prot_P-littoralis_Contig168.68.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig168.68.1
Unique Nameprot_P-littoralis_Contig168.68.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1035
Homology
BLAST of mRNA_P-littoralis_Contig168.68.1 vs. uniprot
Match: D7FZA3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA3_ECTSI)

HSP 1 Score: 1335 bits (3454), Expect = 0.000e+0
Identity = 691/954 (72.43%), Postives = 781/954 (81.87%), Query Frame = 0
Query:   88 NRTPTTLGRDVNRVVLSSQDFLHPAIVDTMVSARD-SGVGPSARPPPPGGADTFATIARAYRGVNRRHLTLHLCEAFEESTGQPLVPSTPEGLVLLLEAMRPNTV---RHAGRPGSGSKTREFGGERAVKELLRRYEEGGKAVPLSAYEAAVKALDGPDCSVALELAREVRSKLGDSTEGLGDLYGVVMRQCELRHAPDMVLAILKERREAGGSLAPDRDAYAMALASLGRARRVSEALDLFGEMLGAGEKPSAPAVNGVLAGCARDPKKFWRHAKLMVEGMEEKWSISPNVHHYTSLVTCLLKAGQWGEAIAMTDRMEGESITPNSRYLDHMMQASVAAKQWVTAEAIFRAMTEKYGHSTIVTRQSTFHFIQAMVKQKKLRKVISYVARAQDFPLTG----RFPKGTMDTALLKWFRMIPGVTSEALAGVLVSMLDKGVRLHPDSYSVVISRANQQDGNKELSETLYNMLLAGNRAPSLSAANAVVKGSKTIEEALGIVASLRDHGLSPDKFTYAALLHCCSTAVDDDLQGQRATEVWQAMTDEGVVPHGGMLASYLLALMRSSDWKLALEVRERYRGGNEEFKLSHAERHVGKLDFVTRESAVVDGVMANGLVDNGQSKLALPYVLRVLKDREEEGISVGGSRRDESERFVDEDNHTVLAGIRACKEEGSCEIAMSLLAACEATWARGPRARDEERGGGGEGGQQGDHEWREMLVRTRLSRRRLYDCLVSVLDQRGQEFGDIRRVLESGMRNGTISLMKDQQGGTSADQAIDFHGWSTRSARCILRCLVEDLARGRDFLLEMEQYDLGRVVAAQGLREFGHVSDRWHVDSPDPRGRRREFADGVTPARFADREYGKGRKR-PEKS-RWEKPKGGWDGRGSDETQARWWEKEKRLSLIVGKPRPPPCIRNAVEEFCTLGVSPPLRIRKDASNPGILTIEPEDVVAWLGRDPRV 1031
            +R P TLGRDV R+V S QDFL P IVD MVSA   S VG         G D FA IA+AY  + R  LTL LCEAFEESTG+PLVPSTP+GLV LL AMR  +    R   RPG     RE  G R VKE+LRRYEEGGK VP+ AY+AAV+AL G  C+VALE+A+E RSKLGDS EGL ++Y  VM+QC  +  PD++  +L+ER +AGG++APD  AY +AL  LG+ARR+SEAL+LFGEML +G +P+A A+N +L+GCARD  KFWRHA  + EGM ++W ++PNV+HYTSLVTCLLKAGQW EAIA+TD+MEGE I PNSR+LDHMMQASVAAKQWVTAEAIFRAMTEKYGHS +VTRQST  FIQ+MV QKKLRKVISYVAR QD PL G    +  K TMDTALLKWFR IPGV+SEA+AGVL++MLDKGVRLHPDSYSVVIS+ANQ DGNKELS TLY MLLA N APSLSAANA +KGS TI+EAL  V +LR+ GLSPDKFT+AALLHCCS AV DDLQGQRATEVW+AM  EG+ PHGGMLASYLL+LMRS+DWK AL+VRERYRG  EEF+LSHAERHV KLDFV RE AVVDGV+ANGLVDN Q  LAL YVL VLK REEEG S  GS  D  + F+DEDNHTVLAGIRACK+ GSCE AM LL ACEA WARGP  RD  RG GGE GQ   HEWR+MLVRTRLSRRRLYDCL+SVLD++  +FGDIRRVLE GMRNG +SLMKDQQGGTSADQA+DFHGWSTRSA CI+RC++EDL  G+DFL    QYDLGR   AQGLREFG+VSDRWHVDSPDPRGRRREFADGVTPARFA+REYGKGRKR PE + RW KP+GGWDG GSDE+QARWWEK+KRLSL+VG+PRPPPCIRNAVEEFC LGVSPPLR++K ASNPGILTIEPEDV AWLGR+PR+
