prot_P-littoralis_Contig97.24.6 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig97.24.6
Unique Nameprot_P-littoralis_Contig97.24.6
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length759
Homology
BLAST of mRNA_P-littoralis_Contig97.24.6 vs. uniprot
Match: D7FWX1_ECTSI (RNA-binding protein SiahBP n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWX1_ECTSI)

HSP 1 Score: 646 bits (1667), Expect = 1.730e-221
Identity = 404/568 (71.13%), Postives = 432/568 (76.06%), Query Frame = 0
Query:  197 WDTPSAAPAAGGAVKRGWGDAPKPVVAPVVPAMTP--LQELQRKLAEEQVAAAMGQAPSVTSVAAGAAAMGLTMGGMLPGAGAGGMPQNAPVVQRPNPRRLYIGSLHYELKESDITAIFANFGPLKLVDMSHDKTTGRHKGFCFIEYADVRGADAALRAMNGFELAGRAIKVGRPYNTESGISGGIDGMGLPAAMQLPGMAAFMAQRSTAAAVPGAPGSGVAAEQLKAAM-MNAAPAQTKIYVGNVEPHITTEMIKTVFEPFGMVVGAEMVVDPNNPGHHKGFGFVQYAQETVARTVIDTMSNFELAGRTLRVAWAQDQSKPALSVLPPGLTAAGAAXXXXXXXXXXXXXXXXXXXXXXXXXRLTA-SRLQGFGGGGGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVWVSGGSAG--SGGAAAQQAQAIAXXXXXRARMSAAAGVPRVSRCVCLVNMLGPEDADDQETKAEILEEFGTCGTVLQLHVHKQRASGGTVVAVRVFVVYADPNGAALAIRKMHGRFFAGRQVQAVAYDEGLFSQGSLDS 758
            WDTP+A    G  VK+GWGDAP     PV P      LQELQRKLAEEQVAAAMGQAP VTSV+AGAAA+GLTMG  +   GAG   Q AP  Q  NPRR+Y+GSLHYELKESDIT+IFANFG LKLVDMSHD +TGRHKGFCFIEY DV+ ADAALRAMNGFELAGRAIKVGRP NT+SG++GGI+GMGLPAAMQLPGMAAFMAQ ST+AA  GA GSGVAAEQLKAAM M  APAQTKIYVGNVEPHITTEMIKTVFEPFGMVVGAEMV DP+NPG+HKGFGF+QYAQE+VARTVIDTMS+FELAGRTLRVAWAQDQSKPALSVLPPGL+AAGAAXXXXXXXXXXXXXXXXXXXXXXXXXRLTA SRLQG G GG A                                                 V V GGSAG   GG                  +  A GVP VSRC+CLVNMLGPEDADD++TKAEILEEFGTCGTVLQLHVHKQR S G V AVRVFVV++DPN    AIRKMHGRFFAGRQVQA AYD G+FSQG LDS
Sbjct:  198 WDTPAAP---GAVVKKGWGDAP-----PVAPXXXXXXLQELQRKLAEEQVAAAMGQAPPVTSVSAGAAALGLTMGAAMQAPGAGTRTQTAP-AQPSNPRRIYVGSLHYELKESDITSIFANFGALKLVDMSHDSSTGRHKGFCFIEYVDVKSADAALRAMNGFELAGRAIKVGRPLNTDSGVAGGIEGMGLPAAMQLPGMAAFMAQHSTSAAG-GAQGSGVAAEQLKAAMGMTTAPAQTKIYVGNVEPHITTEMIKTVFEPFGMVVGAEMVQDPSNPGNHKGFGFIQYAQESVARTVIDTMSSFELAGRTLRVAWAQDQSKPALSVLPPGLSAAGAAXXXXXXXXXXXXXXXXXXXXXXXXXRLTAASRLQGLGNGGVANNGSNGG------------------------------------------VGVVGGSAGRMQGGG-----------------VGGATGVPGVSRCMCLVNMLGPEDADDEDTKAEILEEFGTCGTVLQLHVHKQRGSDGAVWAVRVFVVFSDPNETVTAIRKMHGRFFAGRQVQAAAYDHGMFSQGLLDS 696          
BLAST of mRNA_P-littoralis_Contig97.24.6 vs. uniprot
Match: A0A836CC18_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC18_9STRA)

HSP 1 Score: 194 bits (493), Expect = 1.630e-50
Identity = 118/253 (46.64%), Postives = 149/253 (58.89%), Query Frame = 0
Query:  294 RLYIGSLHYELKESDITAIFANFGPLKLVDMSHDKTTGRHKGFCFIEYADVRGADAALRAMNGFELAGRAIKVGRPYNTESGISGGIDGMGLPAAMQLPGMAAFMAQRSTAAAVPGAPGSGVAAEQ-----LKAAMMNAAP--------AQTKIYVGNVEPHITTEMIKTVFEPFGMVVGAEMVVDPNNPGHHKGFGFVQYAQETVARTVIDTMSNFELAGRTLRVAWAQDQSK---PALSVLPPGLTAAGAA 530
            R+YIGSL+YEL+ESDI AIF  FG ++ VDMS D  TG+HKGFCFIEY +   A+AAL +MNGFELAGR IKVGRP NT S  + G       A M +PGM                   G+         L+AA+   AP         QTK++VGNV+  I  + IK +F PFG V+  E+V DP NPG H+G+GF+Q+  E +A + +  M  FELAGR LRV+WA  Q K   PA +  P  + AA AA
Sbjct:  120 RIYIGSLYYELQESDILAIFGAFGQIRAVDMSKDPATGKHKGFCFIEYMEPASAEAALNSMNGFELAGRPIKVGRP-NTGSTATPG-------AGMAMPGMTXXXXXXXXXXXXXXXXXXGMGVSPSIEAALQAALTPPAPQQPQVQLVGQTKLFVGNVDLSIPADAIKQIFSPFGQVLTCELVADPENPGKHRGYGFIQFTSEPIASSAMQAMEGFELAGRPLRVSWATSQPKSTAPAGTGQPIDIQAALAA 364          
BLAST of mRNA_P-littoralis_Contig97.24.6 vs. uniprot
Match: A0A7S4PQL3_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PQL3_GUITH)

HSP 1 Score: 161 bits (407), Expect = 7.720e-39
Identity = 95/250 (38.00%), Postives = 145/250 (58.00%), Query Frame = 0
Query:  286 VVQRPNPRRLYIGSLHYELKESDITAIFANFGPLKLVDMSHDKTTGRHKGFCFIEYADVRGADAALRAMNGFELAGRAIKVGRPYNTESGISG------------------------GIDGMGLPAAMQLPGMAAFMAQRSTAAAVPGAPGSGVAAEQLKAAMMNAAPA--QTKIYVGNVEPHITTEMIKTVFEPFGMVVGAEMVVDPNNPGHHKGFGFVQYAQETVARTVIDTMSNFELAGRTLRVAWA 509
            +V+ P   RLY+GSLH++LKE+D+ AIF  FGP+K ++MS++ TTG+ KG+ FIEY +   ADA  +AM+GF +AGR IKVGRP+NT S  +                         G+ G+ LP    +PG+A     +  AA++  A  + +AA++ +A  +N   A    +IY+G+V   +    +K +F+ FG +    M+ +P N G HKG+GF++Y +   A   I  M+ F+LAGR L+V WA
Sbjct:   79 MVKPPQRNRLYVGSLHFDLKEADVRAIFQPFGPIKTIEMSYEPTTGKSKGYAFIEYMNDAQADACEKAMDGFMIAGRPIKVGRPHNTVSANAPVTILPPQLLVSRPPAMAPLAAAGLGVPGL-LPGMAGIPGLAGQHLLQQRAASLLAAQQAALAAQKAQAQPLNTPVAGPPARIYIGSVLFDVKESEVKQIFQVFGSIKQISMIPNPEN-GKHKGYGFIEYEKHDDAVQAIQAMNGFQLAGRPLKVGWA 326          
BLAST of mRNA_P-littoralis_Contig97.24.6 vs. uniprot
Match: A0A7S2AH99_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AH99_9STRA)

HSP 1 Score: 153 bits (387), Expect = 5.920e-36
Identity = 164/492 (33.33%), Postives = 212/492 (43.09%), Query Frame = 0
Query:  294 RLYIGSLHYELKESDITAIFANFGPLKLVDMSHDKTTGRHKGFCFIEYADVRGADAALRAMNGFELAGRAIKVGRPYNTESGISGGIDGMGLPAAMQLPGMAAFMAQRSTA-----AAVPGAPGSGVAAEQLKAAMMNAAPA----------------QTKIYVGNVEPHITTEMIKTVFEPFGMVVGAEMVVDPNNPGHHKGFGFVQYAQETVARTVIDTMSNFELAGRTLRVAWA--------QDQSKPALSVLPPGLTAAGAAXXXXXXXXXXXXXXXXXXXXXXXXXRLTASRLQGFGGGGGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVWVSGGSAGSGGAAAQQAQAIAXXXXXRARMSAAAGVPRVSRCVCLVNMLGPEDADDQETKAEILEEFGTCGTVLQLHVHKQRASGGTVVAVRVFVVYADPNGAALAIRKMHGRFFAGRQVQAVAYDEGLFSQGSL 756
            R+Y+GSLHY+L E DI  +F  FG +  V MS++  TG+ KG+CFIEY +   A+ AL+AMNGFELAGR IKVG+P         G  G    A     G A     R+TA     A V  A G    A      M  A+                  + +IYVGN+   I  E ++TVFEPFG +   +++ DP     H+G+GF+QY     A   +  M++FEL GR L+V WA        Q Q   + +VL P + A   +                         +L A R          G  XXXXXXXXXX             XXXXXXXXXXXXXXXX                                             ++ RCV L NM+  E+A D E   EI EE    G V  + VH     G     V +F++Y   + AA A   +H R+F GR + A  YD G F  G  
Sbjct:  112 RIYVGSLHYDLAEHDIRGVFEAFGKITEVTMSYEPATGKSKGYCFIEYENPNSANQALQAMNGFELAGRQIKVGKPDGAPGAGMMGASGSLSFATPTNSGPAIQAVDRNTAMLQAHALVQAALGKAQPATNALTLMDKASTGTDTAAAGVVANQSSDTRNRIYVGNISTDIGPEALQTVFEPFGRITDVQILPDPAGVAKHRGYGFIQYETNRAAIEAVSQMNDFELLGRRLKVNWANSATTTLNQSQVSASTAVLTPQMLAFQQSTVAQ---------------------QLAALRTA-------TGNTXXXXXXXXXXPSLPDQDSSPAVSXXXXXXXXXXXXXXXXDQ-------------------------------------------QLPRCVLLKNMVSEEEAADSELAGEIEEEGTKYGKVESVKVHMAEKQG-----VLIFLLYEAASSAARAQSTLHRRYFGGRIISAELYDHGKFIAGDF 527          
BLAST of mRNA_P-littoralis_Contig97.24.6 vs. uniprot
Match: L8GZG0_ACACA (RNA recognition motif domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GZG0_ACACA)

HSP 1 Score: 153 bits (386), Expect = 4.460e-35
Identity = 161/481 (33.47%), Postives = 230/481 (47.82%), Query Frame = 0
Query:  294 RLYIGSLHYELKESDITAIFANFGPLKLVDMSHDKTTGRHKGFCFIEYADVRGADAALRAMNGFELAGRAIKVGRPYNTESGISGG-------IDGMG--------LPA---AMQLPGMAAFMAQRSTAAAVPGA-PGSGVAAEQLKAAMMNAAPA--QTKIYVGNVEPHITTEMIKTVFEPFGMVVGAEMVVDPNNPGHHKGFGFVQYAQETVARTVIDTMSNFELAGRTLRVAWAQDQSKPALSVLPPGLTAAGAAXXXXXXXXXXXXXXXXXXXXXXXXXRLTASRLQGFGGGGGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVWVSGGSAGSGGAAAQQAQAIAXXXXXRARMSAAAGVPRVSRCVCLVNMLGPEDADDQETKAEILEEFGTCGTVLQLHVHKQRASG--GTVVAVRVFVVYADPNGAALAIRKMHGRFFAGRQVQAVAYDEGLF 751
            R+Y+GSL++EL E DI   F+ FGP+K V ++ D  T R KGF F+EYA    A AAL+ MNGF LAGR +KVGRP+   +G+ G        + G+         LP    ++ L   AA  AQ++ AAA  G+ P   +  E  K     AA A    +IYVG++   +T++ IKTVFE FG V    ++ +P   G HKG+GFV+Y +   A   I  M+ ++L GR ++V  A   +        P L   GA                           L +  L GF   G +G        XXXXXXXXXXXXXXXX                                    +   Q  A+       AR +   G  + SRCV L +M GPED DD E + EI +E    G V ++ ++++R S   G V+ +++F+++   + A  A+  ++GR+F GRQ++A  YDE  F
Sbjct:  252 RIYVGSLNFELSEEDIKTAFSPFGPVKSVSLTKDPLTQRSKGFAFVEYAYPDAATAALKHMNGFMLAGRQLKVGRPHTPGAGLPGXXXXXXVMMPGLSPFPQLNPSLPVMNPSILLQANAAIEAQKAAAAAANGSQPTPEMMQEFTKLTGKTAADATASNRIYVGSIHWDLTSDDIKTVFEAFGTVKSCVLMPNPET-GKHKGYGFVEYEESKSAEEAIQQMNGWDLGGRPIKVGRAISSA--------PILPTPGAGLLNPSG--------------------LPSPMLGGFPMPGMSGMPGLLPGMXXXXXXXXXXXXXXXXLSSASAIAQAIANKKVEESLSHEENLTL--------STPNQRYALMQKL---ARGTITGG--KSSRCVVLKDMAGPEDVDD-ELEGEITDEATKYGIVERVVIYQERQSEKPGDVI-IKIFILFQSADQAQKALTSLNGRWFGGRQIKAAFYDEKKF 688          
BLAST of mRNA_P-littoralis_Contig97.24.6 vs. uniprot
Match: L1JR44_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JR44_GUITC)

HSP 1 Score: 148 bits (374), Expect = 1.020e-34
Identity = 89/228 (39.04%), Postives = 135/228 (59.21%), Query Frame = 0
Query:  284 APVVQRPNPRRLYIGSLHYELKESDITAIFANFGPLKLVDMSHDKTTGRHKGFCFIEYADVRGADAALRAMNGFELAGRAIKVGRPYNTESGISGGIDGMGLPAAMQLPGMAAFMAQRSTAAAVPGAPG----SGVAAEQLKAAMMNAAPA--QTKIYVGNVEPHITTEMIKTVFEPFGMVVGAEMVVDPNNPGHHKGFGFVQYAQETVARTVIDTMSNFELAGRTLR 505
            A +V+ P   RLY+GSLH++LKE+D+ AIF  FGP+K ++MS++ TTG+ KG+ FIEY +   ADA  +AM+GF +AGR IKVGRP+NT S  +        P   +L     F+   S+    P  P     + +AA++ +A  +N   A    +IY+G+V   +    +K +F+ FG +    M+ +P N G HKG+GF++Y +   A   I  M+ F+LAGR L+
Sbjct:   89 AGMVKPPQRNRLYVGSLHFDLKEADVRAIFQPFGPIKTIEMSYEPTTGKSKGYAFIEYMNDAQADACEKAMDGFMIAGRPIKVGRPHNTVSANA--------PVHRRL----FFLLNFSSVDLQPWPPSLPQQAALAAQKAQAQPLNTPVAGPPARIYIGSVLFDVKESEVKQIFQVFGSIKQISMIPNPEN-GKHKGYGFIEYEKHDDAVQAIQAMNGFQLAGRPLK 303          
BLAST of mRNA_P-littoralis_Contig97.24.6 vs. uniprot
Match: A0A0U9HK97_KLENI (Putative RNA recognition motif containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HK97_KLENI)

HSP 1 Score: 147 bits (370), Expect = 5.840e-34
Identity = 92/244 (37.70%), Postives = 129/244 (52.87%), Query Frame = 0
Query:  294 RLYIGSLHYELKESDITAIFANFGPLKLVDMSHDKTTGRHKGFCFIEYADVRGADAALRAMNGFELAGRAIKVGRPYNTESGISGGIDGMGLPAAMQLPGMAAF-------------------------MAQRSTAAAVPGAPGSGVAAEQLKAA---MMNAAPAQTKIYVGNVEPHITTEMIKTVFEPFGMVVGAEMVVDPNNPGHHKGFGFVQYAQETVARTVIDTMSNFELAGRTLRVAWA 509
            R+Y+GS++YEL ESDI   F+ FG +  +DM  D  T +HKGFCFIE+     A+ AL  MN F LAGR +KVGRP+N  +G+ GGI     P   Q    AAF                         +AQ+  A   P     G+      AA   ++N +    +IYVG++   I+ E IK VF+ FG V    ++ +P   G HKG+GF+++ Q   A+  ID+M+ F+L GR L+V WA
Sbjct:   89 RIYVGSIYYELNESDIILAFSAFGSIHKIDMPRDAATAKHKGFCFIEFHSSEAAENALNTMNEFVLAGRKLKVGRPHNI-AGMPGGIVVSTTPPTPQA--QAAFKQAQQQAQAISAQLSLRQQQQXXLLIAQQQQALENPHLVAQGLLPPPNPAAIQALLNPSRPDARIYVGSIYYEISEEDIKAVFQAFGQVKSCNLIPNPET-GKHKGYGFIEFEQPEAAKAAIDSMNGFDLGGRQLKVGWA 328          
BLAST of mRNA_P-littoralis_Contig97.24.6 vs. uniprot
Match: W7U4B1_9STRA (PolyU-binding-splicing factor PUF60 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U4B1_9STRA)

HSP 1 Score: 145 bits (366), Expect = 3.490e-33
Identity = 81/218 (37.16%), Postives = 122/218 (55.96%), Query Frame = 0
Query:  294 RLYIGSLHYELKESDITAIFANFGPLKLVDMSHDKTTGRHKGFCFIEYADVRGADAALRAMNGFELAGRAIKVGRPYNTESGISGGIDGMGLPAAMQLPGMAAFMAQRSTAAAVPGAPGSGVAAEQLKAAMMNAAPAQTKIYVGNVEPHITTEMIKTVFEPFGMVVGAEMVVDPN-NPGH-HKGFGFVQYAQETVARTVIDTMSNFELAGRTLRVAWA 509
            R+Y+GSLHY+LKE DI  +FA FG ++ ++MS +  TGR KGF F+++     A  AL+ MNGF+LAGR +KVGRP    SG              Q             +A   G PG+G  A+++      A     ++YVG++   ++ E+++ +F+ FG +    ++ DP  NPG  H+G+GF+++  E  A T I TM  FEL GR ++V WA
Sbjct:  215 RIYVGSLHYDLKEDDIRKVFAPFGAIRSINMSFEPGTGRSKGFAFVDFEQAESATMALQTMNGFQLAGRTLKVGRPTPGGSGXXXXXXXXXXXXXXQ-------------SAVYGGLPGAGFGAQRVGGGGGGA-----RVYVGSIPFEVSEEVVRGLFQSFGKIRSFSLLPDPQMNPGRLHRGYGFIEFDSEQAAATAIQTMQGFELQGRAMKVGWA 414          
BLAST of mRNA_P-littoralis_Contig97.24.6 vs. uniprot
Match: A0A5D6XHU0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHU0_9STRA)

HSP 1 Score: 141 bits (356), Expect = 2.640e-31
Identity = 129/456 (28.29%), Postives = 186/456 (40.79%), Query Frame = 0
Query:  293 RRLYIGSLHYELKESDITAIFANFGPLKLVDMSHDKTTGRHKGFCFIEYADVRGADAALRAMNGFELAGRAIKVGRPYNTESGISGGIDGMGLPAAMQLPGMAAFMAQRSTAAAVPGAPGSGVAAEQLKAAMMNAAPAQTK-IYVGNVEPHITTEMIKTVFEPFGMVVGAEMV-VDPNNPGHHKGFGFVQYAQETVARTVIDTMSNFELAGRTLRVAWAQDQSKPALSVLPPGLTAAGAAXXXXXXXXXXXXXXXXXXXXXXXXXRLTASRLQGFGGGGGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVWVSGGSAGSGGAAAQQAQAIAXXXXXRARMSAAAGVPRVSRCVCLVNMLGPEDADDQETKAEILEEFGTCGTVLQLHVHKQRASGGTVVAVRVFVVYADPNGAALAIRKMHGRFFAGRQVQAVAY 746
            RRLYIG+L+Y+LKE DI   FA FG +K +D+S +    R KGFCF+E+ DV  A+ A++ +NG +LA R I+VGRP+   S  + G   +G  A   LP                                       TK IYVGNV   + +  ++++F PFG++    M  + P     H+G+GF+++ +E+ A+  I  M+ FELAG+ LRV  A               +AA  A                           T+S     G  G  G                                                         S G A ++ +A         +  A  G  R  RC+CL+N++G  + DD E + E+ EE G  G V  + +H+  A       VRVFV++ D   A  A + +HGRFF G QVQA  Y
Sbjct:  368 RRLYIGNLYYDLKEDDIRNTFAPFGQIKSIDLSLEPGHNRSKGFCFLEFEDVLAAETAVQLLNGSQLANRTIRVGRPHRGSS--NPGDTSIGQQAIKDLP---------------------------------------TKCIYVGNVRVELNSHHLESIFSPFGVIRTCVMAALAPLESNAHRGYGFLEFTEESAAQNAIQHMNGFELAGQNLRVGKA---------------SAAAIAINL-----------------------ATSSDRVVRGENGELGA--------------------------------------------------------SAGLAPKKGRAFDDDDVEGVKDVAEPG--REKRCLCLLNLVGNGEVDD-ELEGEVREECGRFGAVETVAIHEMEAH------VRVFVLFEDEPSALKAKQALHGRFFGGNQVQAHFY 679          
BLAST of mRNA_P-littoralis_Contig97.24.6 vs. uniprot
Match: A0A7S1H1Q7_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H1Q7_HEMAN)

HSP 1 Score: 133 bits (334), Expect = 3.380e-31
Identity = 82/209 (39.23%), Postives = 112/209 (53.59%), Query Frame = 0
Query:  294 RLYIGSLHYELKESDITAIFANFGPLKLVDMSHDKTTGRHKGFCFIEYADVRGADAALRAMNGFELAGRAIKVGRPYNTESGISGGIDGMGLPAAMQLPGMAAFMAQRSTAAAVPGAPGSGVAAEQLKAAMMNAAPAQTKIYVGNVEPHITTEMIKTVFEPFGMVVGAEMVVDPNNPGHHKGFGFVQYAQETVARTVIDTMSNFELAGR 502
            RLY+GSL+Y++K++D+  IFA FGP+K +DMS++  TG+ KGF F+E+ D   A+A   AMNGF L GRAIK+GRP++T        +  G      +  MA   A R       G P                    T+IYVG+V   I    +K VF  FG V    M+ +P   G HKG+GFV + +   A   I TM+ F+LAGR
Sbjct:   76 RLYVGSLNYDIKDTDLRPIFAPFGPIKCIDMSYEPATGKSKGFGFVEFYDGLHAEACQMAMNGFNLGGRAIKIGRPHHTGPQSR---EASGEEKRPYIMPMALQQAVRGVPQVQQGPP--------------------TRIYVGSVFFDIGEPQLKAVFSAFGPVKTVSMIPNPET-GKHKGYGFVDFEEHPSAVQAITTMNGFDLAGR 260          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig97.24.6 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWX1_ECTSI1.730e-22171.13RNA-binding protein SiahBP n=2 Tax=Ectocarpus TaxI... [more]
A0A836CC18_9STRA1.630e-5046.64Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4PQL3_GUITH7.720e-3938.00Hypothetical protein n=2 Tax=Guillardia theta TaxI... [more]
A0A7S2AH99_9STRA5.920e-3633.33Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
L8GZG0_ACACA4.460e-3533.47RNA recognition motif domain containing protein n=... [more]
L1JR44_GUITC1.020e-3439.04Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A0U9HK97_KLENI5.840e-3437.70Putative RNA recognition motif containing protein ... [more]
W7U4B1_9STRA3.490e-3337.16PolyU-binding-splicing factor PUF60 n=2 Tax=Monodo... [more]
A0A5D6XHU0_9STRA2.640e-3128.29Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A7S1H1Q7_HEMAN3.380e-3139.23Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003954RNA recognition motif domain, eukaryoteSMARTSM00361rrm2_1coord: 664..744
e-value: 3.9E-6
score: 36.4
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 664..744
e-value: 0.0092
score: 24.7
coord: 433..507
e-value: 5.3E-19
score: 79.1
coord: 294..367
e-value: 2.8E-24
score: 96.6
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 434..505
e-value: 2.6E-15
score: 56.0
coord: 295..365
e-value: 1.6E-19
score: 69.5
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 432..511
score: 17.216459
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 293..371
score: 17.387012
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 280..375
e-value: 1.1E-24
score: 88.9
coord: 415..518
e-value: 1.5E-22
score: 81.9
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 658..756
e-value: 8.9E-20
score: 72.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 178..213
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..196
NoneNo IPR availablePANTHERPTHR47330POLY(U)-BINDING-SPLICING FACTOR PUF60-B-RELATEDcoord: 659..755
NoneNo IPR availablePANTHERPTHR47330:SF1POLY(U)-BINDING-SPLICING FACTOR PUF60-B-RELATEDcoord: 422..546
NoneNo IPR availablePANTHERPTHR47330POLY(U)-BINDING-SPLICING FACTOR PUF60-B-RELATEDcoord: 293..372
NoneNo IPR availablePANTHERPTHR47330:SF1POLY(U)-BINDING-SPLICING FACTOR PUF60-B-RELATEDcoord: 293..372
coord: 659..755
NoneNo IPR availablePANTHERPTHR47330POLY(U)-BINDING-SPLICING FACTOR PUF60-B-RELATEDcoord: 422..546
NoneNo IPR availableCDDcd12374RRM_UHM_SPF45_PUF60coord: 661..747
e-value: 5.09303E-24
score: 94.5998
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 286..372
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 431..743

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig97contigP-littoralis_Contig97:200381..213490 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig97.24.6mRNA_P-littoralis_Contig97.24.6Pylaiella littoralis U1_48mRNAP-littoralis_Contig97 200327..214568 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig97.24.6 ID=prot_P-littoralis_Contig97.24.6|Name=mRNA_P-littoralis_Contig97.24.6|organism=Pylaiella littoralis U1_48|type=polypeptide|length=759bp
MSDAMEVTTDPPASDSLEAAAAANLTNESADQDDGGAEVDISKPPASNTA
SDAADNGAVASAAVASATTATADPPPETPSPIETQAPATAADAAASSPKE
GVEGKTEDVSPPQATDTPAEAPPPQTTADTADPATAEGEKESPEDVEAMA
AAAIRAAAQAAAAGGGGAAAAAAAGNKEDGAAGTEQPKKKRTRRGGWDTP
SAAPAAGGAVKRGWGDAPKPVVAPVVPAMTPLQELQRKLAEEQVAAAMGQ
APSVTSVAAGAAAMGLTMGGMLPGAGAGGMPQNAPVVQRPNPRRLYIGSL
HYELKESDITAIFANFGPLKLVDMSHDKTTGRHKGFCFIEYADVRGADAA
LRAMNGFELAGRAIKVGRPYNTESGISGGIDGMGLPAAMQLPGMAAFMAQ
RSTAAAVPGAPGSGVAAEQLKAAMMNAAPAQTKIYVGNVEPHITTEMIKT
VFEPFGMVVGAEMVVDPNNPGHHKGFGFVQYAQETVARTVIDTMSNFELA
GRTLRVAWAQDQSKPALSVLPPGLTAAGAAAQAAAMAAKAAASAAGGAAA
ATAAARLTASRLQGFGGGGGAGFGGGGGGGAGFGNGSGAGFGNGGGAGFG
NGAGAGFINGAGAGNAGGAGVWVSGGSAGSGGAAAQQAQAIAAAAQQRAR
MSAAAGVPRVSRCVCLVNMLGPEDADDQETKAEILEEFGTCGTVLQLHVH
KQRASGGTVVAVRVFVVYADPNGAALAIRKMHGRFFAGRQVQAVAYDEGL
FSQGSLDS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003954RRM_dom_euk
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf