mRNA_P-littoralis_Contig166.103.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig166.103.3
Unique Name	mRNA_P-littoralis_Contig166.103.3
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

[Close]

BLAST of mRNA_P-littoralis_Contig166.103.3 vs. uniprot
Match: D8LSK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK9_ECTSI)

HSP 1 Score: 397 bits (1019), Expect = 6.810e-126
Identity = 301/490 (61.43%), Postives = 332/490 (67.76%), Query Frame = 2

Query:  347 MERGLRELGLKSVEELGVGPQSEKAVAESIRAKTLEFEREREAYIDAAKQLFAPPIPXXXXXXXXXXXXXXXXXXX----SDVDNVIESNRVDTGEENGGWNDGGDGQHDHLXXXXXXXXXXXXRGVGRPRSGGVSTPKANVTSLREAREERRLASEEIRTLQHRKADAKVRLQAERLSNLEHGLELGVLRLERLLDRDRILELLRLTDPNRPAVAATRPAEVSALAEGSGEXXXXXSDTGEA-----------------EVSEELIGQLEERVAEAEERMRVETARVGAAVAGRLEDRARREERSRRESLFFSLVVLDLLCTPTHSPDPSWYQESFARDEVVRLQTALRGKEERLANTVVSYLELRHAMLRAQRMESEARQDAATGRVLDEEEVRNCRTYTAEQKRAFTERVDRTCEGVGSELRRQIQLREDEACMLREQRAEAEELYEARAVRLESMLEEWKTKHAALRRRFSLETEGFRRDADNIGR 1753
            ME GL +   +SVEELGVG  ++K +AESIRAKTLEFEREREAYIDAAKQL      XXXXXXXXXXXXXXXXXXX    S    V E   V   +   G N   DG+                  + RP SG  + PKA+  S+REAREE+RLASEEIRTL +RK+DAKVRLQAERLSNLEHGLELGVLRLERLLDR+RILELLRLTDP+R     TR A + A + G   XXXXX                       EVSEE++ QLEERVAEAEER+RVE +RVGAAVA RLE+RARR                                         RLQTALRGKEERLANTVVSYLELRHAMLRAQR+ SEAR+DA  GR  DEEE+R CR+YTA Q +A TERV  TCE V SEL RQ+QLR+DE CMLREQRAEAEELYEARAVRLES+LEEWK KHAALRRRFSLETEGFRRDADNIGR
Sbjct:    1 MEHGLGDFAWESVEELGVGLDAQKTLAESIRAKTLEFEREREAYIDAAKQLLTXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSGEVEEGRGVRRLDNTPGGN--ADGRR--------------RLQLRRPWSGRGTAPKAS--SVREAREEQRLASEEIRTLHNRKSDAKVRLQAERLSNLEHGLELGVLRLERLLDRERILELLRLTDPDR--AETTRAAGMEAFSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVSEEVVEQLEERVAEAEERVRVEASRVGAAVAVRLEERARRXX-------------------------XXXXXXXXXXXXXXRLQTALRGKEERLANTVVSYLELRHAMLRAQRVASEAREDAKKGRAADEEEMRKCRSYTAYQVQAITERVKGTCEDVESELHRQVQLRKDEVCMLREQRAEAEELYEARAVRLESLLEEWKGKHAALRRRFSLETEGFRRDADNIGR 445

[Close]

BLAST of mRNA_P-littoralis_Contig166.103.3 vs. uniprot
Match: A0A6H5K077_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K077_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 3.120e-44
Identity = 102/155 (65.81%), Postives = 110/155 (70.97%), Query Frame = 2

Query: 1370 YLELRHAMLRAQRMESEARQDAATGRVLDEEEV---------------------------RNCRTYTAEQKRAFTERVDRTCEGVGSELRRQIQLREDEACMLREQRAEAEELYEARAVRLESMLEEWKTKHAALRRRFSLETEGFRRDADNIGR 1753
            + ELRHAMLRAQR+ SEAR+DA  GR  DEEE+                           R CR+Y A Q +A TERV  TCE V SEL RQIQLR+DE CMLREQRAEAEELYEARAVRLES+LEEWK KHAALRRRFSLETEGFRRDADNIGR
Sbjct:   43 FQELRHAMLRAQRVASEAREDAKKGRAADEEELKPLLSSCLRSDGALLPPFALHADTCQMRKCRSYMAYQVQAITERVKGTCEDVESELHRQIQLRKDEVCMLREQRAEAEELYEARAVRLESLLEEWKGKHAALRRRFSLETEGFRRDADNIGR 197

[Close]

BLAST of mRNA_P-littoralis_Contig166.103.3 vs. uniprot
Match: A0A6H5JSM9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSM9_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 2.320e-21
Identity = 99/180 (55.00%), Postives = 114/180 (63.33%), Query Frame = 2

