (41.05%), Postives = 54/95 (56.84%), Query Frame = 1
Query: 1510 RAAQRNQVEVFRLLVGKHGARLDTVTNSKGGLLHVACEAGALDIAKLLLEGHRQGRRLFKVDARNASGDTPALLAAARGHTDVLALLVNEHGASV 1794
+AA +VF +LV K G L V+N+K +LH+AC G +I K LL+ +D+R+ASG TP + AA RGH D +LV E GA +
Sbjct: 9 QAASEGHKDVFDVLV-KAGTYLSQVSNNKQTILHLACRGGNTEIIKYLLK-----HTTVDIDSRDASGWTPVMQAAIRGHKDAFDVLV-ESGADL 96
BLAST of mRNA_P-littoralis_Contig169.16.4 vs. uniprot
Match: UPI00201EC8BD (ankyrin repeat domain-containing protein 17-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201EC8BD) HSP 1 Score: 58.2 bits (139), Expect = 7.770e-5 Identity = 34/94 (36.17%), Postives = 56/94 (59.57%), Query Frame = 1
Query: 1513 AAQRNQVEVFRLLVGKHGARLDTVTNSKGGLLHVACEAGALDIAKLLLEGHRQGRRLFKVDARNASGDTPALLAAARGHTDVLALLVNEHGASV 1794
AA+ EV LLVG+ GA L +T+ + +LH+AC G +++ K +L + + ++++R TP ++AA RGH +++ LLV E GA V
Sbjct: 214 AAENGHKEVVELLVGE-GADLSILTHGRDSVLHLACRGGHVEVVKYVLSQY-----MVRINSRGWQKRTPVMVAALRGHKELVELLVGE-GADV 300 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig169.16.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig169.16.4 >prot_P-littoralis_Contig169.16.4 ID=prot_P-littoralis_Contig169.16.4|Name=mRNA_P-littoralis_Contig169.16.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1179bp MAAAGGPEPASAPAAPTTAPATGYATTEERSRPAREEEGNNVLTPFLRAVback to top mRNA from alignment at P-littoralis_Contig169:35113..79005- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig169.16.4 ID=mRNA_P-littoralis_Contig169.16.4|Name=mRNA_P-littoralis_Contig169.16.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=43893bp|location=Sequence derived from alignment at P-littoralis_Contig169:35113..79005- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig169:35113..79005- >mRNA_P-littoralis_Contig169.16.4 ID=mRNA_P-littoralis_Contig169.16.4|Name=mRNA_P-littoralis_Contig169.16.4|organism=Pylaiella littoralis U1_48|type=CDS|length=3537bp|location=Sequence derived from alignment at P-littoralis_Contig169:35113..79005- (Pylaiella littoralis U1_48)back to top |