mRNA_P-littoralis_Contig166.88.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig166.88.1 vs. uniprot
Match: D8LSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK2_ECTSI) HSP 1 Score: 184 bits (467), Expect = 1.440e-55 Identity = 93/137 (67.88%), Postives = 111/137 (81.02%), Query Frame = 2
Query: 380 AGLSRSKEDLERLAGSVDIYHVNGQVFVHSTIDGIAKPKIIPTGDQARAFIQGVKAGSSSLEDLLTTALSELCKAKPEGLDAVRWLAEWLLEHNPNKPTVEQAEDQLPGGSV-EQQGGAMTVEGD-QVLRMVAMVES 784
AGLSRS+ DLERLA S+ IYHV+GQ+F+HST DGIAKPKI+PTGDQARAF++G++AG+ SLE+LLTT SELCK KPEGLDAVRWLAEWLLE+NPNKP V A+D+ G ++ GG T GD V+ MVA VES
Sbjct: 4 AGLSRSRGDLERLAESIGIYHVHGQIFIHSTFDGIAKPKIVPTGDQARAFVEGMRAGTGSLEELLTTPFSELCKVKPEGLDAVRWLAEWLLENNPNKPKVAHADDERDSGEDGDEAGGGETALGDGPVVGMVATVES 140
BLAST of mRNA_P-littoralis_Contig166.88.1 vs. uniprot
Match: A0A7S2XW71_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW71_9STRA) HSP 1 Score: 178 bits (452), Expect = 5.060e-53 Identity = 88/156 (56.41%), Postives = 115/156 (73.72%), Query Frame = 2
Query: 221 LSPLHTVGRKLEDGAMYIIELEDMSPAGVLVQAYKQETSDRYTLSISEGELSRAGLSRSKEDLERLAGSVDIYHVNG-QVFVHSTIDGIAKPKIIPTGDQARAFIQGVKAGSSSLEDLLTTALSELCKAKPEGLDAVRWLAEWLLEHNPNKPTVEQ 685
LS L+ GR+L DG MYII + D+ PAGVL++AY Q TS Y LS SE EL AGLSR KEDL+ L S+D+ ++G + F+ S++ GI PK+IP G +A FI+ + AG+ +L +LLTTALSELCK KP GLDAVRWL +WLLE+NPN+P +E+
Sbjct: 3 LSYLYVQGRQLSDGGMYIISVTDLDPAGVLIKAYNQVTSSEYYLSPSEDELEEAGLSRQKEDLKTLVESIDLTELSGGRTFLRSSLAGIKDPKVIPQGAEAAQFIKSIPAGTDTLPELLTTALSELCKVKPSGLDAVRWLGQWLLENNPNQPQIEE 158
BLAST of mRNA_P-littoralis_Contig166.88.1 vs. uniprot
Match: A0A8J2WSR2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WSR2_9STRA) HSP 1 Score: 160 bits (404), Expect = 1.020e-45 Identity = 76/155 (49.03%), Postives = 111/155 (71.61%), Query Frame = 2
Query: 230 LHTVGRKLEDGAMYIIELEDMSPAGVLVQAYKQETSDRYTLSISEGELSRAGLSRSKEDLERLAGSVDIYHVNGQVFVHSTIDGIAKPKIIPTGDQARAFIQGVKAGSSSLEDLLTTALSELCKAKPEGLDAVRWLAEWLLEHNPNKPTVEQAED 694
++ R L+D +YI+++ D SP+G+LV+AY+Q S Y + I+E EL A LSRS++ L +LA S+ + ++G++ + S+I GI KPK++P+GD R FI KAG +L D L+ ALSELCK KP GLDAVRWL +W+L++NPN+PTVE+ D
Sbjct: 8 IYNCARALDDNDIYILQMFDTSPSGLLVKAYRQTESVEYFMPITESELDNAALSRSQQALSKLAESLSLVELSGKLVLMSSITGIIKPKVLPSGDGVRQFIGRTKAGRDTLSDFLSEALSELCKEKPVGLDAVRWLGQWILKNNPNQPTVEEPTD 162
BLAST of mRNA_P-littoralis_Contig166.88.1 vs. uniprot
Match: A0A836CDF1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDF1_9STRA) HSP 1 Score: 159 bits (401), Expect = 1.660e-45 Identity = 80/151 (52.98%), Postives = 104/151 (68.87%), Query Frame = 2
Query: 251 LEDGAMYIIELEDMSPAGVLVQAYKQETSDRYTLSISEGELSRAGLSRSKEDLERLAGSVDIYHVNGQVFVHSTIDGIAKPKIIPTGDQARAFIQGVKAGSSSLEDLLTTALSELCKAKPEG---LDAVRWLAEWLLEHNPNKPTVEQAED 694
L+DG MY I + DM PAGV+++A T+ Y L +E EL+ A L R++ DL RLA SVD+ V G F++S++ GI KPKIIPTG+ A+ F+ G+ SL LLTT LSELCK KP+G +DAVRWL EWLL +NPN+P VE+ ED