Query:  347 MERGLRELGLKSVEELGVGPQSEKAVAESIRAKTLEFEREREAYIDAAKQLFAPPIPXXXXXXXXXXXXXXXXXXXSDVDNVIESNRVDTGEENGGWNDGGDGQHDHLXXXXXXXXXXXXRGVGRPRSGGVSTPKANVTSLREAREERRLASEEIRTLQHRKADAKVRLQAERLSNLEHG 886
            ME GL +   +SVEELGVG  ++K +AESIRAKTLEFE EREAYIDAAKQL      XXXXXXXXXXXXXXXXXXX              G        GG+                    + RPRSG  + PKA+  S+REAREE+RLASEEIRTLQ+RK+DAKVRLQAERL + + G
Sbjct:    1 MEHGLGDFAWESVEELGVGLDAQKTLAESIRAKTLEFESEREAYIDAAKQLLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGRGVRRLADTPGGNADGRRRLQ------------LRRPRSGRGAAPKAS--SVREAREEQRLASEEIRTLQNRKSDAKVRLQAERLRSSQTG 166

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig166.103.3 vs. uniprot

BLAST of mRNA_P-littoralis_Contig166.103.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D8LSK9_ECTSI	6.810e-126	61.43	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5K077_9PHAE	3.120e-44	65.81	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JSM9_9PHAE	2.320e-21	55.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig166	contig	P-littoralis_Contig166:455448..467204 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Model size	2522
Hectar predicted targeting category	other localisation
Exons	9
Ec32 ortholog description	hypothetical protein
Ec32 ortholog	Ec-09_002010.1
Cds size	2007

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig166.103.3	prot_P-littoralis_Contig166.103.3	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig166 455794..467035 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789805.1531386-UTR-P-littoralis_Contig166:455447..455793	1680789805.1531386-UTR-P-littoralis_Contig166:455447..455793	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig166 455448..455793 +
1680789805.2609217-UTR-P-littoralis_Contig166:467035..467204	1680789805.2609217-UTR-P-littoralis_Contig166:467035..467204	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig166 467036..467204 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789805.1647933-CDS-P-littoralis_Contig166:455793..455892	1680789805.1647933-CDS-P-littoralis_Contig166:455793..455892	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig166 455794..455892 +
1680789805.1758754-CDS-P-littoralis_Contig166:457836..458261	1680789805.1758754-CDS-P-littoralis_Contig166:457836..458261	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig166 457837..458261 +
1680789805.1849637-CDS-P-littoralis_Contig166:458922..458985	1680789805.1849637-CDS-P-littoralis_Contig166:458922..458985	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig166 458923..458985 +
1680789805.1956415-CDS-P-littoralis_Contig166:460552..460736	1680789805.1956415-CDS-P-littoralis_Contig166:460552..460736	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig166 460553..460736 +
1680789805.207761-CDS-P-littoralis_Contig166:461794..461887	1680789805.207761-CDS-P-littoralis_Contig166:461794..461887	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig166 461795..461887 +
1680789805.2168849-CDS-P-littoralis_Contig166:462566..462731	1680789805.2168849-CDS-P-littoralis_Contig166:462566..462731	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig166 462567..462731 +
1680789805.2256937-CDS-P-littoralis_Contig166:465367..465457	1680789805.2256937-CDS-P-littoralis_Contig166:465367..465457	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig166 465368..465457 +
1680789805.236584-CDS-P-littoralis_Contig166:465760..465865	1680789805.236584-CDS-P-littoralis_Contig166:465760..465865	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig166 465761..465865 +
1680789805.2481027-CDS-P-littoralis_Contig166:466252..467035	1680789805.2481027-CDS-P-littoralis_Contig166:466252..467035	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig166 466253..467035 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig166:455448..467204+
coding sequence from alignment at P-littoralis_Contig166:455448..467204+

protein sequence of mRNA_P-littoralis_Contig166.103.3

>prot_P-littoralis_Contig166.103.3 ID=prot_P-littoralis_Contig166.103.3|Name=mRNA_P-littoralis_Contig166.103.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=669bp
MERGLRELGLKSVEELGVGPQSEKAVAESIRAKTLEFEREREAYIDAAKQ
LFAPPIPPPPTLAAATVAAAETAAAASDVDNVIESNRVDTGEENGGWNDG
GDGQHDHLHHHQQQQEQQQQRGVGRPRSGGVSTPKANVTSLREAREERRL
ASEEIRTLQHRKADAKVRLQAERLSNLEHGLELGVLRLERLLDRDRILEL
LRLTDPNRPAVAATRPAEVSALAEGSGEGGGEGSDTGEAEVSEELIGQLE
ERVAEAEERMRVETARVGAAVAGRLEDRARREERSRRESLFFSLVVLDLL
CTPTHSPDPSWYQESFARDEVVRLQTALRGKEERLANTVVSYLELRHAML
RAQRMESEARQDAATGRVLDEEEVRNCRTYTAEQKRAFTERVDRTCEGVG
SELRRQIQLREDEACMLREQRAEAEELYEARAVRLESMLEEWKTKHAALR
RRFSLETEGFRRDADNIGRHEMTWGTRKEETFYSCTIILVLLVSVKVVGP
SPSPESGLFLSRSPLLMTDAQYYCGAYQTGSFPPQAPFHPSTSASSINQR
TNRREFTSFVLSFSRVRAVPPVERPAMGYETHLAVRSSPPRIIPSPLLVV
PTLYDHRGACLLFSREDYDYVVMADLSYRENMLSEQKGVQQCLPHVPVAL
FTPQAVRNPDAKKEPRHV*

mRNA from alignment at P-littoralis_Contig166:455448..467204+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig166.103.3 ID=mRNA_P-littoralis_Contig166.103.3|Name=mRNA_P-littoralis_Contig166.103.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=11757bp|location=Sequence derived from alignment at P-littoralis_Contig166:455448..467204+ (Pylaiella littoralis U1_48)
CATCGAACTGCTTTGCCACCGTGCTGCATGCAGGAAAGGCAAAGGCGTCC
CAGCAAAGCCCGTGGCAGCCAACCGGAGGGACGCTCCCCTTTGGTACCTT
TGCTCCTGATATCTCATACGCGTGAGATATCACGATTATCCTGCTGCTGT
TCGGAAATAGCCAGTTGCTCTACGAGTAGTTCAGGCACATAACACAGGCT
TGGAACACAAGCGAGGACTACTGCTGCACGGCAAGTCTATCCGCACCCGT
AAATAGTCAACGGGAGGAAAGCAGCAAAGCAGCAGGAGCAAAGCAGCAGG
AGCGTGAAAAGCGAGGATCGAGAGGGAGAGAGGGACAGGTGGGGCCATGG
AACGGGGCCTGAGAGAACTGGGTTTGAAGAGTGTCGAAGAACTCGGAGTC
GGGCCACAATCGGAGAAGGCCGTTGCGGAGTCTATCAGGGCAAAGGTGCG
CCGCTGCTGTCTCCGTTGATCCTTTCGTTTTGTGCACAGCGCGCTGCTGC
TGTCTCCGTTGATCCTTTCGTTTTGTGCACAGCACGCAATACCCGTGACC
GTAACCCGTAACCAGACAGGGGTGCAGCTCCAGGCGAGAAATGCCAGTTG
CCGATTGTGCCAAACTTGGGAAACTCTGCGGCTATGATTCGACGCCAAAC
CAAATCCCGGGTGTTTCGCCCAGGGTGCGTATGCACAGGGCCTACCTAGG
GCTCAACGCGTCGATTCGCTTGCACGACGATATATATGTATACTTCTCGA
AGTATGTGTGTTGTCATCCCATATTCTCTGGCACACTAGTCTGCACCCTG
CGGTTCAAACTACAGGCTAGGCCCATCGACGGGGTCACACAGGAGGAAGG
TCAACACAGGAGGAGTTACCCCCACCTTCCTTCTGCGGTACATGCGTGAG
ATTTTGTCTCGCGAGCAGGGATCCGCGGTCCCTACCCTCGTCGGCGAATC
GGAATCTGCTTTTACCCAACAGCATAGCCGCTTTCGAAGTAGCAAAGGAA
CACATTCACCGGGGATCGAACCCCCGTCCCTCTGCATCTAGTTGTTAACG
AGGGGACCACTAGTCCACCGGGGCGACCGGTGTCTGATATGGCACGATAC
ACTTCTGCTGTTTAGATAGCGAACAAAGTTACACAGCAGTGAGTGGCGTA
CCAGGTCTCACCTCACAGCAGTACTACCTGTACACCTGTACTTAGTGCAA
ACCAGAGGGAAGTTTCCACCAGTACGTTTGGATTTCTCCTCATTGCCACG
AACCATTCAGTTGGTGACCTCACCCTCTCTCTCTCGCCCGCAATGTCGGC
AGAAACACGCGTGCACGATGTGCAAATCCGATCGCATGATCTAGCTGAAG
GTGCCTCCCTGCTTTAGGACTGCCACGTCTGAAATGTTCCCGATCCTGCT
GTGTGTCTGGGTTGGGCACACCAGCCGGGGTCACACAGGAGGAAGGTCGA
CACATGGCATAAAGATTGGGCGTACGATGTCACACCGCTACTGCTGTACA
TCAGCCTCTCCCGATAATGCGTGTGTGTGCGATTCCAATCAGCGGTTCGA
TCTCCTCTGTAGGTAACGTTGCCGCCGTGATGTACGACTGCGTCTGGATT
TTTTCTGCGTGCACTGCTGCTGCATACCTGGTACTGTCTTTCGTGGAAGC
GCACCACCTTCTATCGCTCGCAAGATTGTTCGTATGATTCAAAGCAGTAT
GATGTCACAGAATGATACCACACGAAGTAAATCAGTGCAGCATGCAAAAG
CCGTGTGCTCAACTGCCATATGCAGCAGTGTACGGAAACCTATCGTGCAA
CGTCCCGAAGGAGGTTTACTGCTGTAGGAACACAAGGCACACGCCATCGT
TTTGATACTGGTCTATCATATCAGTGCCGTAGTGCGGTACAGCAGTAGTT
CGAACTCAACAGTAGTCGTGGTGTGGAAGGGGTTTCCTTTCTCAGCACCA
ATAGCCCGTCGCCGCCACCCAACATTCAGTCAACCGGCATTCAGTCAACC
GGCATTCCTGCTTTGTGCTCGCACGTTTGAAAGGTGTGCAGGTCTCCTCC
