prot_P-littoralis_Contig979.8.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig979.8.1
Unique Nameprot_P-littoralis_Contig979.8.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length307
Homology
BLAST of mRNA_P-littoralis_Contig979.8.1 vs. uniprot
Match: D7G5Q8_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Q8_ECTSI)

HSP 1 Score: 458 bits (1178), Expect = 2.870e-161
Identity = 225/255 (88.24%), Postives = 238/255 (93.33%), Query Frame = 0
Query:   52 MSSRLPVAPEADAPKSLALPFLPQPEALDGTMIGDVGFDPLGLATPGNLDRYREAELKHGRLAMVALAGWPVATLLLGLLTKIVPPASVCTGNGCAIDQTLSGSALPLEAIGNVSFAYWGSALALAVAAELTAVRRRKNSNVERLRNGPDNYRAGDLGLDPFGLADDEMRLREIKHGRLAMAAFAFHYAGVLLEKKGVVVGHQLWGSVCVYNLKWGLSTLPPPICYPRPEAALDTTLSWEIMYRVLSGFFQEPYY 306
            MSSRLPV P+ DAP+S+ALPFLP+PEALDGTMIGDVGFDPLG A   NLDRYREAELKHGRLAMVALAGWPVATL LGLLTK++PPA+VCTGNGCAIDQT SGSALPLEAIGNVSF YWGSALALAVAAEL A+RR K S+V R+  GPD YRAGDLGLDPF LADDEMRLREIKHGRLAMAAFAFHYAGVLLEKKGVVVGHQLWGSVCVYNLKWG+S+LPPPICYPRPEAALDTTLSWEIMYRVLSGFF+EPYY
Sbjct:    2 MSSRLPVIPDTDAPRSVALPFLPRPEALDGTMIGDVGFDPLGFAAEDNLDRYREAELKHGRLAMVALAGWPVATLFLGLLTKLIPPATVCTGNGCAIDQTWSGSALPLEAIGNVSFVYWGSALALAVAAELVAIRR-KQSSVGRV--GPDEYRAGDLGLDPFNLADDEMRLREIKHGRLAMAAFAFHYAGVLLEKKGVVVGHQLWGSVCVYNLKWGMSSLPPPICYPRPEAALDTTLSWEIMYRVLSGFFKEPYY 253          
BLAST of mRNA_P-littoralis_Contig979.8.1 vs. uniprot
Match: A0A835ZHI1_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHI1_9STRA)

HSP 1 Score: 315 bits (806), Expect = 7.490e-105
Identity = 158/247 (63.97%), Postives = 182/247 (73.68%), Query Frame = 0
Query:   60 PEADAPKSLALPFLPQPEALDGTMIGDVGFDPLGLATPGNLDRYREAELKHGRLAMVALAGWPVATLLLGLLTKIVPPASVCTGNGCAIDQTLSGSALPLEAIGNVSFAYWGSALALAVAAELTAVRRRKNSNVERLRNGPDNYRAGDLGLDPFGLADDEMRLREIKHGRLAMAAFAFHYAGVLLEKKGVVVGHQLWGSVCVYNLKWGLSTLPPPICYPRPEAALDTTLSWEIMYRVLSGFFQEPYY 306
            P AD  KS ALPFL  P      M GD GFDPLG AT  N+DR RE ELKHGRLAMVAL GWPVA L+LGLL + VPPA+VCTG+GC +D +LS  ALPL+AIG     YW SALALA+ AE+ A++RR+         GPD    GDLG+DPF LA D+MRL+E+KHGRLAMAAFA HYAGVL + KGVV  HQ+W  VCVYN +  L   P PICYPRPEAALDT LSWEIM+RVL+G+F+EPYY
Sbjct:    5 PSADVGKSRALPFLQAPFFAGSDMTGDAGFDPLGFATEDNIDRMRECELKHGRLAMVALGGWPVAELVLGLLQRAVPPATVCTGSGCTVDSSLSAYALPLQAIGRFGAVYWASALALAIVAEVAALKRRQEW-------GPD-LPLGDLGVDPFKLASDDMRLKELKHGRLAMAAFAVHYAGVLAKNKGVVFAHQMWSQVCVYNFRADLG-FPAPICYPRPEAALDTVLSWEIMFRVLTGYFKEPYY 242          
BLAST of mRNA_P-littoralis_Contig979.8.1 vs. uniprot
Match: A0A0M0K4A5_9EUKA (Protein fucoxanthin chlorophyll a c protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K4A5_9EUKA)