Sbjct:    3 DRRPATLGRDVGRMVRSGQDFLSPEIVDLMVSASTRSTVGSPPLLADTAGVDVFAVIAKAYHRLRRHDLTLQLCEAFEESTGEPLVPSTPQGLVWLLGAMRRRSTTAPRSGRRPGRHD--REGEGGREVKEVLRRYEEGGKDVPVVAYKAAVEALAGCHCTVALEMAQEARSKLGDSAEGLCEVYVAVMKQCIEQQEPDVMRDVLEERIQAGGTMAPDARAYELALGCLGKARRMSEALELFGEMLESGVQPNAIAINHMLSGCARDADKFWRHANTIFEGMAQRWGVAPNVYHYTSLVTCLLKAGQWSEAIALTDKMEGEGIPPNSRFLDHMMQASVAAKQWVTAEAIFRAMTEKYGHSNVVTRQSTMDFIQSMVMQKKLRKVISYVARIQDLPLKGPSRSKGRKNTMDTALLKWFRAIPGVSSEAMAGVLMTMLDKGVRLHPDSYSVVISKANQ-DGNKELSGTLYKMLLAANAAPSLSAANAAIKGSATIDEALATVETLREQGLSPDKFTFAALLHCCSAAVGDDLQGQRATEVWEAMCGEGIRPHGGMLASYLLSLMRSADWKTALDVRERYRGDEEEFQLSHAERHVHKLDFVAREEAVVDGVVANGLVDNKQPDLALAYVLEVLKAREEEGASDIGSDSD-LKHFIDEDNHTVLAGIRACKQVGSCETAMGLLEACEARWARGPLERDAGRGDGGEEGQWAQHEWRQMLVRTRLSRRRLYDCLISVLDEKDHDFGDIRRVLERGMRNGAVSLMKDQQGGTSADQAVDFHGWSTRSAGCIVRCIIEDLTLGQDFLHRTGQYDLGRAALAQGLREFGNVSDRWHVDSPDPRGRRREFADGVTPARFAEREYGKGRKRNPESTPRWVKPEGGWDGCGSDESQARWWEKQKRLSLVVGRPRPPPCIRNAVEEFCMLGVSPPLRVQKAASNPGILTIEPEDVQAWLGRNPRI 952          
BLAST of mRNA_P-littoralis_Contig168.68.1 vs. uniprot
Match: A0A6H5L791_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L791_9PHAE)

HSP 1 Score: 623 bits (1607), Expect = 4.770e-213
Identity = 315/404 (77.97%), Postives = 346/404 (85.64%), Query Frame = 0
Query:  632 MLASYLLALMRSSDWKLALEVRERYRGGNEEFKLSHAERHVGKLDFVTRESAVVDGVMANGLVDNGQSKLALPYVLRVLKDREE--EGISVGGSRRDESERFVDEDNHTVLAGIRACKEEGSCEIAMSLLAACEATWARGPRARDEERGGGGEGGQQGDHEWREMLVRTRLSRRRLYDCLVSVLDQRGQEFGDIRRVLESGMRNGTISLMKDQQGGTSADQAIDFHGWSTRSARCILRCLVEDLARGRDFLLEMEQYDLGRVVAAQGLREFGHVSDRWHVDSPDPRGRRREFADGVTPARFADREYGKGRKR-PEK-SRWEKPKGGWDGRGSDETQARWWEKEKRLSLIVGKPRPPPCIRNAVEEFCTLGVSPPLRIRKDASNPGILTIEPEDVVAWLGRDPRV 1031
            MLASYLLALMRS DWK AL+VRERYRG  EEF+LSHAERHV KLDFV RE AVVDGV+ANGLVDN Q  LAL YVL VLK REE  EG S  G+  D  + F+DEDNHTVLAGIRACK+ GSCE A+ LL ACEA WA+GP  RD   GGG E GQ   +EWR MLVRTRLSRRRLYDCL+SVLD++  +FGDIRRVLE+GM+NG +SLMKDQQGGTSADQA+DFHGWSTRSARCI+RC++EDL  G+DFL    QYDLGRV  AQGLREFG+VSDRWHVDSPDPRGRRREFADGVTPARFA+REYGKGRKR PEK S W KP+GGWDGRGSDE+QARWWEK+KRLSL+VGKPRPPPCIRNAVEEFC LGVSPPLR++K ASNPGILTIEPEDV AWL R+PRV
Sbjct:    1 MLASYLLALMRSGDWKTALDVRERYRGDKEEFQLSHAERHVHKLDFVAREEAVVDGVVANGLVDNKQPGLALAYVLEVLKAREEGKEGASGNGNDSD-LKHFIDEDNHTVLAGIRACKQAGSCETAIGLLEACEARWAKGPLERDAGSGGGSEEGQWAQYEWRAMLVRTRLSRRRLYDCLISVLDEKDHDFGDIRRVLETGMKNGAVSLMKDQQGGTSADQAVDFHGWSTRSARCIVRCIIEDLTLGQDFLHRTGQYDLGRVALAQGLREFGNVSDRWHVDSPDPRGRRREFADGVTPARFAEREYGKGRKRNPEKKSHWVKPEGGWDGRGSDESQARWWEKQKRLSLVVGKPRPPPCIRNAVEEFCMLGVSPPLRVQKAASNPGILTIEPEDVQAWLERNPRV 403          
BLAST of mRNA_P-littoralis_Contig168.68.1 vs. uniprot
Match: UPI001CC805E7 (pentatricopeptide repeat-containing protein At3g14330 n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC805E7)

HSP 1 Score: 59.3 bits (142), Expect = 3.630e-5
Identity = 46/141 (32.62%), Postives = 70/141 (49.65%), Query Frame = 0
Query:  318 VSEALDLFGEMLGAGEKPSAPAVNGVLAGCARDPKKFWRHAKLMVEG------MEEKWSISPNVHHYTSLVTCLLKAGQWGEAIAMTDRMEGESITPNSRYLDHMMQA-----SVAAKQWVTAEAIFRAMTEKYGHSTIVT 447
            +SEA+DLF EM+G G KP       +L+GC+        H  L VEG      ME  + +SP V HY  LV  L +AGQ  EA+ +  RM    ++P+S     ++ +     ++A  + V AE +F       G+  I++