ACCCAGTGCTACAACTGTCTGTGTCTCCATCACCTACACGCCGTGACGAG
AGCCCTGTGCATTTGGCCACCTTTATGCTGAAAAAATCGTCCGTAAAAGT
GTGCAGCAACTTAACATGGCATGCGCGCGTGTGGCATGATGTGCGAGTAC
TTGCTGCAGTGAGACTGAACAAAAAGCACGTATAGGGTATCATTGGAAGG
GCCCGTGCGTTGGCCACCACAAATATATACGAAGTATATATAGTTCTCTA
TTCATTGCACAAGCCACAACAGCAGAACAATGAAAAACCTTCTCTCTTAT
TGCTGCTGCTGCTGCTGCTGTGCGCTGGGCATGGTGCAGACGCTGGAGTT
TGAGAGGGAAAGGGAGGCATACATCGACGCTGCGAAACAGTTATTCGCAC
CACCAATACCACCACCACCGACGCTAGCGGCAGCAACAGTCGCAGCAGCA
GAAACAGCAGCAGCAGCATCTGATGTAGATAATGTCATCGAAAGCAACAG
AGTGGACACAGGAGAAGAAAACGGTGGCTGGAATGACGGTGGAGATGGTC
AGCATGACCACCTCCACCACCACCAACAGCAGCAGGAGCAGCAGCAGCAG
CGAGGGGTGGGGCGACCGCGGTCAGGAGGAGTGTCGACGCCGAAGGCCAA
TGTTACGTCCTTGCGAGAGGCACGCGAGGAGAGGCGCCTGGCAAGCGAAG
AGATTCGCACCCTGCAACACAGGAAGGCCGACGCTAAGGTCAGGCTCCAG
GCGGAACGGCTCAGGTGTGTATGTACCCACAGGTGTTCCCCACGGTATGA
TATTGTGTTTCTTCACATGCAAACATGTTTCATCATATGTATAACAAGTT
CTCGTTTGGAATTTAGTTTTGATTGACGCGGGATATCATACTAAGGTGCC
GGATGAACCAACCAGATTGAGAGTCAGGACGGTCTTGAAAGTGTGCAGAC
AACAATTACGGAACGACAACGACGACAACAACAGCAGCAGCAAAAACAAT
AACGACGCCAAAAACAACAACGACAACGACAACAACAACGACAACAACAA
TAGGCGTCCCGCCGGTTTTAATGTTAAAACAATATCAAAGAAGTACGGAA
TCTCCATCCCCCCAGGACAGGATTGGTTCAGAGTGCTATTTTGATACTTT
GCAAACCTTGCAACGAAGGCTCGCTCAATACCACCCGCTTCACCCTACCT
TTCTTTCATTTTTCTATGGCAAAGATCTGCTGCTCTATTTTTTGCTGGAC
GTTTTTCTCATCCTGTGCATGCGTGCTAAGGGTACGAAGAAAAATGCACC
GTGAACTAACTGCATTTCGTTTTTTTGGTGTCTCTTCCCCATCCTCCCAC
AATACCCCCGGCGTTTTTCCTGACGACCCCCCCGCCCGTCCCCCCCCCCC
CGCAAACGAACCTGCTGTATTATAGCAATCTCGAGCACGGGCTAGAGCTG
GGAGTTCTACGCTTGGAGAGGCTTCTCGACCGAGACAGGTTAGAGACGGG
GGGGgaGGGGGGGGAGGGGGAACGGTTTCTTGTTTTTTTGCGTGTAATTT
TTGTTGCTTCCCCACGAAAGAGTACCATCATTCCGTTCTGTGTCGAATAT
CGTCGGCCCGTTTTCTCGGCGTTTTTTTTCTCGAATCACTCCTCGTTCAA
AAGCAGGAAAGTGTCATTCCTACCGGTCGAGACAGTTTCACCAGTGTGTT
TTGGGTTTCTCGGGAGGCCCAGCGCGCAGACCGTCGGGCAAAAAGAATGA
GGTGCCGCTTCCTTCCTTCCCCTAGCAGCATGTCAAGAGAAGCGTCAAAC
ATCTGCTTGTGTGAGAGATGGTCGCTGAGGTTTTGTCGTGGAAACCACTT
GGAGCAAGTCACCCCAAACCGCATCTCTGCGAGGTCTTTAAAACCGACGA
TTTATGCATTGATTCCAAGCACTTCGTTCGATGTGCGGCATGGTGGATTG
GTGGTGATTCAGCAGCTTTCGTGCTGCTGTATTACCACGGCAGGGCCTGT
TGAGTTTGCTGTGAACCTGGCGCTGCTTTTGCACAAGTATGTAGCACAGT
GGTTCTCAATTTTACAATTTTACCGCTACCATGAACGAATACCAGGAGAA
ACGGCGCAGCAGTACGCCATCAACCAAATATCTACCACAAACTACGCCTC
CCACCTGCTTGGTATCATGCTCACATTTCCCAGAAATTTCGTGCGTCCCA
AAAGGGAAACACCGATTCCCCTCAGCGAAAGAAATCGCTTGCGGCATCAC
CCCCGCCATAGTGTTTTGTCTCCCATCGCAACCATAACTTGAGGAACAAG
CATTACGCCCGTGTGCCGAAATCGAATCACATCGCATCATATCACATCAC
ATCACACCACATCACATCACATCACATCGCATCACATCAAATCATATCAC
ATAACACCACATTATATCACATCACATGACGTCACATGACATGACATGAC
ATGACATGACATGACATCACATCACATCACATCACATCGCACCACATGAC
ATCACGTCACATCACGTCGCGTCACATCAGATCGCATCAAATCACAGCAC
AGCACAGCACGTCACATCTTATCACATCAGATCACGTCACCTCACATGGC
ATCACATCGCATCACGTGACGTCACGTGGCATGACATCAAATCACACACA
TGACGTCACGTCACGTCACATCATACCACAACGTTTTGCTGTTGTCACCA
AAAATATATATGGTAAAAACGTTGCGCTCGACAGCCGCTGCGTGGCGCTG
CAGTGTATCGATCATCCGATGCCCACCCCGAGAAGCGCCTTTTCGCTTTG
GCCGAGGCTGCGCCTCTCAGTGCTCGGAAAGTGCGTTCCCCACGCTACAG
ACAGCAGTTGCTTCGGCGTATCACCTAGCCAGAGTCTATTTCTCACTTGA
AGTCGATATCGAGCCTGCCTCCGTTTCTTACAACAGCAGCAGTAGATCGT
CTCCTCCTTGTGGCGTCCTGCACACGCAGACTGCTGTACACTGTCCGTCC
TTCCATCAGCCACCCCTTGCTGAGTAGCACACGCCGTTCACGCCCCCCAT
CGCAGGATCTTGGAACTCCTTCGGCTGACTGATCCGAACCGTCCGGCGGT
TGCTGCGACGCGACCGGCCGAGGTGTCAGCGTTAGCTGAGGGCAGCGGCG
AAGGTGGCGGAGAAGGCTCAGACACGGGGGAGGCAGAGGTCTCGGAGGAG
CTGATCGGCCAGCTGGAGGAGCGGGTAGCCGAAGCTGAGGTAGAATGCAG
CTCATTTGTAATTTGTTGAAGCTTTTGCATGCGCCAGCCGCGATATCTCA
AGCCGCGCGTAGTGTGGACAGAAGTGCAAGTGTGAGAGACAAAAGGTCGA
CAACCTGTCGACAGATAAAATATTGTGATTGAAATACATCAAACGGTAGT
TGTATATTGCAGCACAGGTTTCCATGCACGACATGTAAATACATGCTGTA
CCAGGTTTACAGTGCAGTATTCAAGCCAAGAATTCATGAGGTACATTGCC
TGGCATGAGCCCAGTTTTACCGATGAGAGTACTGCTGTGCGAAAGGTTTG
CACCCAAAAGAGATGGGATGTCAACATACACACAGACGCAACATACACAC
AGACGCAACACACACACAGACACCACACACACGCACACACACACACCACA
CGCACATTGTTGCTGGGTGCACTGCAGTTAAGCACATGGTCGTGGCCGCC
AGAATGGGGTGTCATTTTCCTTGATTTTTCTCATCACGAGTGTGTGCTTG
TTTTAAGTGGTGGTCCGCGGTTGCTTCACTTGGTTTTAATAGTATTTTGG
GTTATTTCTTCCCACTTTTTTTGTCTACCAGTTTTATGAGCAGACATTTT
CAACGAATGCCACTCGCCCATTTTACGGTGTCGCCACCACACAAATACAC
CCAGCCTATCATACATGGGACTTTCAGATATTTCGTTGAGAACATGTGAA
GTTTGAAACCGATTTTCTTTCAGAAGACGCACAACAATTATTTCCCAAAA
GACAAGGCATGGAGACCCAAAAGCCAAACTTCGACGAAGTAGTTTCGTTT
GCCGCGGCTCATAACCTGTACCAAAGTGGCTTGTCTGCGCACATGCCAGG
GAAAGGAGATACCGGTACACACACGTTCGCTGTGACCAGTATATTTAGCT
CTGTCCAGATGAGGGTGTTGAAGCCAAACAGTTAGCAACGGACACGGGGT
GTCAATGTGCTACGAACAATGCCATACCAGTTTTTCTTTATTCAAACTCA
TTGTCTCACAAGGTATACCCGTTGATATTTCCGTTGAATTTTTTAAGGAG
CGGATGCGAGTGGAGACCGCCAGGGTGGGAGCTGCTGTGGCCGGGCGTCT
CGAAGACAGGGCTAGGCGGGAAGAGCGTAGCCGCCGGGAGGTCCGTGCTG
TATCCAGACTAATTCGTTGTATTGCGGTAAATATTGACATGGCATTCATT
CGTACTAAATAGAGCATAAATACATGCATACATGCATACATGCATACATA
CATACAAGTATATACTTCGAAGTACAAGTATATACAAGGCATACGTATGT
ACGTACATTTTAGGAGCAGAAACCTGCTGCACCTTTTTCATACCGCGGGA
GAAGGGCAGCGTGCGGCAGGTGGTTCGTGTTTTCACGTGATGTGTTGTAC
ATGCGGCTTGGTAAAAGATGTTTTCATACTCTACGCTGCTGGAAGTGCCG
GAAGCCCTCAAAGCTACAACCGCAGTAGCGTTTGTTTCGTCCCTGAACGT
TACGGAACTACCGGCCCCGTGCAAGAGCATTGTGCCGAGGAGCCACCACT
ACACTAGAGCAGTGTAACATCCAGGCCTGGATGCGTTCAAGGCTTTCCGT
