prot_P-littoralis_Contig989.13.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig989.13.1
Unique Nameprot_P-littoralis_Contig989.13.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length123
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig989.13.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 223 bits (568), Expect = 1.750e-73
Identity = 117/122 (95.90%), Postives = 119/122 (97.54%), Query Frame = 0 
Query:    1 MSGKGNGGRGKKSVTRSAKAGLQFPVGRVGRFLKAGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVEK 122
            MSGKG GGRGKKS TRSAKAGLQFPVGRVGRFLK GKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTV+K
Sbjct:    1 MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKK 122
[Close]
BLAST of mRNA_P-littoralis_Contig989.13.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI)

HSP 1 Score: 221 bits (563), Expect = 6.030e-72
Identity = 116/121 (95.87%), Postives = 118/121 (97.52%), Query Frame = 0 
Query:    1 MSGKGNGGRGKKSVTRSAKAGLQFPVGRVGRFLKAGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVE 121
            MSGKG GGRGKKS TRSAKAGLQFPVGRVGRFLK GKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTV+
Sbjct:   46 MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 166
[Close]
BLAST of mRNA_P-littoralis_Contig989.13.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 208 bits (530), Expect = 1.670e-67
Identity = 107/119 (89.92%), Postives = 115/119 (96.64%), Query Frame = 0 
Query:    1 MSGKGNGGRGKKSVTRSAKAGLQFPVGRVGRFLKAGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKT 119
            MSGKG GGRGKKS ++S+KAGLQFPV R+GR+LK GKYA+RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK+
Sbjct:    1 MSGKGKGGRGKKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKS 119
[Close]
BLAST of mRNA_P-littoralis_Contig989.13.1 vs. uniprot
Match: D7FVQ5_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ5_ECTSI)

HSP 1 Score: 208 bits (530), Expect = 8.570e-67
Identity = 107/119 (89.92%), Postives = 115/119 (96.64%), Query Frame = 0 
Query:    1 MSGKGNGGRGKKSVTRSAKAGLQFPVGRVGRFLKAGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKT 119
            MSGKG GGRGKKS ++S+KAGLQFPV R+GR+LK GKYA+RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK+
Sbjct:   52 MSGKGKGGRGKKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKS 170
[Close]
BLAST of mRNA_P-littoralis_Contig989.13.1 vs. uniprot
Match: D8LLP0_ECTSI (Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP0_ECTSI)

HSP 1 Score: 205 bits (521), Expect = 2.330e-66
Identity = 105/118 (88.98%), Postives = 112/118 (94.92%), Query Frame = 0 
Query:    1 MSGKGNGGRGKKSVTRSAKAGLQFPVGRVGRFLKAGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 118
            MSGKG GGRGKK  +RSAKAGLQFPVGR+GRF+K GKY+SRVG GAPVY+AAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELN+LLG+ TIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRGKKITSRSAKAGLQFPVGRIGRFIKQGKYSSRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNRLLGDATIASGGVLPNIHAVLLPKK 118
[Close]
BLAST of mRNA_P-littoralis_Contig989.13.1 vs. uniprot
Match: A0A6H5KGY1_9PHAE (Integrase catalytic domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGY1_9PHAE)

HSP 1 Score: 220 bits (561), Expect = 3.280e-64
Identity = 116/120 (96.67%), Postives = 117/120 (97.50%), Query Frame = 0 
Query:    1 MSGKGNGGRGKKSVTRSAKAGLQFPVGRVGRFLKAGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTV 120
            MSGKG GGRGKKS TRSAKAGLQFPVGRVGRFLK GKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTV
Sbjct:    1 MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTV 120
[Close]
BLAST of mRNA_P-littoralis_Contig989.13.1 vs. uniprot
Match: A0A836CG77_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG77_9STRA)

HSP 1 Score: 197 bits (502), Expect = 2.540e-63
Identity = 104/124 (83.87%), Postives = 112/124 (90.32%), Query Frame = 0 
Query:    1 MSGKGNGGRG---KKSVTRSAKAGLQFPVGRVGRFLKAGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVE 121
            M+GKG GGRG   KKS ++S+KAGLQFPV R+GRFLK G+YA RVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHIQLAVRNDEELNKLLG VTIASGGVLPNIHAVLLPKKT  
Sbjct:    1 MAGKGKGGRGAEAKKSTSKSSKAGLQFPVARLGRFLKVGRYAERVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHAVLLPKKTAS 124
[Close]
BLAST of mRNA_P-littoralis_Contig989.13.1 vs. uniprot
Match: A0A835ZLE9_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE9_9STRA)