Sbjct: 1 LQDGDMYTIGIFDMEPAGVVIRALNNATAKYYALGPTESELAAAKLGRNESDLARLAESVDLLEVGGTTFIYSSLPGICKPKIIPTGETAKDFMNGLTLRDGSLVQLLTTGLSELCKVKPQGPGGIDAVRWLGEWLLANNPNQPAVEEPED 151
BLAST of mRNA_P-littoralis_Contig166.88.1 vs. uniprot
Match: A0A7S2WUZ4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUZ4_9STRA) HSP 1 Score: 155 bits (393), Expect = 4.630e-44 Identity = 77/161 (47.83%), Postives = 107/161 (66.46%), Query Frame = 2
Query: 212 RKKLSPLHTVGRKLEDGAMYIIELEDMSPAGVLVQAYKQETSDRYTLSISEGELSRAGLSRSKEDLERLAGSVDIYHVNGQVFVHSTIDGIAKPKIIPTGDQARAFIQGVKAGSSSLEDLLTTALSELCKAKPEGLDAVRWLAEWLLEHNPNKPTVEQAED 694
R K + ++TVGR+L DG MYI + D+ PAG+L++AY TS T S SE EL A ++R+++ L +L S DI G + S + GI KPK++P GD R FI AGS +L +LLTTAL+ELCK KP L+AVRWL +WL+++NPN+P V + E+
Sbjct: 9 RMKKAAIYTVGRQLNDGDMYIFSVYDLEPAGLLIRAYCASTSSELTTSPSESELYAASITRAEKHLAQLCDSYDIVTKGGTPLLESNLTGINKPKLVPQGDGVRQFITATPAGSETLPELLTTALTELCKQKPAKLEAVRWLGQWLIDNNPNQPQVAEPEE 169
BLAST of mRNA_P-littoralis_Contig166.88.1 vs. uniprot
Match: F0YNF8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNF8_AURAN) HSP 1 Score: 134 bits (336), Expect = 1.380e-35 Identity = 70/150 (46.67%), Postives = 97/150 (64.67%), Query Frame = 2
Query: 245 RKLEDGAMYIIELEDMSPAGVLVQAYKQETSDRYTLSISEGELSRAGLSRSKEDLERLAGSVDIYHVNGQVFVHSTIDGIAKPKIIPTGDQARAFIQGVKAGSSSLEDLLTTALSELCKAKPEGLDAVRWLAEWLLEHNPNKPTVEQAED 694
R L D +YII++ D +P+G+LV+AY Q S Y + I+EGEL +A L+R + L RLA S+D+ G +F+ S+I GIAKPK FI +AG +L L AL+ELC+ KP GL+AV+ L EW+LEHNPN+P V++ ED
Sbjct: 13 RALNDNEIYIIQIFDNAPSGLLVKAYLQAKSLEYFMPITEGELEKAALNRGEAALTRLAESIDLVEKGGAIFLESSIPGIAKPK----------FIGRTRAGDGTLPAFLAKALAELCRDKPAGLEAVKRLGEWMLEHNPNQPAVDEPED 152
BLAST of mRNA_P-littoralis_Contig166.88.1 vs. uniprot
Match: A0A5D6Y9V0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y9V0_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 1.620e-13 Identity = 56/175 (32.00%), Postives = 85/175 (48.57%), Query Frame = 2
Query: 260 GAMYIIELEDMSPAGVLVQAYKQETSD------RYTLSISEGELSRAGLSRSKEDLERLAGSVDIYH------------VNGQVF----VHSTIDGIAKPKIIPTGDQARAFIQ----GVKAGSSSLE-------DLLTTALSELCKAKPEGLDAVRWLAEWLLEHNPNKPTVEQ 685
G + + L D+ AGV V A++ S+ +++ S EL AG++++ E L S+++ NG+ F + S + GI P I + A A+ G A SSS E D++ L+ELC++KP GLDAV+WL W LEHNP +P VE+
Sbjct: 18 GIEFEVRLFDVDTAGVAVIAFQSAASECAAPPLKFSRVFSRSELRAAGIAKTLEGFVALVDSLELVEDAYFTAQDAAASSNGEEFAAFQLSSALPGIKCPPPIVSKQAAMAYFARAPVGPAAWSSSGELASEMLLDVVAKGLAELCRSKPAGLDAVKWLGAWFLEHNPTQPHVEE 192
BLAST of mRNA_P-littoralis_Contig166.88.1 vs. uniprot
Match: A0A0P1B1F2_PLAHL (Dynein light chain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B1F2_PLAHL) HSP 1 Score: 68.6 bits (166), Expect = 2.060e-10 Identity = 46/171 (26.90%), Postives = 79/171 (46.20%), Query Frame = 2
Query: 260 GAMYIIELEDMSPAGVLVQAYK----QETSDRYTLSISEGELSRAGLSRSKEDLERLAGSV----DIYHVNGQVF-----------VHSTIDGIAKPKIIPTGDQARAFIQGVKAGSSS------------LEDLLTTALSELCKAKPEGLDAVRWLAEWLLEHNPNKPTV 679
G + I+L ++ AG+ A + Q++ ++ + S EL +AG++R+ + L S+ D+Y + S + GI+ P I + A ++ G S+ L +++ L+ELC+ KP GL+A+RWL W LEHNP +P V
Sbjct: 18 GKEFEIQLFEVDGAGITAVAIQISQEQDSPQNFSRAFSRAELEKAGINRTSKAYVALVDSLELVEDVYFTGNDAISSGQNMLTAYRLSSKLPGISSPLPIVSHHAALSYFARAPVGFSARNTSQEVEEDNLLVNVIVKGLTELCREKPSGLNALRWLGNWFLEHNPAQPLV 188
BLAST of mRNA_P-littoralis_Contig166.88.1 vs. uniprot
Match: A0A482SG18_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SG18_9ARCH) HSP 1 Score: 64.7 bits (156), Expect = 2.410e-10 Identity = 29/43 (67.44%), Postives = 32/43 (74.42%), Query Frame = 2
Query: 551 SSSLEDLLTTALSELCKAKPEGLDAVRWLAEWLLEHNPNKPTV 679
S +L DLL T L ELCK KP GLDAV+WL WLL +NPNKP V
Sbjct: 10 SQNLHDLLVTGLVELCKEKPVGLDAVKWLGNWLLANNPNKPCV 52
BLAST of mRNA_P-littoralis_Contig166.88.1 vs. uniprot
Match: A0A662WD89_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WD89_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 2.740e-10 Identity = 52/190 (27.37%), Postives = 83/190 (43.68%), Query Frame = 2
Query: 215 KKLSPLHTVGRKLEDGAMYIIELEDMSPAGVLVQAYK----QETSDRYTLSISEGELSRAGLSRSKEDLERLAGSVDIYHVNGQVF-----------------VHSTIDGIAKPKIIPTGDQARAFIQGVKAGSSS------------LEDLLTTALSELCKAKPEGLDAVRWLAEWLLEHNPNKPTVEQ 685
KK + R+ G Y + L ++ AG+ ++ Q +++ S EL AG++++ E L S+++ V F + ST+ G++ P I + A A+ G S+ L DL+ L+ELC+ KP GL AV WL WLL+HNP +P VE+
Sbjct: 3 KKYNSCSYKARRAFLGGEYEVRLFEVDDAGIAAVVFQTAGEQGAPLKFSRVFSRPELQNAGIAKTLEGHVALVNSLEL--VEDAYFTGIDATNAGQNEMAAYQLSSTLPGMSFPPPIVSQQAAMAYFMRAPVGLSTWNSSRTPEEENLLADLVVKGLTELCRQKPPGLKAVAWLGNWLLDHNPTQPKVEE 190 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig166.88.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig166.88.1 >prot_P-littoralis_Contig166.88.1 ID=prot_P-littoralis_Contig166.88.1|Name=mRNA_P-littoralis_Contig166.88.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=197bp MATSWRKKLSPLHTVGRKLEDGAMYIIELEDMSPAGVLVQAYKQETSDRYback to top mRNA from alignment at P-littoralis_Contig166:407970..411139+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig166.88.1 ID=mRNA_P-littoralis_Contig166.88.1|Name=mRNA_P-littoralis_Contig166.88.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3170bp|location=Sequence derived from alignment at P-littoralis_Contig166:407970..411139+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig166:407970..411139+ >mRNA_P-littoralis_Contig166.88.1 ID=mRNA_P-littoralis_Contig166.88.1|Name=mRNA_P-littoralis_Contig166.88.1|organism=Pylaiella littoralis U1_48|type=CDS|length=591bp|location=Sequence derived from alignment at P-littoralis_Contig166:407970..411139+ (Pylaiella littoralis U1_48)back to top |