CAAACTTTGACTCGAGGGAGAGGGGGAGGTCCAAGGACAGACAACACGAG
AAGCACTATGTTCATTAACTTGTGCTGAACGGTCCGGCAGGGTTTACCCC
CCTATCTCACGGCTGCTGTTGCGCGTGGAACACTTGTTGTCATTCTCACG
GCTGCTGTTGCGCGTGGAATACTTGTATTCATTGCTCTAGCGCGGCGTTA
ATCTGGACGTGGGGTGCAGTCTTTGTTTTTTTCGCTCGTTGTTCTGGATT
TGTTGTGCACCCCTACCCATTCCCCCGACCCGTCCTGGTATCAGGAGAGC
TTTGCCAGAGATGAGGTCGTGCGTCTACAGACTGCGCTCAGAGGCAAGGA
GGAGCGGCTAGCGAACACCGTTGTCAGCTATCTGGTGAGGCACGAGAGTA
GCCGTAGAGGAGACAACGAAGAGGGGGGAAATGGGCCGCGGTCTATGATA
GGGAGGCGGAGAGAGGAGAAAAAAACAAAAAAAAATAAACTGGGGCTACT
CTGCATAGCAGCAGAGAGTCACACGCAGGGGGATGCGGAGCAAAGAGCGC
CCGAGAGAGGGCGTTTGAGCAAGAGCAACGGATAAGATAAATATAAAGGA
ACAGCTGTATACAGTATCGGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAG
AGATAAGAGAAAACGGACGCAAACGAACAGAAATAGAGGGTGAGAGAAGA
TAGAACGGACGCTATCTTGAGTCGCAGGTTGTCGTTCACCTCGGATGTTT
CGTCTTTGCTTGGCGTCACCGTGGGAAAGTGTTTTAGCTGTCGGTAACAT
GGGAAGTGCGGCATGCAGGATGTCGTTTAATTCTGCGCCGTGACCGTGTA
ACGACATGATTTGTTTTCGTTGTGTCCTGTGTGGTCTGGGAGCCCTCATC
ATGTGACTGGTAAGCAAGTCGTTGTGAGAGTTTGGTCTTGTCATATGGGC
AGCAAAGAGGTACCATCAGCTGCCATGCTGCTTTCATACATATCCGAAGT
ATGCTAGAAATGAATTATACAGTATACATACGGTATATGACATGAATAAT
ATACACACACATTCGAAGTATATATATATTTGCCGACTGCGTCGTTATTC
TAGTCGTTTATCGCTGACTTATACATACATAAAACTTCGGGCTGTGCACG
AGTCAACACCGGAGTATATACACTTGGATAATTTTTGGGCAGACGCCAGA
AAGCGGTATACCGCCATGGTTCCGCGCCACCAAGCGGTACACCAAAATAC
ACCAAGGCGTTTGACCCTCATCAGCGTCGCTGATTGGCCGACTAAGCCCT
GTACCGTCTGCTGGCATCAGAATGTGGCAGTATACCGTTCCATGGCTTCT
CAGGTCGAATTGCACCGTTTTCTGGCATGGGGTGTACCGACTTCTGGCGC
CGATCACGCGGGACCACGGCACCCCCGGCGGTATATTTCGCAGACTGTTC
GTGCCGAAAAGAGTTTGGGAGAAATTTCTAGAAGGGACGAGAAATTTCAT
TCCACAACCAACATAGCCACGTCACGTCTCCATCGTGTCACGGACGTATG
CACGTTGCACGCATTGCACGGCTATTTTTGTGCACGGATGGCACGGCTCT
CTCGACCTCTGCATGCTGCGGCTTTAGGGTTCAACCTTTTAATTAAATGC
TTCACGTACTTCGTATTGCGTTTCAGTGGAGGACTTACCCCTGTGAAATC
TGAGATGGGCCAGAGGGAAAAAGATAAGCGGTTGGGCACACGCAAAGCAA
TGCCGACATGGTCCCCCAGGCTAGTACCGATAATATGTGCTGTGAGATAG
AGCGGCCCGCCTCGGGACTGCTGTTGTTGCAAGCAGGCATGTACAGGCAT
GTGCAACAAGCACGTACGTGTTGTGTGACAAACGAGGGGCGCACGGGCCG
TGTTGGTCATTCGGGTATTTGAAGTGTATATGTGGGACACGTGAGGGTAA
CAGCGGGGTGGGTATAAAGCCCGTACTAGTTGGGGGTCGCGATGGCGATT
GTGGTGTGTGCAGCCACCCCGCCAGTGGTGGAGGTGTGCGGTCACAGCGT
CGCAGCTTTGATGCCGGCAGGACTGTCGGCCGTCTTTCCCAAGCAGCATG
GAGAGATCGAGAGAGCCGTGCCATCCGTGCACAATAATAGCCGTGCAATG
CGTGCAACGTGCATACGTCCGTGACACGACGGAGACGTGACGTGGCTATG
TTGGTTGTGGAATGAAATTTCTCGTCCCTTCTAGAAATTTCTCCCAAACT
CTTTTCGGCACGAACAGTCTGCGAAATATACCGCCGGGGGTGCTGTGGTC
CCGCGTGACCGGCGCCAGAAGTCGGTACACCCCATGCCAGAAACCGGTAC
AATTCGACCTGAGAAGCCATGGAACGGTATACCGCCACATTCTGATGCCA
GCAGACGGTACAGGGCTTAGTCGGCCAATCAGCGACGCTGATGAGGGTCA