HSP 1 Score: 198 bits (503), Expect = 2.560e-63
Identity = 103/121 (85.12%), Postives = 114/121 (94.21%), Query Frame = 0 
Query:    3 GKGNGGRG-KKSVTRSAKAGLQFPVGRVGRFLKAGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVEK 122
            GKG GGRG KK+V++SAKAGLQFPVGRVGRFLK G+YA RVGAGAPVY+AAV+EYL AEVLEL+GNAARDNKK+RI+PRHIQLAVRNDEELNKLLG+VTIA+GGVLPNIHAVLLPKKT  K
Sbjct:    5 GKGKGGRGDKKAVSKSAKAGLQFPVGRVGRFLKQGRYAKRVGAGAPVYMAAVMEYLCAEVLELSGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGKVTIAAGGVLPNIHAVLLPKKTRSK 125
[Close]
BLAST of mRNA_P-littoralis_Contig989.13.1 vs. uniprot
Match: A0A7S3CML3_9SPIT (Histone H2A (Fragment) n=1 Tax=Strombidium rassoulzadegani TaxID=1082188 RepID=A0A7S3CML3_9SPIT)

HSP 1 Score: 198 bits (503), Expect = 2.920e-63
Identity = 106/123 (86.18%), Postives = 114/123 (92.68%), Query Frame = 0 
Query:    1 MSGKGNG-GRGKKSVTRSAKAGLQFPVGRVGRFLKAGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVEK 122
            MSGKG G   GKK+V+RSAKAGLQFPVGRV R+LK GKYA+RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKK RIVPRHIQLAVRNDEEL+KLLG VTIA+GGVLPNIH+VLLPKK+ EK
Sbjct:   19 MSGKGKGRAPGKKAVSRSAKAGLQFPVGRVARYLKKGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGNVTIAAGGVLPNIHSVLLPKKSAEK 141
[Close]
BLAST of mRNA_P-littoralis_Contig989.13.1 vs. uniprot
Match: A0A6U2JFS4_9STRA (Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A6U2JFS4_9STRA)

HSP 1 Score: 196 bits (499), Expect = 5.810e-63
Identity = 103/122 (84.43%), Postives = 113/122 (92.62%), Query Frame = 0 
Query:    1 MSGKGNGGRG-KKSVTRSAKAGLQFPVGRVGRFLKAGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVE 121
            MSGKG GGRG KKS T SAKAGLQFPVGR+GR+L+ GKYA+R+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHI LAV+NDEELNKLLG VTIASGGVLPNIHAVLLPKK+ +
Sbjct:    1 MSGKGKGGRGGKKSTTSSAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAVLLPKKSAK 122
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig989.13.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWI9_ECTSI1.750e-7395.90Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
D7G193_ECTSI6.030e-7295.87Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5KG79_9PHAE1.670e-6789.92Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FVQ5_ECTSI8.570e-6789.92Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D8LLP0_ECTSI2.330e-6688.98Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A6H5KGY1_9PHAE3.280e-6496.67Integrase catalytic domain-containing protein n=7 ... [more]
A0A836CG77_9STRA2.540e-6383.87Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
A0A835ZLE9_9STRA2.560e-6385.12Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
A0A7S3CML3_9SPIT2.920e-6386.18Histone H2A (Fragment) n=1 Tax=Strombidium rassoul... [more]
A0A6U2JFS4_9STRA5.810e-6384.43Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 Rep... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 12..34
score: 69.69
coord: 56..69
score: 90.54
coord: 98..116
score: 76.04
coord: 41..56
score: 90.36
coord: 70..84
score: 74.98
IPR002119Histone H2ASMARTSM00414h2a4coord: 3..121
e-value: 4.2E-78
score: 275.5
IPR002119Histone H2APANTHERPTHR23430HISTONE H2Acoord: 7..120
IPR002119Histone H2ACDDcd00074H2Acoord: 13..118
e-value: 8.65747E-68
score: 197.943
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 1..122
e-value: 3.1E-63
score: 213.4
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 2..120
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 90..121
e-value: 5.1E-19
score: 67.7
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 11..87
e-value: 4.6E-15
score: 56.1
NoneNo IPR availablePIRSRPIRSR037942-1PIRSR037942-1coord: 7..119
e-value: 5.9E-53
score: 178.2
NoneNo IPR availablePANTHERPTHR23430:SF286HISTONE H2A.6coord: 7..120
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 20..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig989contigP-littoralis_Contig989:63049..63417 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig989.13.1mRNA_P-littoralis_Contig989.13.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig989 63049..63417 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig989.13.1 ID=prot_P-littoralis_Contig989.13.1|Name=mRNA_P-littoralis_Contig989.13.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=123bp
MSGKGNGGRGKKSVTRSAKAGLQFPVGRVGRFLKAGKYASRVGAGAPVYL
AAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVT
IASGGVLPNIHAVLLPKKTVEK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR009072Histone-fold
IPR032454Histone_H2A_C
IPR007125Histone_H2A/H2B/H3
IPR032458Histone_H2A_CS