HSP 1 Score: 201 bits (511), Expect = 2.830e-60
Identity = 118/244 (48.36%), Postives = 150/244 (61.48%), Query Frame = 0
Query:   66 KSLALPFLPQPEALDGTMIGDVGFDPLGLATPGNLDRYREAELKHGRLAMVALAGWPVATLLLGLLTKIVPPASVCTGNGCAIDQTLSG--SALPLEAIGNVSFAYWGSALALAVAAELTAVRRRKNSNVERLRNGPDNYRAGDLGLDPFGLADDEMRLREIKHGRLAMAAFAFHYAGVLLEKKGVVVGHQLWGSVCVYNLKWGLSTLPPPICYPR-PEAALDTTLSWEIMYRVLSGFFQEPYY 306
            +S+++PFLP+P ALDGTMIGDVGFDPLG+AT  NL R REAEL+HGRLAMVA  GWP+A     L  K+VP ++VCTG GC +D+T  G  +AL L  IG VS AYWGS LALAV  EL A   R+    + LR          L +D        ++L E+KHGRLAM A A +++  LL           WG  CVY+L          +CYP+    A D  LSWEI++R L+G+F+EPY+
Sbjct:   22 RSISVPFLPRPAALDGTMIGDVGFDPLGIATTANLARMREAELRHGRLAMVATWGWPIAEGGFALAQKLVPVSTVCTGVGCYVDKTDEGRQAALQLADIGQVSIAYWGSLLALAVHGELRA---RQGCYFDPLR----------LYVDADDTERVRLQLAELKHGRLAMCAVATYWSTKLL-----------WGETCVYSLT---RQSAQALCYPQYTNEAFDYVLSWEILFRTLTGYFREPYF 238          
BLAST of mRNA_P-littoralis_Contig979.8.1 vs. uniprot
Match: A0A7S0L6L5_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L6L5_9EUKA)

HSP 1 Score: 193 bits (490), Expect = 8.940e-57
Identity = 123/280 (43.93%), Postives = 153/280 (54.64%), Query Frame = 0
Query:   51 AMSSRLPVAPEADAPKSLALPFLPQPEALDGTMIGDVGFDPLGLATPGNLDRYREAELKHGRLAMVALAGWPVATLLLGLLTKIVPPASVCTGNGCAIDQTLSG--SALPLEAIGNVSFAYWGSALALAVAAELTAVRRRKNSNVERLRNGPDNYRAGDLGLDPFGL---AD----DEMRLREIKHGRLAMAAFAFHYAGVL--------------LEKKGVVVGHQLWGSVCVYNLKWGLSTLPPPICYPR-PEAALDTTLSWEIMYRVLSGFFQEPYY 306
            A  + LP AP     +SLALPF+P P +LDG+++GD GFDPLGLAT  +L R R AEL+H RLAMVA  GWP+A     +  K+VP  SVCTG GC +D T     +AL L  IG +S  YWG  LA A+A EL A          R   G     +G    DP  L   AD    + + L EIKHGRLAM A A H+A  L              + K  +   HQLW   CVY+L     T    ICYP+      D  LSWEIM+RV++G+F+EPY+
Sbjct:    9 ACGALLPNAPR----QSLALPFIPAPLSLDGSLVGDAGFDPLGLATVESLPRLRAAELRHARLAMVATWGWPIAESGFWIAQKLVPVKSVCTGGGCYVDSTEGARQAALQLADIGVISVGYWGLLLAAAIAGELRA----------RSLEG-----SGQPAFDPLSLWTAADAPEQERLELAEIKHGRLAMVAIAAHWATKLGAACGSAAAAAAAGVPKGTLTFAHQLWSQTCVYSL-----TKQTTICYPQFTNDQFDFILSWEIMFRVVTGYFREPYF 264          
BLAST of mRNA_P-littoralis_Contig979.8.1 vs. uniprot
Match: R1D3G8_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D3G8_EMIHU)

HSP 1 Score: 174 bits (440), Expect = 6.890e-50
Identity = 106/254 (41.73%), Postives = 144/254 (56.69%), Query Frame = 0
Query:   56 LPVAPEADAPKSLALPFLPQPEALDGTMIGDVGFDPLGLATPGNLDRYREAELKHGRLAMVALAGWPVATLLLGLLTKIVPPASVCTGNGCAIDQTLSG--SALPLEAIGNVSFAYWGSALALAVAAELTAVRRRKNSNVERLRNGPDNYRAGDLGLDPFGLADDEMRLREIKHGRLAMAAFAFHYAGVLLEKKGVVVGHQLWGSVCVYNLKWGLSTLPPPICYPRPEAA-LDTTLSWEIMYRVLSGFFQEPYY 306
            +P +P    P+S+A+P L  P      MIGD+GFDPLGLAT  NL R REAE++HGRLAMVA  GWPVA +   +  +++P +SVC+G+GC +D+T +G  +AL L  IG +S  YWG+ LA A                   R G           DP  L    + L E+KHGRLAMAA A H+A  L   +G        G  CVY+    L ++   +C P+  AA  D  LS+EI++RVL+G+F+EPY+
Sbjct:    2 VPTSPST--PRSVAIPLLQSP------MIGDLGFDPLGLATADNLQRMREAEVRHGRLAMVAAWGWPVAEVGFAVAQRLLPVSSVCSGDGCGVDRTEAGRQAALQLSDIGLISACYWGALLAAAA------------------RRG--------CAFDPLRL---RLELAELKHGRLAMAAVALHWATKLAGARGSAAAALAAGETCVYSAAESLRSVQG-VCMPQWTAAPFDAVLSYEILFRVLTGYFREPYF 217          
BLAST of mRNA_P-littoralis_Contig979.8.1 vs. uniprot
Match: R1CT78_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CT78_EMIHU)

HSP 1 Score: 124 bits (311), Expect = 1.190e-31
Identity = 68/133 (51.13%), Postives = 90/133 (67.67%), Query Frame = 0
Query:   57 PVAPEADAPKSLALPFLPQPEALDGTMIGDVGFDPLGLATPGNLDRYREAELKHGRLAMVALAGWPVATLLLGLLTKIVPPASVCTGNGCAIDQTLSG--SALPLEAIGNVSFAYWGSALALAVAAELTAVRR 187
            P++P    P+S+A+P L  P      MIGD+GFDPLGLAT  NL R REAE++HGRLAMVA  GWPVA +   +  +++P +SVC+G+GC +D+T +G  +AL L  IG +S  YWG+ LA AV  EL A  R
Sbjct:   14 PMSPST--PRSVAIPLLQSP------MIGDLGFDPLGLATADNLQRMREAEVRHGRLAMVAAWGWPVAEVGFAVAQRLLPVSSVCSGDGCGVDRTEAGRQAALQLSDIGLISACYWGTLLAAAVTGELQAPHR 138          
BLAST of mRNA_P-littoralis_Contig979.8.1 vs. uniprot
Match: B7G4U8_PHATC (Protein fucoxanthin chlorophyll a/c protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G4U8_PHATC)

HSP 1 Score: 122 bits (305), Expect = 2.330e-29
Identity = 80/198 (40.40%), Postives = 112/198 (56.57%), Query Frame = 0
Query:   60 PEADAPKSLALPFLPQPEALDGTMIGDVGFDPLGLA-TPGNLDRYREAELKHGRLAMVALAGWPVATLLLGLLTKIVPPASVCTGNGCAIDQTLSGSALPLEAIGNVSFAYWGSALALAVAAELTAVRRRKNSNVERLRNGPDNYRAGDLGLDPFGL------ADDEMRLREIKHGRLAMAAFAFHYAGVLLEKKGVV 250
            P A    S +LPF+ +P ALDGT++GDVGFDPLG A T  +L  YREAE+KH RLAM+A AGWP++ L    +   +    +   N  A    L+G       +G VS  YW + L  A A ++  + + +       +N PD Y  G+LG+DPFGL      A ++M+L+E+K+GRLAM A +       + K GVV
Sbjct:   53 PPALPKMSQSLPFMERPAALDGTLVGDVGFDPLGFAKTKADLINYREAEVKHARLAMLAAAGWPLSELFDAKIANWMGMTPLLDANDRA-PSLLNGG------LGKVSPVYWVACLVAAAAIDVYGISKAR-------KNEPD-YFPGNLGIDPFGLFPKDAAAQEDMKLKELKNGRLAMIAISAFAFQEFVSKFGVV 235          
BLAST of mRNA_P-littoralis_Contig979.8.1 vs. uniprot
Match: A0A7S3PZK5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZK5_9STRA)

HSP 1 Score: 118 bits (295), Expect = 4.700e-28
Identity = 80/194 (41.24%), Postives = 109/194 (56.19%), Query Frame = 0
Query:   63 DAPKSLALPFLPQPEALDGTMIGDVGFDPLGLA-TPGNLDRYREAELKHGRLAMVALAGWPVATLLLGLLTKIVPPASVCTGNGCAIDQTLSGSALPLEAIGNVSFAYWGSALALAVAAELTAVRRRKNSNVERLRNGPDNYRAGDLGLDPFGLADDE------MRLREIKHGRLAMAAFAFHYAGVLLEKKGV 249
            ++ +S ++PFL +PE LDG++ GDVGFDPLG A T   L  +REAE+KH RLAM+A AGWP++ LL      ++  A        A+D   +GSALP  A  N+S  +W  ALA A   +L         + + L N PD Y  G+LG DP  L   +      M+L EIKHGR AM A AF++    + K  +
Sbjct:   65 ESSQSKSIPFLEKPEFLDGSIAGDVGFDPLGFAKTEKRLQIFREAEVKHARLAMLAAAGWPLSELLNNKFADVLNLAP-------ALDS--AGSALPFNA--NISDNFWIGALAFASVVDLYG-------SYKALENEPD-YFPGNLGFDPLSLYPKDPMEQKAMQLAEIKHGRTAMVAVAFYFIEEYMTKSNL 239          
BLAST of mRNA_P-littoralis_Contig979.8.1 vs. uniprot
Match: A0A7S4JV13_9STRA (Hypothetical protein n=4 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JV13_9STRA)

HSP 1 Score: 115 bits (287), Expect = 1.160e-26
Identity = 79/202 (39.11%), Postives = 109/202 (53.96%), Query Frame = 0
Query:   56 LPVAPEADAPKSLALPFLPQPEALDGTMIGDVGFDPLGLA-TPGNLDRYREAELKHGRLAMVALAGWPVATLLLGLLTKIVPPASVCTGNGCAIDQTLSGSALPLEAIGNVSFAYWGSALALAVAAELTAVRRRKNSNVERLRNGPDNYRAGDLGLDPFGL------ADDEMRLREIKHGRLAMAAFAFHYAGVLLEKKGVV 250
            +PVAP      S ++PF+ +P AL G + GDVGFDPLG A +  +L  YREAE+KH RLAM+A AGWP++ +      KI    ++      A+D      +L    +G VS  YW + L LA A +   +++ K +N       PD Y  G+LG DPFG+        + M+L EIK+GRLAM A         + K GVV
Sbjct:   57 VPVAPPPLPTMSQSMPFMERPAALTGAIAGDVGFDPLGFAKSESDLMNYREAEVKHARLAMLAAAGWPLSEVF---DRKIATALNLAP----AVDANDRAPSLLNGGLGKVSPLYWVACLGLAAAVDFYGIQKSKENN-------PD-YFPGNLGFDPFGVYPKDKDGQERMQLAEIKNGRLAMIAIFAFAVQEAVSKVGVV 243          
BLAST of mRNA_P-littoralis_Contig979.8.1 vs. uniprot
Match: A0A7S3Q9Z2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q9Z2_9STRA)

HSP 1 Score: 113 bits (282), Expect = 3.590e-26
Identity = 93/248 (37.50%), Postives = 121/248 (48.79%), Query Frame = 0
Query:    6 ILFSSACIMGVSAFLPTSVPPLAESSKPGVSGGGSVNRQQRVRPLAMSSRLPVAPEADA------PKSLALPFLPQPEALDGTMIGDVGFDPLGLA-TPGNLDRYREAELKHGRLAMVALAGWPVATLLLGLLTKIVPPASVCTGNGCAIDQTLSGSALPLEAIGNVSFAYWGSALALAVAAELTAVRRRKNSNVERLRNGPDNYRAGDLGLDPFGLADDE--------MRLREIKHGRLAMAAFAFH 238
            IL SSAC     AF+PTS  PL+ +S        S+     V  L +   +P    A+        +S A+PF+ +P+ LDG+M GDVGFDPLGLA +P  L  +REAE+KH RLAM+A AGWP++ LL   +      A      G A    LS          +   +YW   LA A   ++             L N  D Y  G+LG DP G   D+        M+L EIKHGR AM AFAF+
Sbjct:   10 ILASSAC-----AFVPTSNGPLSSTS--------SLRLSDEV--LEVLEEIPNGDPANLNELFRKTQSKAIPFMERPDLLDGSMAGDVGFDPLGLAKSPKMLRMFREAEVKHARLAMLAAAGWPLSELLDKKIAGFFNLAPALDAAGRATPSALS----------HTIDSYWIGVLAFAAIVDIYGT-------YVALDNDED-YFPGNLGFDPMGFYPDDSDPKGQKAMQLAEIKHGRTAMMAFAFY 224          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig979.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5Q8_ECTSI2.870e-16188.24Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A835ZHI1_9STRA7.490e-10563.97Light harvesting complex protein n=1 Tax=Tribonema... [more]
A0A0M0K4A5_9EUKA2.830e-6048.36Protein fucoxanthin chlorophyll a c protein n=1 Ta... [more]
A0A7S0L6L5_9EUKA8.940e-5743.93Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
R1D3G8_EMIHU6.890e-5041.73Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
R1CT78_EMIHU1.190e-3151.13Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
B7G4U8_PHATC2.330e-2940.40Protein fucoxanthin chlorophyll a/c protein n=2 Ta... [more]
A0A7S3PZK5_9STRA4.700e-2841.24Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S4JV13_9STRA1.160e-2639.11Hypothetical protein n=4 Tax=Odontella aurita TaxI... [more]
A0A7S3Q9Z2_9STRA3.590e-2637.50Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 76..237
e-value: 2.1E-29
score: 103.1
NoneNo IPR availableGENE3D1.10.3460.10Chlorophyll a/b binding protein domaincoord: 65..261
e-value: 8.9E-38
score: 132.1
NoneNo IPR availablePANTHERPTHR21649:SF125CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTICcoord: 63..248
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 62..250
IPR001344Chlorophyll A-B binding protein, plant and chromistaPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 63..248

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig979contigP-littoralis_Contig979:42211..49729 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig979.8.1mRNA_P-littoralis_Contig979.8.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig979 40205..49954 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig979.8.1 ID=prot_P-littoralis_Contig979.8.1|Name=mRNA_P-littoralis_Contig979.8.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=307bp
MRVLFILFSSACIMGVSAFLPTSVPPLAESSKPGVSGGGSVNRQQRVRPL
AMSSRLPVAPEADAPKSLALPFLPQPEALDGTMIGDVGFDPLGLATPGNL
DRYREAELKHGRLAMVALAGWPVATLLLGLLTKIVPPASVCTGNGCAIDQ
TLSGSALPLEAIGNVSFAYWGSALALAVAAELTAVRRRKNSNVERLRNGP
DNYRAGDLGLDPFGLADDEMRLREIKHGRLAMAAFAFHYAGVLLEKKGVV
VGHQLWGSVCVYNLKWGLSTLPPPICYPRPEAALDTTLSWEIMYRVLSGF
FQEPYY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022796Chloroa_b-bind
IPR001344Chloro_AB-bd_pln