AACGCCTTGGTGTATTTTGGTGTACCGCTTGGTGGCGCGGAACCATGGCG
GTATACCGCTTTCTGGCGTCTGCCCATTATTTTTTCACTTGCGGGCGGCC
GCGGTGGTCAGTGGGGAACCTCGGAACATTCTGACACCCGCCGGTATCAC
AGGTGGTGGGTTCGAATCCCGGCTGTTTTCGTTTTGTGACCCAAAATACC
TAGGGTCGAAAAACGATAGTTTCGTGAGCATACTAAAGTAATCGACCGGA
AAAAAAGTCGACGAGAGGAAGGCATGGTCGAACTCTTCTGGCGATAGCAG
TTACGGCGAGCACCGCAAAAGAAAGGAAGGGGAAGAAAAATAAAAATAAA
AAGACAAGAAAAAGAAATAACTGCTGTGCTAACCTTCCTCCTGTGTGACC
CCGGCTGGTGCGCTCAGCTAAAACCAAAAGGTGTAGACTGGCGTCCAGAA
TTGATGGGATGACAACACACCCACACCCACACCTTTTACCCCCGCGGATA
AGTGGCGGATCCTCTTGCATTTATATTCACACCGTCGTCTATTCCTCCCG
TTTTGTACTGTGTTAAGCAGGAGCTACGGCACGCCATGCTGCGGGCCCAG
AGAATGGAGTCGGAGGCTCGACAAGACGCCGCGACCGGGAGGGTCCTCGA
CGAGGAAGAGGTGAAGGAAGCATTTCGCCTTCAGTCTCCTTTCCCCGATT
TTGCTCTGTTCAACACATTTCCAGGTGTTCATATTGGCGTGCATTCCAGG
CGGTCGGTGGCATCGTCTTTGCTCGACAAGCAGCAGCGCTTTTGATGGAT
CGTCAACTTTTTGTATTTGCTCGTTGATAATAACTTGTCATCCGTTGTCT
ACTTGTACATGTTCAATGAAAGTCCTTACCGCCACAGATGGGCCAATTTG
TTTGTCATTTGTTTGGTTCTCTTGCTGGTCCGCTGTTCCACGTACGAAAT
GTGTAACCGCCAGGTGAGGAATTGCAGGACCTACACGGCGGAGCAAAAGC
GGGCTTTCACAGAGCGGGTGGACAGGACGTGCGAGGGGGTGGGAAGCGAG
CTGCGCCGACAGATACAGGTGCATCTTTTGAAGTTGTGGTCTGTACATCG
GGCATGATACGCAATCACAAGGATTGGAGATTTCACCCGAAAAAGGAGTA
GGGGGAGGAGGAGGAGGCTCGGCGGGTTGGGGCGAAAGGCACTGTAGAGC
GGCAAATTTCGCGGGACCCCTGAGCCAGTTTCCAAAGATCGATATCGCGG
TCGACAGGAATATCGCCAGGAACCCAAACGGAGCTCGATTGTCCACGTAA
CACCAAAATGTGGCCATCGGGGCGACCGGGAGCCACTGAAAAGTCAACGA
TGGGGGTTAATTTGTTGGGGAGTGGTGTAGATGACACCCGTGTGGCCTAT
TCCGACTTTTTGACTGGCCCACGGTTGCCCTCTGAAAAAAAAAAAATGCA
ACCAGCTGCGAGAGGACGAGGCTTGCATGCTGCGGGAGCAACGGGCGGAG
GCAGAAGAGCTCTACGAGGCGCGAGCCGTCCGCCTTGAGAGCATGCTGGA
GGAGTGGAAGACCAAGCACGCCGCGCTGCGCCGGAGGTTCTCGCTAGAGA
CCGAGGGGTTCCGTCGCGATGCTGACAACATCGGAAGGCATGAAATGACA
TGGGGTACTCGCAAGGAGGAGACATTTTATTCGTGTACTATTATTCTTGT
GCTGTTGGTGTCGGTGAAGGTGGTGGGCCCTTCGCCAAGCCCCGAAAGTG
GCCTGTTTTTATCGAGGTCCCCCCTTCTGATGACAGACGCCCAATATTAT
TGCGGTGCTTACCAGACAGGTTCATTCCCGCCTCAAGCACCTTTTCACCC
TTCAACCTCCGCTAGTTCAATTAACCAAAGAACTAATCGTAGAGAGTTTA
CGTCATTTGTTTTGTCTTTCTCTCGCGTCCGCGCCGTACCTCCGGTAGAG
AGACCGGCCATGGGATACGAAACCCATCTCGCCGTCCGCTCTTCTCCACC
CCGGATTATTCCCTCCCCTCTACTCGTTGTTCCCACGTTGTATGATCATC
GTGGCGCCTGCCTGCTATTTTCGCGCGAAGACTACGATTATGTTGTGATG
GCAGATTTATCTTATCGCGAAAACATGCTGAGCGAACAAAAAGGCGTACA
GCAGTGCCTTCCTCATGTTCCTGTTGCTCTTTTCACTCCACAAGCAGTCC
GCAACCCGGATGCCAAAAAAGAACCACGGCATGTATGAAGATACGAACAT
TTCTTGGTTTTTCAGATCAAGATCTCGATCCTGTTTTGATAACACTGCTG
TATTAACCGGAGTTCAACGGCTCCATTGTTTTCGTTTTGTGACCGTAACA
AAGGCGTTTCGAGCGGATCCGTGCCGGGCCCCTGAGGGGGCGGCCGGCCA
TCTCGAG

Coding sequence (CDS) from alignment at P-littoralis_Contig166:455448..467204+

>mRNA_P-littoralis_Contig166.103.3 ID=mRNA_P-littoralis_Contig166.103.3|Name=mRNA_P-littoralis_Contig166.103.3|organism=Pylaiella littoralis U1_48|type=CDS|length=2007bp|location=Sequence derived from alignment at P-littoralis_Contig166:455448..467204+ (Pylaiella littoralis U1_48)
ATGGAACGGGGCCTGAGAGAACTGGGTTTGAAGAGTGTCGAAGAACTCGG
AGTCGGGCCACAATCGGAGAAGGCCGTTGCGGAGTCTATCAGGGCAAAGA
CGCTGGAGTTTGAGAGGGAAAGGGAGGCATACATCGACGCTGCGAAACAG
TTATTCGCACCACCAATACCACCACCACCGACGCTAGCGGCAGCAACAGT
CGCAGCAGCAGAAACAGCAGCAGCAGCATCTGATGTAGATAATGTCATCG
AAAGCAACAGAGTGGACACAGGAGAAGAAAACGGTGGCTGGAATGACGGT
GGAGATGGTCAGCATGACCACCTCCACCACCACCAACAGCAGCAGGAGCA
GCAGCAGCAGCGAGGGGTGGGGCGACCGCGGTCAGGAGGAGTGTCGACGC
CGAAGGCCAATGTTACGTCCTTGCGAGAGGCACGCGAGGAGAGGCGCCTG
GCAAGCGAAGAGATTCGCACCCTGCAACACAGGAAGGCCGACGCTAAGGT
CAGGCTCCAGGCGGAACGGCTCAGCAATCTCGAGCACGGGCTAGAGCTGG
GAGTTCTACGCTTGGAGAGGCTTCTCGACCGAGACAGGATCTTGGAACTC
CTTCGGCTGACTGATCCGAACCGTCCGGCGGTTGCTGCGACGCGACCGGC
CGAGGTGTCAGCGTTAGCTGAGGGCAGCGGCGAAGGTGGCGGAGAAGGCT
CAGACACGGGGGAGGCAGAGGTCTCGGAGGAGCTGATCGGCCAGCTGGAG
GAGCGGGTAGCCGAAGCTGAGGAGCGGATGCGAGTGGAGACCGCCAGGGT
GGGAGCTGCTGTGGCCGGGCGTCTCGAAGACAGGGCTAGGCGGGAAGAGC
GTAGCCGCCGGGAGTCTTTGTTTTTTTCGCTCGTTGTTCTGGATTTGTTG
TGCACCCCTACCCATTCCCCCGACCCGTCCTGGTATCAGGAGAGCTTTGC
CAGAGATGAGGTCGTGCGTCTACAGACTGCGCTCAGAGGCAAGGAGGAGC
GGCTAGCGAACACCGTTGTCAGCTATCTGGAGCTACGGCACGCCATGCTG
CGGGCCCAGAGAATGGAGTCGGAGGCTCGACAAGACGCCGCGACCGGGAG
GGTCCTCGACGAGGAAGAGGTGAGGAATTGCAGGACCTACACGGCGGAGC
AAAAGCGGGCTTTCACAGAGCGGGTGGACAGGACGTGCGAGGGGGTGGGA
AGCGAGCTGCGCCGACAGATACAGCTGCGAGAGGACGAGGCTTGCATGCT
GCGGGAGCAACGGGCGGAGGCAGAAGAGCTCTACGAGGCGCGAGCCGTCC
GCCTTGAGAGCATGCTGGAGGAGTGGAAGACCAAGCACGCCGCGCTGCGC
CGGAGGTTCTCGCTAGAGACCGAGGGGTTCCGTCGCGATGCTGACAACAT
CGGAAGGCATGAAATGACATGGGGTACTCGCAAGGAGGAGACATTTTATT
CGTGTACTATTATTCTTGTGCTGTTGGTGTCGGTGAAGGTGGTGGGCCCT
TCGCCAAGCCCCGAAAGTGGCCTGTTTTTATCGAGGTCCCCCCTTCTGAT
GACAGACGCCCAATATTATTGCGGTGCTTACCAGACAGGTTCATTCCCGC
CTCAAGCACCTTTTCACCCTTCAACCTCCGCTAGTTCAATTAACCAAAGA
ACTAATCGTAGAGAGTTTACGTCATTTGTTTTGTCTTTCTCTCGCGTCCG
CGCCGTACCTCCGGTAGAGAGACCGGCCATGGGATACGAAACCCATCTCG
CCGTCCGCTCTTCTCCACCCCGGATTATTCCCTCCCCTCTACTCGTTGTT
CCCACGTTGTATGATCATCGTGGCGCCTGCCTGCTATTTTCGCGCGAAGA
CTACGATTATGTTGTGATGGCAGATTTATCTTATCGCGAAAACATGCTGA
GCGAACAAAAAGGCGTACAGCAGTGCCTTCCTCATGTTCCTGTTGCTCTT
TTCACTCCACAAGCAGTCCGCAACCCGGATGCCAAAAAAGAACCACGGCA
TGTATGA