Sbjct:  361 MSEAIDLFDEMIGMGFKPDGLTFIALLSGCS--------HVGLTVEGQRFFDRMETDYGVSPTVEHYACLVDLLGRAGQIKEALDVVKRMP---MSPSSSIWGSLLNSCRIHGNIALGE-VMAERLFEIEPNNPGNYVILS 489          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig168.68.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FZA3_ECTSI0.000e+072.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L791_9PHAE4.770e-21377.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI001CC805E73.630e-532.62pentatricopeptide repeat-containing protein At3g14... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 304..336
e-value: 2.8E-5
score: 22.0
coord: 378..409
e-value: 8.5E-5
score: 20.5
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 310..332
e-value: 0.056
score: 13.7
coord: 377..404
e-value: 0.014
score: 15.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 301..335
score: 9.996763
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 374..408
score: 10.215989
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 503..682
e-value: 2.7E-15
score: 58.5
coord: 266..477
e-value: 9.7E-26
score: 92.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 932..961
NoneNo IPR availablePANTHERPTHR47938RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATEDcoord: 268..652

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig168contigP-littoralis_Contig168:400488..417875 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig168.68.1mRNA_P-littoralis_Contig168.68.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig168 400440..418827 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig168.68.1 ID=prot_P-littoralis_Contig168.68.1|Name=mRNA_P-littoralis_Contig168.68.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1035bp
MIQYAARRACTTSLRQGKVCRWGVPRNAHIPCRSRSAGPFAVSDAWTNTN
PTTITSKTVSIQEEQQQGEAAGATEHDETESVKYYCCNRTPTTLGRDVNR
VVLSSQDFLHPAIVDTMVSARDSGVGPSARPPPPGGADTFATIARAYRGV
NRRHLTLHLCEAFEESTGQPLVPSTPEGLVLLLEAMRPNTVRHAGRPGSG
SKTREFGGERAVKELLRRYEEGGKAVPLSAYEAAVKALDGPDCSVALELA
REVRSKLGDSTEGLGDLYGVVMRQCELRHAPDMVLAILKERREAGGSLAP
DRDAYAMALASLGRARRVSEALDLFGEMLGAGEKPSAPAVNGVLAGCARD
PKKFWRHAKLMVEGMEEKWSISPNVHHYTSLVTCLLKAGQWGEAIAMTDR
MEGESITPNSRYLDHMMQASVAAKQWVTAEAIFRAMTEKYGHSTIVTRQS
TFHFIQAMVKQKKLRKVISYVARAQDFPLTGRFPKGTMDTALLKWFRMIP
GVTSEALAGVLVSMLDKGVRLHPDSYSVVISRANQQDGNKELSETLYNML
LAGNRAPSLSAANAVVKGSKTIEEALGIVASLRDHGLSPDKFTYAALLHC
CSTAVDDDLQGQRATEVWQAMTDEGVVPHGGMLASYLLALMRSSDWKLAL
EVRERYRGGNEEFKLSHAERHVGKLDFVTRESAVVDGVMANGLVDNGQSK
LALPYVLRVLKDREEEGISVGGSRRDESERFVDEDNHTVLAGIRACKEEG
SCEIAMSLLAACEATWARGPRARDEERGGGGEGGQQGDHEWREMLVRTRL
SRRRLYDCLVSVLDQRGQEFGDIRRVLESGMRNGTISLMKDQQGGTSADQ
AIDFHGWSTRSARCILRCLVEDLARGRDFLLEMEQYDLGRVVAAQGLREF
GHVSDRWHVDSPDPRGRRREFADGVTPARFADREYGKGRKRPEKSRWEKP
KGGWDGRGSDETQARWWEKEKRLSLIVGKPRPPPCIRNAVEEFCTLGVSP
PLRIRKDASNPGILTIEPEDVVAWLGRDPRVWPA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf