prot_P-littoralis_Contig98.30.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig98.30.1
Unique Nameprot_P-littoralis_Contig98.30.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length121
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig98.30.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 10..43
e-value: 29.0
score: 10.9
coord: 44..77
e-value: 11.0
score: 14.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 2..118
e-value: 5.0E-10
score: 41.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 4..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig98contigP-littoralis_Contig98:166269..168553 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig98.30.1mRNA_P-littoralis_Contig98.30.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig98 166269..168553 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig98.30.1 ID=prot_P-littoralis_Contig98.30.1|Name=mRNA_P-littoralis_Contig98.30.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=121bp
SIEQHDSTFWPAYSLRGRLRYKAGNIPGALQDLTVCVQEAPQDRAALKTR
ARLFASRGLWEDASRDLSAGLRVDPNDTDDYSGAVYDFGIVIDRAEVPSA
TDYIRRACAFCCGQVNAITS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf