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Homology
BLAST of mRNA_P-littoralis_Contig97.24.6 vs. uniprot
Match: D7FWX1_ECTSI (RNA-binding protein SiahBP n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWX1_ECTSI) HSP 1 Score: 647 bits (1669), Expect = 5.470e-217 Identity = 404/568 (71.13%), Postives = 432/568 (76.06%), Query Frame = 1
Query: 643 WDTPSAAPAAGGAVKRGWGDAPKPVVAPVVPAMTP--LQELQRKLAEEQVAAAMGQAPSVTSVAAGAAAMGLTMGGMLPGAGAGGMPQNAPVVQRPNPRRLYIGSLHYELKESDITAIFANFGPLKLVDMSHDKTTGRHKGFCFIEYADVRGADAALRAMNGFELAGRAIKVGRPYNTESGISGGIDGMGLPAAMQLPGMAAFMAQRSTAAAVPGAPGSGVAAEQLKAAM-MNAAPAQTKIYVGNVEPHITTEMIKTVFEPFGMVVGAEMVVDPNNPGHHKGFGFVQYAQETVARTVIDTMSNFELAGRTLRVAWAQDQSKPALSVLPPGLTAAGAAXXXXXXXXXXXXXXXXXXXXXXXXXRLTA-SRLQGFGGGGGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVWVSGGSAG--SGGAAAQQAQAIAXXXXXRARMSAAAGVPRVSRCVCLVNMLGPEDADDQETKAEILEEFGTCGTVLQLHVHKQRASGGTVVAVRVFVVYADPNGAALAIRKMHGRFFAGRQVQAVAYDEGLFSQGSLDS 2328
WDTP+A G VK+GWGDAP PV P LQELQRKLAEEQVAAAMGQAP VTSV+AGAAA+GLTMG + GAG Q AP Q NPRR+Y+GSLHYELKESDIT+IFANFG LKLVDMSHD +TGRHKGFCFIEY DV+ ADAALRAMNGFELAGRAIKVGRP NT+SG++GGI+GMGLPAAMQLPGMAAFMAQ ST+AA GA GSGVAAEQLKAAM M APAQTKIYVGNVEPHITTEMIKTVFEPFGMVVGAEMV DP+NPG+HKGFGF+QYAQE+VARTVIDTMS+FELAGRTLRVAWAQDQSKPALSVLPPGL+AAGAAXXXXXXXXXXXXXXXXXXXXXXXXXRLTA SRLQG G GG A V V GGSAG GG + A GVP VSRC+CLVNMLGPEDADD++TKAEILEEFGTCGTVLQLHVHKQR S G V AVRVFVV++DPN AIRKMHGRFFAGRQVQA AYD G+FSQG LDS
Sbjct: 198 WDTPAAP---GAVVKKGWGDAP-----PVAPXXXXXXLQELQRKLAEEQVAAAMGQAPPVTSVSAGAAALGLTMGAAMQAPGAGTRTQTAP-AQPSNPRRIYVGSLHYELKESDITSIFANFGALKLVDMSHDSSTGRHKGFCFIEYVDVKSADAALRAMNGFELAGRAIKVGRPLNTDSGVAGGIEGMGLPAAMQLPGMAAFMAQHSTSAAG-GAQGSGVAAEQLKAAMGMTTAPAQTKIYVGNVEPHITTEMIKTVFEPFGMVVGAEMVQDPSNPGNHKGFGFIQYAQESVARTVIDTMSSFELAGRTLRVAWAQDQSKPALSVLPPGLSAAGAAXXXXXXXXXXXXXXXXXXXXXXXXXRLTAASRLQGLGNGGVANNGSNGG------------------------------------------VGVVGGSAGRMQGGG-----------------VGGATGVPGVSRCMCLVNMLGPEDADDEDTKAEILEEFGTCGTVLQLHVHKQRGSDGAVWAVRVFVVFSDPNETVTAIRKMHGRFFAGRQVQAAAYDHGMFSQGLLDS 696
BLAST of mRNA_P-littoralis_Contig97.24.6 vs. uniprot
Match: A0A836CC18_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC18_9STRA) HSP 1 Score: 194 bits (493), Expect = 1.310e-49 Identity = 118/253 (46.64%), Postives = 149/253 (58.89%), Query Frame = 1
Query: 934 RLYIGSLHYELKESDITAIFANFGPLKLVDMSHDKTTGRHKGFCFIEYADVRGADAALRAMNGFELAGRAIKVGRPYNTESGISGGIDGMGLPAAMQLPGMAAFMAQRSTAAAVPGAPGSGVAAEQ-----LKAAMMNAAP--------AQTKIYVGNVEPHITTEMIKTVFEPFGMVVGAEMVVDPNNPGHHKGFGFVQYAQETVARTVIDTMSNFELAGRTLRVAWAQDQSK---PALSVLPPGLTAAGAA 1644
R+YIGSL+YEL+ESDI AIF FG ++ VDMS D TG+HKGFCFIEY + A+AAL +MNGFELAGR IKVGRP NT S + G A M +PGM G+ L+AA+ AP QTK++VGNV+ I + IK +F PFG V+ E+V DP NPG H+G+GF+Q+ E +A + + M FELAGR LRV+WA Q K PA + P + AA AA
Sbjct: 120 RIYIGSLYYELQESDILAIFGAFGQIRAVDMSKDPATGKHKGFCFIEYMEPASAEAALNSMNGFELAGRPIKVGRP-NTGSTATPG-------AGMAMPGMTXXXXXXXXXXXXXXXXXXGMGVSPSIEAALQAALTPPAPQQPQVQLVGQTKLFVGNVDLSIPADAIKQIFSPFGQVLTCELVADPENPGKHRGYGFIQFTSEPIASSAMQAMEGFELAGRPLRVSWATSQPKSTAPAGTGQPIDIQAALAA 364
BLAST of mRNA_P-littoralis_Contig97.24.6 vs. uniprot
Match: A0A7S4PQL3_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PQL3_GUITH) HSP 1 Score: 161 bits (407), Expect = 2.220e-38 Identity = 95/250 (38.00%), Postives = 145/250 (58.00%), Query Frame = 1
Query: 910 VVQRPNPRRLYIGSLHYELKESDITAIFANFGPLKLVDMSHDKTTGRHKGFCFIEYADVRGADAALRAMNGFELAGRAIKVGRPYNTESGISG------------------------GIDGMGLPAAMQLPGMAAFMAQRSTAAAVPGAPGSGVAAEQLKAAMMNAAPA--QTKIYVGNVEPHITTEMIKTVFEPFGMVVGAEMVVDPNNPGHHKGFGFVQYAQETVARTVIDTMSNFELAGRTLRVAWA 1581
+V+ P RLY+GSLH++LKE+D+ AIF FGP+K ++MS++ TTG+ KG+ FIEY + ADA +AM+GF +AGR IKVGRP+NT S + G+ G+ LP +PG+A + AA++ A + +AA++ +A +N A +IY+G+V + +K +F+ FG + M+ +P N G HKG+GF++Y + A I M+ F+LAGR L+V WA
Sbjct: 79 MVKPPQRNRLYVGSLHFDLKEADVRAIFQPFGPIKTIEMSYEPTTGKSKGYAFIEYMNDAQADACEKAMDGFMIAGRPIKVGRPHNTVSANAPVTILPPQLLVSRPPAMAPLAAAGLGVPGL-LPGMAGIPGLAGQHLLQQRAASLLAAQQAALAAQKAQAQPLNTPVAGPPARIYIGSVLFDVKESEVKQIFQVFGSIKQISMIPNPEN-GKHKGYGFIEYEKHDDAVQAIQAMNGFQLAGRPLKVGWA 326
BLAST of mRNA_P-littoralis_Contig97.24.6 vs. uniprot
Match: A0A7S2AH99_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AH99_9STRA) HSP 1 Score: 154 bits (389), Expect = 8.390e-36 Identity = 164/494 (33.20%), Postives = 213/494 (43.12%), Query Frame = 1
Query: 934 RLYIGSLHYELKESDITAIFANFGPLKLVDMSHDKTTGRHKGFCFIEYADVRGADAALRAMNGFELAGRAIKVGRPYNTESGISGGIDGMGLPAAMQLPGMAAFMAQRSTA-----AAVPGAPGSGVAAEQLKAAMMNAAPA----------------QTKIYVGNVEPHITTEMIKTVFEPFGMVVGAEMVVDPNNPGHHKGFGFVQYAQETVARTVIDTMSNFELAGRTLRVAWA--------QDQSKPALSVLPPGLTAAGAAXXXXXXXXXXXXXXXXXXXXXXXXXRLTASRLQGFGGGGGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVWVSGGSAGSGGAAAQQAQAIAXXXXXRARMSAAAGVPRVSRCVCLVNMLGPEDADDQETKAEILEEFGTCGTVLQLHVHKQRASGGTVVAVRVFVVYADPNGAALAIRKMHGRFFAGRQVQAVAYDEGLFSQGSLDS 2328
R+Y+GSLHY+L E DI +F FG + V MS++ TG+ KG+CFIEY + A+ AL+AMNGFELAGR IKVG+P G G A G A R+TA A V A G A M A+ + +IYVGN+ I E ++TVFEPFG + +++ DP H+G+GF+QY A + M++FEL GR L+V WA Q Q + +VL P + A + +L A R G XXXXXXXXXX XXXXXXXXXXXXXXXX ++ RCV L NM+ E+A D E EI EE G V + VH G V +F++Y + AA A +H R+F GR + A YD G F G +
Sbjct: 112 RIYVGSLHYDLAEHDIRGVFEAFGKITEVTMSYEPATGKSKGYCFIEYENPNSANQALQAMNGFELAGRQIKVGKPDGAPGAGMMGASGSLSFATPTNSGPAIQAVDRNTAMLQAHALVQAALGKAQPATNALTLMDKASTGTDTAAAGVVANQSSDTRNRIYVGNISTDIGPEALQTVFEPFGRITDVQILPDPAGVAKHRGYGFIQYETNRAAIEAVSQMNDFELLGRRLKVNWANSATTTLNQSQVSASTAVLTPQMLAFQQSTVAQ---------------------QLAALRTA-------TGNTXXXXXXXXXXPSLPDQDSSPAVSXXXXXXXXXXXXXXXXDQ-------------------------------------------QLPRCVLLKNMVSEEEAADSELAGEIEEEGTKYGKVESVKVHMAEKQG-----VLIFLLYEAASSAARAQSTLHRRYFGGRIISAELYDHGKFIAGDFGN 529
BLAST of mRNA_P-littoralis_Contig97.24.6 vs. uniprot
Match: L8GZG0_ACACA (RNA recognition motif domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GZG0_ACACA) HSP 1 Score: 153 bits (386), Expect = 1.320e-34 Identity = 161/481 (33.47%), Postives = 230/481 (47.82%), Query Frame = 1
Query: 934 RLYIGSLHYELKESDITAIFANFGPLKLVDMSHDKTTGRHKGFCFIEYADVRGADAALRAMNGFELAGRAIKVGRPYNTESGISGG-------IDGMG--------LPA---AMQLPGMAAFMAQRSTAAAVPGA-PGSGVAAEQLKAAMMNAAPA--QTKIYVGNVEPHITTEMIKTVFEPFGMVVGAEMVVDPNNPGHHKGFGFVQYAQETVARTVIDTMSNFELAGRTLRVAWAQDQSKPALSVLPPGLTAAGAAXXXXXXXXXXXXXXXXXXXXXXXXXRLTASRLQGFGGGGGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVWVSGGSAGSGGAAAQQAQAIAXXXXXRARMSAAAGVPRVSRCVCLVNMLGPEDADDQETKAEILEEFGTCGTVLQLHVHKQRASG--GTVVAVRVFVVYADPNGAALAIRKMHGRFFAGRQVQAVAYDEGLF 2307
R+Y+GSL++EL E DI F+ FGP+K V ++ D T R KGF F+EYA A AAL+ MNGF LAGR +KVGRP+ +G+ G + G+ LP ++ L AA AQ++ AAA G+ P + E K AA A +IYVG++ +T++ IKTVFE FG V ++ +P G HKG+GFV+Y + A I M+ ++L GR ++V A + P L GA L + L GF G +G XXXXXXXXXXXXXXXX + Q A+ AR + G + SRCV L +M GPED DD E + EI +E G V ++ ++++R S G V+ +++F+++ + A A+ ++GR+F GRQ++A YDE F
Sbjct: 252 RIYVGSLNFELSEEDIKTAFSPFGPVKSVSLTKDPLTQRSKGFAFVEYAYPDAATAALKHMNGFMLAGRQLKVGRPHTPGAGLPGXXXXXXVMMPGLSPFPQLNPSLPVMNPSILLQANAAIEAQKAAAAAANGSQPTPEMMQEFTKLTGKTAADATASNRIYVGSIHWDLTSDDIKTVFEAFGTVKSCVLMPNPET-GKHKGYGFVEYEESKSAEEAIQQMNGWDLGGRPIKVGRAISSA--------PILPTPGAGLLNPSG--------------------LPSPMLGGFPMPGMSGMPGLLPGMXXXXXXXXXXXXXXXXLSSASAIAQAIANKKVEESLSHEENLTL--------STPNQRYALMQKL---ARGTITGG--KSSRCVVLKDMAGPEDVDD-ELEGEITDEATKYGIVERVVIYQERQSEKPGDVI-IKIFILFQSADQAQKALTSLNGRWFGGRQIKAAFYDEKKF 688
BLAST of mRNA_P-littoralis_Contig97.24.6 vs. uniprot
Match: L1JR44_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JR44_GUITC) HSP 1 Score: 148 bits (374), Expect = 2.290e-34 Identity = 89/228 (39.04%), Postives = 135/228 (59.21%), Query Frame = 1
Query: 904 APVVQRPNPRRLYIGSLHYELKESDITAIFANFGPLKLVDMSHDKTTGRHKGFCFIEYADVRGADAALRAMNGFELAGRAIKVGRPYNTESGISGGIDGMGLPAAMQLPGMAAFMAQRSTAAAVPGAPG----SGVAAEQLKAAMMNAAPA--QTKIYVGNVEPHITTEMIKTVFEPFGMVVGAEMVVDPNNPGHHKGFGFVQYAQETVARTVIDTMSNFELAGRTLR 1569
A +V+ P RLY+GSLH++LKE+D+ AIF FGP+K ++MS++ TTG+ KG+ FIEY + ADA +AM+GF +AGR IKVGRP+NT S + P +L F+ S+ P P + +AA++ +A +N A +IY+G+V + +K +F+ FG + M+ +P N G HKG+GF++Y + A I M+ F+LAGR L+
Sbjct: 89 AGMVKPPQRNRLYVGSLHFDLKEADVRAIFQPFGPIKTIEMSYEPTTGKSKGYAFIEYMNDAQADACEKAMDGFMIAGRPIKVGRPHNTVSANA--------PVHRRL----FFLLNFSSVDLQPWPPSLPQQAALAAQKAQAQPLNTPVAGPPARIYIGSVLFDVKESEVKQIFQVFGSIKQISMIPNPEN-GKHKGYGFIEYEKHDDAVQAIQAMNGFQLAGRPLK 303
BLAST of mRNA_P-littoralis_Contig97.24.6 vs. uniprot
Match: A0A0U9HK97_KLENI (Putative RNA recognition motif containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HK97_KLENI) HSP 1 Score: 147 bits (372), Expect = 7.310e-34 Identity = 144/503 (28.63%), Postives = 210/503 (41.75%), Query Frame = 1
Query: 934 RLYIGSLHYELKESDITAIFANFGPLKLVDMSHDKTTGRHKGFCFIEYADVRGADAALRAMNGFELAGRAIKVGRPYNTESGISGGIDGMGLPAAMQLPGMAAF-------------------------MAQRSTAAAVPGAPGSGVAAEQLKAA---MMNAAPAQTKIYVGNVEPHITTEMIKTVFEPFGMVVGAEMVVDPNNPGHHKGFGFVQYAQETVARTVIDTMSNFELAGRTLRVAWAQDQS---------KPALSVLPPGLTAAGAAXXXXXXXXXXXXXXXXXXXXXXXXXRLTASRLQGFGGGGGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVWVSGGSAGSGGAAAQQAQAIAXXXXXRARMSAAAGVPRVSRCVCLVNMLGPEDADDQETKAEILEEFGTCGTVLQLHVHKQRASGGTV-VAVRVFVVYADPNGAALAIRKMHGRFFAGRQVQAVAYDEGLFSQGSLDS 2328
R+Y+GS++YEL ESDI F+ FG + +DM D T +HKGFCFIE+ A+ AL MN F LAGR +KVGRP+N +G+ GGI P Q AAF +AQ+ A P G+ AA ++N + +IYVG++ I+ E IK VF+ FG V ++ +P G HKG+GF+++ Q A+ ID+M+ F+L GR L+V WA + P L +P G+ A XXXXXXXXXXXX G+ + +RCV L NM+GPE+ D + + E+ EE G V ++ +++++AS + V++FV++ + A A R + R+F GRQ++A YDE F + L
Sbjct: 89 RIYVGSIYYELNESDIILAFSAFGSIHKIDMPRDAATAKHKGFCFIEFHSSEAAENALNTMNEFVLAGRKLKVGRPHNI-AGMPGGIVVSTTPPTPQA--QAAFKQAQQQAQAISAQLSLRQQQQXXLLIAQQQQALENPHLVAQGLLPPPNPAAIQALLNPSRPDARIYVGSIYYEISEEDIKAVFQAFGQVKSCNLIPNPET-GKHKGYGFIEFEQPEAAKAAIDSMNGFDLGGRQLKVGWAAANAGLPTPPPLPNPNLPNMPFGMPPMPAVLPPVTFSPNPFQPXXXXXXXXXXXXXXXXXXX---------------------------------------------------------------------------------------------GL-KPTRCVLLKNMVGPEEVD-ADLEGEVTEECSKHGEVERVVIYQEQASARKDDIQVKIFVLFRTVSEAQRAHRSLDKRWFGGRQIEANFYDEARFKRQDLSG 492
BLAST of mRNA_P-littoralis_Contig97.24.6 vs. uniprot
Match: W7U4B1_9STRA (PolyU-binding-splicing factor PUF60 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U4B1_9STRA) HSP 1 Score: 145 bits (366), Expect = 8.030e-33 Identity = 81/218 (37.16%), Postives = 122/218 (55.96%), Query Frame = 1
Query: 934 RLYIGSLHYELKESDITAIFANFGPLKLVDMSHDKTTGRHKGFCFIEYADVRGADAALRAMNGFELAGRAIKVGRPYNTESGISGGIDGMGLPAAMQLPGMAAFMAQRSTAAAVPGAPGSGVAAEQLKAAMMNAAPAQTKIYVGNVEPHITTEMIKTVFEPFGMVVGAEMVVDPN-NPGH-HKGFGFVQYAQETVARTVIDTMSNFELAGRTLRVAWA 1581
R+Y+GSLHY+LKE DI +FA FG ++ ++MS + TGR KGF F+++ A AL+ MNGF+LAGR +KVGRP SG Q +A G PG+G A+++ A ++YVG++ ++ E+++ +F+ FG + ++ DP NPG H+G+GF+++ E A T I TM FEL GR ++V WA
Sbjct: 215 RIYVGSLHYDLKEDDIRKVFAPFGAIRSINMSFEPGTGRSKGFAFVDFEQAESATMALQTMNGFQLAGRTLKVGRPTPGGSGXXXXXXXXXXXXXXQ-------------SAVYGGLPGAGFGAQRVGGGGGGA-----RVYVGSIPFEVSEEVVRGLFQSFGKIRSFSLLPDPQMNPGRLHRGYGFIEFDSEQAAATAIQTMQGFELQGRAMKVGWA 414
BLAST of mRNA_P-littoralis_Contig97.24.6 vs. uniprot
Match: A0A7S1H1Q7_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H1Q7_HEMAN) HSP 1 Score: 133 bits (334), Expect = 5.790e-31 Identity = 82/209 (39.23%), Postives = 112/209 (53.59%), Query Frame = 1
Query: 934 RLYIGSLHYELKESDITAIFANFGPLKLVDMSHDKTTGRHKGFCFIEYADVRGADAALRAMNGFELAGRAIKVGRPYNTESGISGGIDGMGLPAAMQLPGMAAFMAQRSTAAAVPGAPGSGVAAEQLKAAMMNAAPAQTKIYVGNVEPHITTEMIKTVFEPFGMVVGAEMVVDPNNPGHHKGFGFVQYAQETVARTVIDTMSNFELAGR 1560
RLY+GSL+Y++K++D+ IFA FGP+K +DMS++ TG+ KGF F+E+ D A+A AMNGF L GRAIK+GRP++T + G + MA A R G P T+IYVG+V I +K VF FG V M+ +P G HKG+GFV + + A I TM+ F+LAGR
Sbjct: 76 RLYVGSLNYDIKDTDLRPIFAPFGPIKCIDMSYEPATGKSKGFGFVEFYDGLHAEACQMAMNGFNLGGRAIKIGRPHHTGPQSR---EASGEEKRPYIMPMALQQAVRGVPQVQQGPP--------------------TRIYVGSVFFDIGEPQLKAVFSAFGPVKTVSMIPNPET-GKHKGYGFVDFEEHPSAVQAITTMNGFDLAGR 260
BLAST of mRNA_P-littoralis_Contig97.24.6 vs. uniprot
Match: A0A5D6XHU0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHU0_9STRA) HSP 1 Score: 141 bits (355), Expect = 9.060e-31 Identity = 129/456 (28.29%), Postives = 186/456 (40.79%), Query Frame = 1
Query: 931 RRLYIGSLHYELKESDITAIFANFGPLKLVDMSHDKTTGRHKGFCFIEYADVRGADAALRAMNGFELAGRAIKVGRPYNTESGISGGIDGMGLPAAMQLPGMAAFMAQRSTAAAVPGAPGSGVAAEQLKAAMMNAAPAQTK-IYVGNVEPHITTEMIKTVFEPFGMVVGAEMV-VDPNNPGHHKGFGFVQYAQETVARTVIDTMSNFELAGRTLRVAWAQDQSKPALSVLPPGLTAAGAAXXXXXXXXXXXXXXXXXXXXXXXXXRLTASRLQGFGGGGGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVWVSGGSAGSGGAAAQQAQAIAXXXXXRARMSAAAGVPRVSRCVCLVNMLGPEDADDQETKAEILEEFGTCGTVLQLHVHKQRASGGTVVAVRVFVVYADPNGAALAIRKMHGRFFAGRQVQAVAY 2292
RRLYIG+L+Y+LKE DI FA FG +K +D+S + R KGFCF+E+ DV A+ A++ +NG +LA R I+VGRP+ S + G +G A LP TK IYVGNV + + ++++F PFG++ M + P H+G+GF+++ +E+ A+ I M+ FELAG+ LRV A +AA A T+S G G G S G A ++ +A + A G R RC+CL+N++G + DD E + E+ EE G G V + +H+ A VRVFV++ D A A + +HGRFF G QVQA Y
Sbjct: 368 RRLYIGNLYYDLKEDDIRNTFAPFGQIKSIDLSLEPGHNRSKGFCFLEFEDVLAAETAVQLLNGSQLANRTIRVGRPHRGSS--NPGDTSIGQQAIKDLP---------------------------------------TKCIYVGNVRVELNSHHLESIFSPFGVIRTCVMAALAPLESNAHRGYGFLEFTEESAAQNAIQHMNGFELAGQNLRVGKA---------------SAAAIAINL-----------------------ATSSDRVVRGENGELGA--------------------------------------------------------SAGLAPKKGRAFDDDDVEGVKDVAEPG--REKRCLCLLNLVGNGEVDD-ELEGEVREECGRFGAVETVAIHEMEAH------VRVFVLFEDEPSALKAKQALHGRFFGGNQVQAHFY 679
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D7FWX1 |
| Preferred name | PUF60 |
| PFAMs | RRM_1 |
| Model size | 3317 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K11798,ko:K12811,ko:K12838 |
| KEGG Pathway | ko03040,map03040 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000003,GO:0000245,GO:0000375,GO:0000377,GO:0000380,GO:0000381,GO:0000398,GO:0001558,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0003727,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006366,GO:0006376,GO:0006396,GO:0006397,GO:0006401,GO:0006417,GO:0006725,GO:0006807,GO:0007276,GO:0007281,GO:0007282,GO:0007623,GO:0008150,GO:0008152,GO:0008187,GO:0008266,GO:0008285,GO:0008356,GO:0008380,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009299,GO:0009889,GO:0009891,GO:0009893,GO:0009894,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0010638,GO:0016043,GO:0016070,GO:0016071,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0019953,GO:0022412,GO:0022414,GO:0022607,GO:0022613,GO:0022618,GO:0030054,GO:0030154,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031974,GO:0031981,GO:0032204,GO:0032206,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032774,GO:0032991,GO:0033043,GO:0033044,GO:0034248,GO:0034250,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0040008,GO:0042127,GO:0042162,GO:0042752,GO:0042789,GO:0042802,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043484,GO:0043487,GO:0043488,GO:0043565,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045727,GO:0045893,GO:0045926,GO:0045935,GO:0046483,GO:0046700,GO:0048024,GO:0048468,GO:0048511,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048609,GO:0048856,GO:0048869,GO:0050684,GO:0050789,GO:0050790,GO:0050794,GO:0051052,GO:0051054,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051301,GO:0051338,GO:0051347,GO:0051704,GO:0051972,GO:0051973,GO:0060255,GO:0061013,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097167,GO:0097659,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1902680,GO:1903311,GO:1903506,GO:1903508,GO:1904353,GO:1904355,GO:1905661,GO:1905663,GO:1990904,GO:2000112,GO:2000278,GO:2000573,GO:2001141,GO:2001252 |
| Exons | 12 |
| Evalue | 2.83e-222 |
| EggNOG OGs | KOG0124@1|root,KOG0124@2759|Eukaryota |
| EC | 3.6.4.13 |
| Description | RNA splicing |
| Cds size | 2277 |
| COG category | S |
| BRITE | ko00000,ko00001,ko01000,ko03041,ko04121 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791889.1405227-UTR-P-littoralis_Contig97:200326..200380 | 1680791889.1405227-UTR-P-littoralis_Contig97:200326..200380 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig97 200327..200380 + |
| 1680791889.3232982-UTR-P-littoralis_Contig97:213490..213659 | 1680791889.3232982-UTR-P-littoralis_Contig97:213490..213659 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig97 213491..213659 + |
| 1680791889.3356209-UTR-P-littoralis_Contig97:213751..214568 | 1680791889.3356209-UTR-P-littoralis_Contig97:213751..214568 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig97 213752..214568 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791889.1554132-CDS-P-littoralis_Contig97:200380..201079 | 1680791889.1554132-CDS-P-littoralis_Contig97:200380..201079 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig97 200381..201079 + |
| 1680791889.1697776-CDS-P-littoralis_Contig97:205096..205261 | 1680791889.1697776-CDS-P-littoralis_Contig97:205096..205261 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig97 205097..205261 + |
| 1680791889.1846004-CDS-P-littoralis_Contig97:205632..205697 | 1680791889.1846004-CDS-P-littoralis_Contig97:205632..205697 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig97 205633..205697 + |
| 1680791889.2145333-CDS-P-littoralis_Contig97:206163..206329 | 1680791889.2145333-CDS-P-littoralis_Contig97:206163..206329 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig97 206164..206329 + |
| 1680791889.2272604-CDS-P-littoralis_Contig97:207115..207152 | 1680791889.2272604-CDS-P-littoralis_Contig97:207115..207152 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig97 207116..207152 + |
| 1680791889.239638-CDS-P-littoralis_Contig97:208869..209011 | 1680791889.239638-CDS-P-littoralis_Contig97:208869..209011 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig97 208870..209011 + |
| 1680791889.2559407-CDS-P-littoralis_Contig97:210312..210454 | 1680791889.2559407-CDS-P-littoralis_Contig97:210312..210454 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig97 210313..210454 + |
| 1680791889.2718735-CDS-P-littoralis_Contig97:211143..211203 | 1680791889.2718735-CDS-P-littoralis_Contig97:211143..211203 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig97 211144..211203 + |
| 1680791889.2821963-CDS-P-littoralis_Contig97:212055..212580 | 1680791889.2821963-CDS-P-littoralis_Contig97:212055..212580 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig97 212056..212580 + |
| 1680791889.2949808-CDS-P-littoralis_Contig97:212899..212986 | 1680791889.2949808-CDS-P-littoralis_Contig97:212899..212986 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig97 212900..212986 + |
| 1680791889.308249-CDS-P-littoralis_Contig97:213301..213490 | 1680791889.308249-CDS-P-littoralis_Contig97:213301..213490 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig97 213302..213490 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig97.24.6 >prot_P-littoralis_Contig97.24.6 ID=prot_P-littoralis_Contig97.24.6|Name=mRNA_P-littoralis_Contig97.24.6|organism=Pylaiella littoralis U1_48|type=polypeptide|length=759bp
MSDAMEVTTDPPASDSLEAAAAANLTNESADQDDGGAEVDISKPPASNTA
SDAADNGAVASAAVASATTATADPPPETPSPIETQAPATAADAAASSPKE
GVEGKTEDVSPPQATDTPAEAPPPQTTADTADPATAEGEKESPEDVEAMA
AAAIRAAAQAAAAGGGGAAAAAAAGNKEDGAAGTEQPKKKRTRRGGWDTP
SAAPAAGGAVKRGWGDAPKPVVAPVVPAMTPLQELQRKLAEEQVAAAMGQ
APSVTSVAAGAAAMGLTMGGMLPGAGAGGMPQNAPVVQRPNPRRLYIGSL
HYELKESDITAIFANFGPLKLVDMSHDKTTGRHKGFCFIEYADVRGADAA
LRAMNGFELAGRAIKVGRPYNTESGISGGIDGMGLPAAMQLPGMAAFMAQ
RSTAAAVPGAPGSGVAAEQLKAAMMNAAPAQTKIYVGNVEPHITTEMIKT
VFEPFGMVVGAEMVVDPNNPGHHKGFGFVQYAQETVARTVIDTMSNFELA
GRTLRVAWAQDQSKPALSVLPPGLTAAGAAAQAAAMAAKAAASAAGGAAA
ATAAARLTASRLQGFGGGGGAGFGGGGGGGAGFGNGSGAGFGNGGGAGFG
NGAGAGFINGAGAGNAGGAGVWVSGGSAGSGGAAAQQAQAIAAAAQQRAR
MSAAAGVPRVSRCVCLVNMLGPEDADDQETKAEILEEFGTCGTVLQLHVH
KQRASGGTVVAVRVFVVYADPNGAALAIRKMHGRFFAGRQVQAVAYDEGL
FSQGSLDS* back to topmRNA from alignment at P-littoralis_Contig97:200327..214568+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig97.24.6 ID=mRNA_P-littoralis_Contig97.24.6|Name=mRNA_P-littoralis_Contig97.24.6|organism=Pylaiella littoralis U1_48|type=mRNA|length=14242bp|location=Sequence derived from alignment at P-littoralis_Contig97:200327..214568+ (Pylaiella littoralis U1_48)
GACAGCTGAAGAGCCTCGCTAGATTCACTACTTGTTCCTGCAGGGGTGTT
GAAAATGAGTGACGCTATGGAAGTGACCACAGACCCTCCCGCCTCCGATT
CACTGGAAGCTGCTGCTGCTGCGAATCTGACAAACGAGTCTGCTGACCAA
GACGACGGTGGTGCTGAAGTCGATATTTCGAAGCCCCCCGCCTCCAACAC
CGCAAGCGACGCTGCTGACAACGGAGCCGTTGCCTCGGCTGCGGTCGCCT
CTGCTACTACTGCTACCGCAGATCCTCCTCCAGAAACCCCCTCTCCGATC
GAAACCCAAGCTCCCGCTACTGCCGCTGATGCAGCAGCATCCTCTCCCAA
AGAAGGTGTCGAAGGCAAGACCGAAGATGTCTCTCCTCCTCAGGCGACAG
ACACACCCGCCGAGGCCCCCCCTCCTCAGACGACAGCAGACACGGCGGAC
CCGGCCACCGCCGAGGGCGAGAAGGAGAGCCCCGAGGACGTTGAAGCTAT
GGCTGCGGCGGCAATCAGGGCGGCAGCACAAGCGGCAGCCGCAGGCGGCG
GTGGAGCAGCAGCAGCAGCAGCAGCAGGAAATAAGGAGGACGGCGCTGCT
GGTACGGAGCAGCCGAAGAAGAAGCGCACGAGGCGAGGAGGATGGGATAC
CCCTTCCGCTGCTCCCGCGGCTGGTGGCGCGGTGAAGAGGGGGTGGGGGG
ACGCGCCCAAGCCCGTGGTGGCGCCTGTGGTTCCCGCAATGACCCCGTTG
CAGGTAAGACTGGCCGATATCCATCGTCGTTTTATAACATGCGCGCGGTG
GCACAGCAGTATTAGTATTTGCGACACCTCTCTGCAACCCTTTTCCCCTC
TCATTTCAAGCACTTGAGTCTCGCGGGCATGTATGTACTGCTGTACTGCT
GTATAACACTCCTATTATATGATACTCCCGAGTATAACGAAGCATTAGCA
GAGCAGTACTTGCGCAATGTGTGTTGTCTTTGATGCTGCTGTACAAAGTA
CAGCATTACAGCATTACATGCTACATACAGAACAATGTGGGACCATGCTG
TACTTTGTTTGCACGTCGCCATCCCAAACGTTCTGGACGCCATCTTCAAA
TTTGGATGATACGCACAGCAGTCGTTTGTACGTGGCCATCCCAAACGTTC
TGGACGCCAGTCTTCAAATTTCGGCAGAGAGGGCGCACCAGCAGAGGGGA
TCGATCACACAGGAGCAAGGCCAACACAGGATTTTTCTTGGATTTTTCTT
TAGGCCATTAACATTCTTTCCGCTGGGTCCGACCGTCCCTCCCCCTCTTG
ACTTTTGACTCCCTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT
TGTTGTCTTCAATACCATTCCGATCCCTCCTCAGTACCTTCTAATGTCCG
TACTCCACCGATCAGGTACGATTTCCGTGGTCACAGGCTGCTTTCCCCAG
AGGAGGTATATAGTACTCGGGAGATTCCCTGAGTCCACCAAATTAAAGGC
ACGATAAGGAAAAGCGAGTCGAATTTTCAATTTTCAATTTTGTTTACTCT
CTGTAAAACCAATCGCTTCCCACCTCCGTACCATCTGTACCGTCGGTGAC
GTGAGATAACACCCCCCCCCCCCTTAACCGGAATATACTGCTGTTGCACG
GGTCTATTTTCCATTTTTCGTAACGAAGTGTGTGCCAACACCACAAGACA
TGCTTTCGAAAAGCTTTCGGAAAGATCTTTTTAAGGCCCCCCCCCACTGT
CGGCACTGGCACTCGTCTTGCTGCGGAGTGCAAGCAGTAAGCTTTCAAAT
TCAGTCTGATCGGGGGGGGTGGTATCAAATGTCACGCACGGCAATGAGCA
CTAACTGCTGAGTGGAGAGAAATCCCCGCTTCACCCGGATTCGATCTCAC
GATCCATCCATTCCATGATATGTTGTGAACCACCGGGGCGCCAGGGGCGC
ATATATTCCCAGGAATTTTACAAGAATGTCGTGTGTTGCTGTAAAGCAGC
AAATAAAAGGGCTTCTAGCCGCTTTTTCTCTCCGGCTCCGGCAGTGCAAC
GAAAAAAACCTCTACTCGTATCAAACAATGCAGCAGCTGCGAAAGCACCA
CATCCTGGCGCGGATGTGTTTATTGATGCTTGTATTTGATACTGGTACGT
ACTTCGCAAACATACATGATTATCGTTCGGGCCAAGTGCTGTCTGTGTGC
CGGCTTTCACGACGGCCGTGGGGGCAAGGCACGATGACAAGTTTTAATTC
CAGGACGAAGAAATATGTCTAGGGATATTTATTGGTGTACATGCACGTGA
TCTTTTGCCCTGTCCCGCCTAGGGCCGCACTCTCGGGATCGCACCATATT
TGTGCGCAGGCGTTCCGGTGACGTGGAAGCAGCCGTAGTGAAGTCCCAGC
GAAATCGCCTACTGCTCGCACAGCAGTGGGCAGCGGGGGAGACCGTTCAA
TCACCGCATTAAATCAGAACCCATGGGTGAGGGCCGGGTCGGTTCAACGA
AAGCGCTTGTCCAAGCATTTTTTGCTCCTGCAAATCGCTGCTTCGAATTC
ACCAAATTGCCCCCGAGATCGAGCTCCGTCGTTTTTGGCTGGATGCTGCT
GCTGCTGCTGCTGCTGCTGCCTGGGCGTATGGCTCCCCTCCCACACCACA
TGAGCAGGCCGGACTGCTGTATCAATATATTTGGCCGCAACTGCTTTGAG
GGGTGGAGTACAGAGCAGTGGGAGCCTACGCCACGGAACAAGAAGCTTTT
ATATGACTATGGCAAATAGTGGATTTGTTTATTTTGTGTTGGTTGTGCAA
AAACGAAATCAAAACAAAACAAAACAAAACAGCGTGTGGGGCAATTCAAC
TCAGCCTCTCGGCCTCTTTTCGAAAGCTGTATGATACACAGCTGTGTCCT
GAAGAGTGGCAAAGCAGCCCTTGAATGCCGGTTCCTTTTCCTGAAGCTGA
TGGGTGGGTAACGAATAGGCCGCGACAGACACTGCGGCCCGCCGAGAAGC
TCAGAGGAGTTCTGCGGGTGTACTCCGCACCCTTACAGCTAGGAATGATG
CTCTTTCGGCGCATGAGTATTGTGAGGTTTTACACGTATAACGCCACGCG
ACGTCGGAGACTGACATTTTCTACCGCTGTGCTTGCCCTCTCTCTTCGTG
TGTGTGTGTGTGTGTTTTCTCTCTCTTTTTTTTTCGTGTATTCTTTTTGT
CCGTCTCCTCTTTTCCATTTTTCCCTTCCACCCTCTACTGCCGTGTGCCT
CTTTTTTCATGTTTGTTGTTGTTTTTCTTGTTTCTTTTTCTTGTTTCTTT
TTCTTTCGCGTGGCCTTTGATGTCATGTTTCATGTCATGTCACGTCATTT
CTTTGTCTTGTTTTTCCCGGCGTCCTGTTCTCTGTCTCTCCCCCTGCTGT
CGTTCACGTTGCCACATGCCCTGGCCGATCTCGCCGTGTCTCTTTTCCGC
AACTCCGAATCCCGGTCCTCCTTTTTTCTCTCCTCTCTCCCGCTTGGCGG
CCGATTTCTGTCATCTTCTTTCTATACCCGCGTTTGTCTCTTCTGCTCTC
GTCGTTTTGTGTACCCGTATTTGCCTCTCCTGCTCTCGTCGTTGTTGCTT
TCGCTTTCTTATTGTCTACCCCTTCATCTCTGTCTTCTCCATCTCCTATC
TCTATCTCTTTCTCCTCTCTATCTCTGTATCTTTGTTTTTCTATCCTATC
CCCCTCTCTCACTCTCTCTTTGTCTTTTTCTTTCTCTATTCTCTCTTGTC
TCTCTCGCTGTCGCCGACCTGTTCTCCCGGTCGACTGCCTCCCTCACGTC
TCCGCCTTCGTCTGTCCACTCTACGCCGTTTTCGAAACTCGCCTGTACTT
TCGTGCGCCTCTTGTTTTGTCATTCTTGTTTTTTCCTGTGTCGACCTTTG
TTGGGTGTTTTCCTTGTCCCCCCCCCCCTACCCGGCTGGTCTTCTCTTTC
CCGCTCTCGTTGACGTGTTGACTTCTGCCCTCGGCCTTCCAATTTTCCGT
GAATTTTCCTTGTGGCCGTGTATCATACGTACCGAAGACCAACACGGAGT
CTGATTTGGTGCTGGGTGGTATGTAGTGCATGCGGCGTGAGTTTCGGGCC
ACCACAGCTTTCCCCGAGCACAGGCACTCACAAGGTCACAATCGAAGTGG
GACGTGTATTTGCAGCACATCAGTATCATATGTCATACGCATGTGTAGGA
CTGATTTTAGAGAAGTTTTCGGAGAAACCTCCGCGAAGAAAGAAGACCGC
TGCCACAACTGCAGCTGTATTTCAGACAGAGGGAATAGCGTACGCGACCA
TGTGTCCACTCGGTCTTCTTCCTTCTTTTTTGAAGGGTTGTTGCATCTGT
TAGAGGGGTCTCGCGTCTGGCGAACCTTTTTTTTTTTCTGCTTGCGTTAA
AAGGGCGTGACCATGCTATCGTGTGGGCCTTGTGCTCAGGAGTCGTAGTG
GTACCTCGCTAAAATCATGAGCAGCTGAGCGGCCTCGCTCCAGCCGCACC
GCTGTTTACAAATAGATTCGATTTATGAAAGGCGTAAGCGGTGTGCAAGT
GTCGAAACTGGTACAGTACTCCCAAGTCTTTTTTTGGGCACTTTTCCTGT
TCAGGAGAGGTTGACAAACGTCAATCGCGGTTGATTGATTCCGCGTCACG
GCAGGGGTTATTCGATGCTTGTCAACGAATGTGATGGGAATCGTGGTTTT
GTCGTGTTATTTGGTTTTGTGCATCGTGTTTCGTGTTTGTTGAAAATCTT
GTTTCTTTGCTCCCGATCAGGAGCTGCAGCGCAAGCTTGCCGAGGAGCAG
GTGGCAGCCGCGATGGGCCAAGCTCCATCGGTAACCTCGGTGGCGGCAGG
AGCCGCTGCGATGGGGCTCACCATGGGAGGCATGCTGCCTGGCGCGGGGG
CAGGGGGCATGCCGCAGAATGCTCCTGTCGTGCAGGTAAGTTTGTCCATG
TTTCCTGCTGTAAGCAACAAGTTTTTACGGCAGGGCTGTTTGTGCTGCAG
CACCAGACGCGAAAGTGATGCAGGGGATACTGCTGTCTGTTTGTTTTGAC
TTCTGCTGTACCATTTACACTCACCACAAGTAGCATGTCGGCGGCATTCC
CTGTTTTTCCTGCCGCAAACCATGCCCCAAGGACGTAAGTCGGTACTCTG
CTGCGTGGACTGCTCTACCAGACGCATTGAGTACTCCCGTTCGATGTGTC
GTTTCGTTTGGAGTCCTTTTTGTTTCCCTTTTTTCGCCATTTGATGAAGT
GACCATCGACTCCCCCTCCTTTTTCGGGCGCGGCGCATGAAATAAACACA
ACACAGCGCCCCAACCCGAGGCGCCTGTACATCGGCTCTCTCCACTACGA
GCTCAAGGAGAGCGACATCACGTGAGGAGTGTTTTGTTCGGACGTGTCTT
AGATAGCCTTTTGTTGTCGTTGTTGTTGTTGCATGTTGTGATGGCGAGGT
AACTCTACAGCAGTAACCCGTCGACCTTGGGAGGCCCTGGTCATATTATA
GCCGTTGCGTCAATCCACGGTGCCCCACACGAAGCGCACCATACATATTT
ATTGTTATCATTCTTGATTTCTGATTTGGTTAGGCTGTTTGTTCTCTGTC
CTTTAGTTTCACAGAGGTGGGTGGAGACACACACCACCTTGATGAGATGA
ACGTAAGGATAAGAAAATGGATGAACCAGCCAAACTCTTTTCCCTCCGCA
CAATGATGCTTAACGCTTGAACTGGATGTTTACTCCGCCCCTCCCCCTCT
CTGCGCCCACGGTGATTCTTTTTGCGACGCTCTGTCTGCTTGATAACCAC
AATTTATGGTCTTTACACGTTCCCCGAAAAAAAAAAGAGCAATATTTGCT
AACTTTGGGCCTCTGAAGCTCGTGGACATGTCGCACGATAAGACCACCGG
TCGCCACAAGGGCTTCTGCTTCATCGAGTATGCAGACGTCAGGGGAGCAG
ACGCAGCACTGAGGGCCATGAATGGATTCGAGCTCGCGGGCCGCGCCATC
AAAGTAAGTTTTTTTTGTTGTTCTTGGTGAGGAAGGAGATTTGAAGGCTG
CATGGAACATGGTGTCCTACCGCGTTTAGGGCCTAGATATTTCTGCTGAC
CTTGCGAAGGCTGCCACAGTAAGGTCAACCGCGTCGGCATTGCTCTCCAT
GTCGAACTCATTTTGTCCCTGTTGGACATCACTAGGCTGTTGGTAATGGA
CAACCCCAATGCCATCACTACGACCTATGTCGAACCTCTGTTGTCCATAT
TGGTATCTTGCCGCGAAACTGTTGGTAGCGTCGCACTGTCCGTGTCGAAC
CTGTGCTCTGTCCCTGCTGAACACCGGCACTACCGACAGCCCAACGGCGA
GATGTTCAACAGGGACAGCAGAGGTCCGACATGAACAGCAGTGATGGCAA
TGAGGTTGTGCTTGTCAAGCTTCGCAATCTCATGGGAAGGCACGGCATGT
CGACAGAGAAAAACCGAACGATCACCGCCTAGGATATGCCATAGAACACA
AGGCTCTGCAAAACAGGCGTGTGCGTGTGTATGTATGCGTTTGTATTGTG
CAGTGCTGTTTTAGCAGAGACCACGAAGGAAGCCAGCTGATGACAATTTG
TTTTGCGGGAGGGGGGTGTTGTAGGCTCTCGACACACGTAGCTTCACATT
CAGCACATACGCGCGTGTGCGAGTGCTCAGTGAGGCACGGAGCTCTTAAA
CATGGCATGAAATCTTAACACGCTTCCTTGCCTCTACCTCCCCCCCCCCT
CCCGCGGCACCGGAACGCCTCATGCTGATAAAACTCCAGGTTGGGCGACC
GTACAACACTGAATCAGGCATCTCAGGTGTGTACACAAAGAAAAAAGAAA
AAAGAAACAAGCCGTTTGCCGATCTGCCATACCGTTTGGTTTGGATATAG
TTTTGTAGTATGAAATGATGAGGGCGTACGGTACGTAATATCATGCCCCG
AGATCGGGGCATGGGTTTATCATGTTCCTCGAGGGCTCTTTCGTTTCAAT
ACGCCACAAACAAAAAAAATCTTCCCAAAATAAAGGACGTTTTAATAAAC
ATTTAACTTGAAAGGAAGCCTTTTTTCAGGGCCGTACGTGGTATTGTGAT
GGGATGGTATACCATCATTAAATGGTATGGTATGGTATGGTATGGTAATG
GTTGCGGAATTCTGGTCCCATCACCAGATACCATCAAGTGACCACCACGC
CATTCGAAGGCACCATCGTTAAATGGTGCTGGTTTTTGAACGCTTTCCAT
CCCATCTAATTTACCATCACAGCTGCTGAAGTTTCCACCATCCCATCGAC
AACAGTCTTCTCCCACCCATCCCTCTTCCCCCAGATTTCCCACGAACACC
AAACACAACCGCGCCTCTCGCACCCCCCTCCCACCCAATATTATCGCACT
CCCTGAGGGAGGGGTGTGTACGGGCGGAAAATGTGTGGGCATGGGGGGTA
GGGGGTAGACCCGCCTAAAATCACCGCACAAAACACATAAACACCAGCAG
AAAAGCACATGACTACCCCTACCGCCGGCGATGGTCACCCTGAACAACTA
GAGTTGCGGTGTCCTGTCACGTTTCGATTGCTAGTTTTTGTGTTTTGTTG
TTGTTTTTACTCTGTTTTTCGATTTTGTTTTGGCCGTTTTTGTTTCAGCG
TATGTCTGGTGCGTAGGTTGGGGTTAGTTGGTGCCTGCAGTTGCTGAGAT
CTAAATAAAAACATACGACCATATTCTAAATAATATTTAACATTTGCTGC
TGTTGTCAGTTCAGCTAGCTGCTGTTTTTTTTGTTTTAGACCTAGCTGGA
CCGACGGAAGATGACAAGTAGTCTCGTGTACACTTCGTACGTGTATTTGC
AAGCGGGAGGGTACTGGAAACACCAGGGCAACAACTCTGTGTACCAGAGT
TCATGTGTCCCCGTCTTCTCGCCACCACGCCACGGCATTAGCTCTCCCAT
CCCATCACACTTACCGTCCCACCCGTTACCATCCCATTCCATCACGCGAA
GCCAACATTTACCATCCCATCCCATCAGCACCCTTCTCTTATACCATCCC
ATCCCATCACGTCATGAACGATTCCATCCCATCCCATCCCATCGTAGTAC
CATCAAAGTTGGCGTAAATACCATCCCATCTGACCTGATGGGAACCCTAA
ACAGTTTTTCGCCTGCGGAGGGCTGACCACCCCGGGTGGTACGTGGCGCC
TGACCACCCTGCCTTTTTTTAATTAAAAAATTTCATAATTTTTGTAATTT
TCGAAGTTTTTTTTTTCCTTCCTTGCTTCCGTCCTTCCTCCATTCCCTTC
CTTCTTGGTTTGCTGAGCTTATTTATTTATTTATTTATTTATTTTCCGTA
AGCTTTCCCCGTATCCTCTGCTCTGCTCGTAAACCGTGCCCCGCGTATTC
CTCTCGAGCCGTGTACTGCTGTACTGGGCATGCTGTAGTAGCCAATCATA
TGTCTCACCACACGTTCATTTTTGTGTTAACGTATTGGTGTGTTTGTGTG
TGTTTTTGGGGGGGTGCACTGCTGTCGTGCCGTGTGTTGACAGGTGGTAT
CGACGGCATGGGACTGCCAGCCGCGATGCAACTCCCAGGGATGGCGGCCT
TCATGGCGCAGCGGTCCACCGCCGCCGCCGTGCCCGGAGCGCCGGGGTCA
GGAGTGGCGGCGGAACAGCTCAAGGCCGCCATGATGTGAGAGACACCTTC
GTCTTTGCCTTTTCCGTGTTGGTTATTTGCGATTATGTGATGTATTCGAA
GTTAAAAGAGCCCACATATTCATCTTCCTCTCTGGTAGAGTGACTTGAGG
CACTCATCAACAAGCCACACCACGAAGGTTACATTAGGCCCTGTATTAAC
GAAAGTCGGAAAATCATTATTGAAATAAATCGGTCATAAATGGTCTCTGA
TTGGCCAAGCTCCTATTGCCTCCCGACGACGCCAATGATTTTTGGACATC
GCCGGCAGACGAAGAAAGCCGAAAATACTTACTTGCCAGAAAATCATTAT
GTTCGGGGTCTAAACCCGGTCGAGGGCTTTCTGGACGATGTGCCTCGCGC
ACCATCGACAGGCGGACAGGCAGGCCAGACCAAGTACCACCCGAGCAACC
AACAGCAGTGCCACAGAACATGACGTAGAGGTGTTGCACCACAGGCAAGC
CAACGCCAGCACCACATGACAGCGCAACAGACAAATACAGCAGCTTGCAT
GATGACGACCCATTACGCACACTACACACGCCACAGGCAGCTCACGAGGC
TGCCTCTCACAGCCCATGGCAGACAGACGTATGATACATCAGTCAGCCTT
GAGTGCATGAGCCAACACACACCGCACACGTATACAAACGGGGTGCCTCT
TGGCAGGCAGGCTTGGTGCACAGAGCCCACGAACTTGCCTCTTCGCATGC
GAGAGTACGCATATGATTTGTCGAAGTACTACTGTTATGCTGTACGAAGT
ACTTCGTACAGCAGAATACTCTGTTTTACCCATCGTGTCGTCGACATCAG
AGATTTGCACCCTGCCGGCGTGTACCGGCCTTCAAACAGCTTTGAAAGCT
TTTTCGTTAATATGGCTCGAAGGGTTTTTCTGAAAATCATACGTGAAATG
ATAATAATCCCAATAATGATTTTCCGACGTTCGTTGATACAGGGCCTTAT
CGAAGTAAAGACTACACATACGTCCATCTCTGGTCGGGTGATTTGAGGCA
CTTGCGTACATGCGACACGAGTGTTTGTCGTTGTCTCACCGGTGGTGTTT
GCAAGGACCACCTGCGTCTTTGCGTCTGCAATACCAACGAACCCAAACTA
CGCACCCGTCGTTGATGATACAGTGCCAACAACCCCCTAATGCCATGTCA
AGTGTGCAAACCCCACAAGCATACCCCATCCTAGGCTGCGACACGGACAG
TCGCCGATCCACCCTTACTTCGTCCGAAAATAGCCCACAAAACATGCCTC
ATGGAAGTCTGCAACTCGGACGAATATGCATCGCAGGAATGCCGCCCCTG
CCCAGACTAAGATCTACGTCGGAAACGTGGAGCCGCACATCACGACGGAG
ATGATAAAGACTGTATTCGAGCCCTTCGGCATGGTGGTTGGCGCGGAGAT
GGTGGTCGACCCCAACAACCCCGGGCACGTGAGAAGCCATGCATGATAGA
TACTGTCTCTCGTGTCTCTTCGGTCGTTGCACATGGCCATCTTGTCCTCG
AAAAGTTGTCGTACCATACTGTCGTGTTTGAGCATTGATGTGGAAGTGTT
GTTGTCGTCTGTTGTAAGCCGCTCGCGCTTGGGTGTACCCGCCCTTGTTG
ACTCCGATAGAAGTGTTGTGGTCTGACGTGGGGATGATCCCTACGGGGCT
ACCAGGTACCAAGTGCGCAGACGGTAGCGCTGTGCAGAGTCATGGGAGAG
TCGACACACGTAACCCCCCGTAACCCCCCCCCCCCCCCACCCTCCCATCT
CTCAGTCGTTCGTTTGTTCGTTCGATCATACGAAGAATGACGGTCGCACT
TGCAGTGTCGAAGTGAAATACTTGTTCCCCGCCTCGCGTTTTGTGGTACG
CAGCAAGCGATGTGGTACGCAGTAAGCGACGTGGTACGCAGCAAGCGACG
TGGTACGCAGCAAGTGATGAAGGAGGCAGGGCATCGAGACCAATCACCAG
TCACATCGTACATATGCACGCATAAACCCTTTCCATCCCTTGTGTGGAAA
TAACAATTCGTCTCCTTTAAACGCGACGCACACCTCAGTTTTTTTTTTGT
GTTTGGCTCGGTGCTTGGTGTTTCCCTCACCCCCCCCTCCCCCCCCGCCT
TTGATGGCTTCTTCCAGCACAAGGGTTTCGGGTTCGTCCAGTACGCCCAG
GAGACTGTGGCCAGAACCGTCATCGATGTGAGTGCCGTCCCCGTTCAGAA
CACTGATTGCTCCATTCGTTTGGCAGTCTCGCCTGCTTTGGTTTGGCTTG
GTTTGGCCGACCTGTTCGTTGTCGTGTTTCGCTCGCCCTGTTGTGCGATA
GAAAAAACATTGCGTGCCCTCTGCTGTGTAGGAATCGCTGAACGCGATGC
AAGTGGTGGCCACGTGAGTCGCGACGTCAAAGACGTGGTCCACGCTGCAC
TCGTACTTTTGTCGGAAGAGGTGCTGCATCTCATGCGATTTTTGCTCTGG
TGTTCGTCGATTTTACGAAAACAATTAGCACGATTATTACTTATTTGTTG
GCACGCTTCTTCACACATTTTCTCTCCTGGCAAAGGTCACTCCTCTACAG
TACAAGTAACAAGTTTTTCCAAAAGGCTTTGCCAAGCCGGCACCATCGCC
TAGCTGTTATTCATCTTTCCGGGGCATCAACGCCATGTCCCCAGCTATCG
CAGATACACAAGCACGACGGCAACAACCTACATACAGTAGCTCGTGAACG
GTACTTCCCCGTCGTCGAGAATATGGCACCTCGAAATATTACAATACTTT
CATGGTAGAAGAAAATATGGCAAGCCAACTCTCTGAACGTCCACAGTACC
TGTTGTGGTTACCGCCACCTCTTCCCGTCCCACGTCGCCACCTCTTCCTG
TGTCTCGAGATCACAAGGAACGAAACTTCAAACTAATAACGGGCAAAATA
AGGCAAAAAACATTCTCAAACGGTTGTCGCTTTTCCCCCCACGCATCTCG
CACTCCCCTCGTACTCCCCGCGGTTGTCGCCATGATATGTATGGCATCAT
GTCATCGCAAAACTTTCCCCCGCCCCCAGACTATGTCCAACTTCGAGCTC
GCCGGCAGGACGCTACGTGTGGCCTGGGCCCAAGACCAGTCGAAGCCGGC
CCTCTCCGTCCTCCCTCCGGGCCTCACCGCCGCAGGCGCCGCGGCACAAG
CGGCCGCCATGGCCGCGAAGGCCGCCGCGTCTGCCGCCGGAGGGGCCGCC
GCCGCCACCGCCGCCGCCCGCCTGACGGCCAGCCGTCTCCAGGGCTTCGG
CGGCGGTGGCGGTGCCGGCTTCGGCGGCGGTGGCGGTGGCGGTGCCGGCT
TCGGCAACGGCAGTGGTGCCGGCTTCGGCAACGGCGGCGGTGCCGGCTTC
GGCAACGGCGCTGGTGCCGGCTTCATCAACGGCGCTGGTGCCGGCAACGC
TGGCGGTGCCGGTGTGTGGGTGTCCGGGGGTAGCGCGGGGAGTGGCGGGG
CCGCGGCCCAGCAGGCGCAGGCGATCGCGGCGGCGGCGCAGCAGAGGGCG
AGGATGAGCGCCGCCGCTGGAGTTCCTCGGGTTTCGAGATGCGTGTGTCT
GGTGGTGAGTTTGTCTGCGGGGGGAGGGGAGGTGTGGTGGTGGTTGTGTG
TGTGTGTGTTTTGATGTGTTTTTGTTTTGAGTAGTATCGGGCGTGTATGT
AGTCGGTGGCGTCAAGTGTAAAACCTACCGGTTCCTATTTTTTGCACCGC
TGTTAGACCTGTCTGCTGTGTCCTGCCATGGCGATTGATTGTTATTTCTT
TCATCATAATTCTGGCTCGTGCCGTACCGAAAGTTGCTGACGCCTGTCGC
ACTACAGAAAGCTCACGCCTTGTTTTTTTCCGCTGTGTCCGGCACAATGA
CATTGTATGACATGAAACAATAGAACATGCTGGGACCGGAGGACGCTGAC
GACCAAGAGACAAAGGCGGAGATTCTAGAGGAGTTCGGGACCTGCGGCAC
AGTGTTGCAGGTGTGTACCATACCACATATTGGTGCAATGTGCAATGACG
CGGTGTGTACGACGGGTGTGACCGCGTCAAAGACCCAGATGTACGGACGG
TGCTACCGGCGTATGATGGCGCCAATGAGATCCGGTAGATGTTGTCGTGG
TGCTGCCTGAGATGGCGCGCCGGCGTGTTCGTGCCATGTTGTATTTAGAG
GATGTTTCCACTCCCACAGCCAACCACGAGCACCACCCCCCCTTAGACCA
CCGGCACTTAACCGACCCCCCCCCCCTGTCTCATTTGCGGCACCCTGGTT
TCGTGATATTCGTCTTGTTCGTAAGCTCCACGTGCACAAGCAACGGGCCT
CTGGCGGTACGGTGGTGGCCGTTCGGGTGTTCGTTGTGTACGCCGACCCG
AACGGGGCCGCGTTAGCAATCCGGAAAATGCATGGAAGGTTCTTCGCGGG
TCGACAAGTGCAAGCGGTGGCGTACGACGAAGGCTTATTTTCTCAAGGCT
CTCTCGACAGTTGATGTATATTACGTGTTCTTGTATAATAATATCACATG
ATGCCAGTGCGGTATGTATTAATTTTTTTTCCGGTGGGTGGGTATGGGAG
GCACAGGCTGCAGTGTTGCCTTAAGACTCGATTTTGGTGTCATATGGAAA
GAAATACTTGTACTTGAAACTTGGCAAGTCCCAACCGGTGTATTAGATGT
GCGGGCGGGACGGGCAGGGCGCGGGGAAAGGGGGGGGGGGGAGGAGGCAG
CGGTATCAGTGACGGGACGTGCCCCAAAAAATTCAAAAATTCTAGACGCA
TGGTTTTTTATGTTCACGCGATGAAGTGCCCAGTGGTGACCAAGGAAGTC
AAGAAGTGGTGCATGGTTTCCCAAAGGCAGTTCGCCGGTTAGTGCGTTGG
AGAAGGGCCTGGGAGGGCCGTTGAATGCGACGCCGGCGCCGGAGTTGTTT
CTGGAGATGGTGGAAGGTTCACTTGTTTGTCGCTGCCGTTGTCTTTGAAC
ACTTGAAGAAGCTCTTGTTTTCGATGACGATTAAGATAGGTGTCATATTT
CACCCCACACAAGAACGCGAAGATATGCGAATGAGCTCTTCTTCTGTTTT
CGATAAATATTAACGTGAGTGTCGTATTTCGCCGTATACAACAACGCATA
GATGTACGTGGCCGTTCACGCGCTTCTCATGCCCGGGTCATATTGGATTG
TTGTACAAGCACAGGGAGTGTTCCTGCATGTGCGTTATCGTGGCTCGTCA
ATCCTATATGATATACGTTGTATACATGCGGAGTTTGTACGATTCGCACG
CTGAGGAGAAAATGATCTGTGTGATGCCGTATGACTGGCACGGAGAAAAT
CGTGATTGCCTGCGGGAGAGGGGGGTGGTGCTTTGCGGGCGTATCAACTA
CAGCAACGAAACACACCAATTTGTTGACCGTTATTTCGGGGAAACTTTTT
TTACAGATTGTTGACTGATTTTTGGGTTTTCAAAAACATCGAGATATATC
GGCCTGACTTTCCGATTACCACATCGATTTAAATCGGAAAAATTTACTGC
GTGAATCGGCAGTGTTTCACAGCCCTGATAACAGTACTCATG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig97:200327..214568+ >mRNA_P-littoralis_Contig97.24.6 ID=mRNA_P-littoralis_Contig97.24.6|Name=mRNA_P-littoralis_Contig97.24.6|organism=Pylaiella littoralis U1_48|type=CDS|length=2277bp|location=Sequence derived from alignment at P-littoralis_Contig97:200327..214568+ (Pylaiella littoralis U1_48)
ATGAGTGACGCTATGGAAGTGACCACAGACCCTCCCGCCTCCGATTCACT
GGAAGCTGCTGCTGCTGCGAATCTGACAAACGAGTCTGCTGACCAAGACG
ACGGTGGTGCTGAAGTCGATATTTCGAAGCCCCCCGCCTCCAACACCGCA
AGCGACGCTGCTGACAACGGAGCCGTTGCCTCGGCTGCGGTCGCCTCTGC
TACTACTGCTACCGCAGATCCTCCTCCAGAAACCCCCTCTCCGATCGAAA
CCCAAGCTCCCGCTACTGCCGCTGATGCAGCAGCATCCTCTCCCAAAGAA
GGTGTCGAAGGCAAGACCGAAGATGTCTCTCCTCCTCAGGCGACAGACAC
ACCCGCCGAGGCCCCCCCTCCTCAGACGACAGCAGACACGGCGGACCCGG
CCACCGCCGAGGGCGAGAAGGAGAGCCCCGAGGACGTTGAAGCTATGGCT
GCGGCGGCAATCAGGGCGGCAGCACAAGCGGCAGCCGCAGGCGGCGGTGG
AGCAGCAGCAGCAGCAGCAGCAGGAAATAAGGAGGACGGCGCTGCTGGTA
CGGAGCAGCCGAAGAAGAAGCGCACGAGGCGAGGAGGATGGGATACCCCT
TCCGCTGCTCCCGCGGCTGGTGGCGCGGTGAAGAGGGGGTGGGGGGACGC
GCCCAAGCCCGTGGTGGCGCCTGTGGTTCCCGCAATGACCCCGTTGCAGG
AGCTGCAGCGCAAGCTTGCCGAGGAGCAGGTGGCAGCCGCGATGGGCCAA
GCTCCATCGGTAACCTCGGTGGCGGCAGGAGCCGCTGCGATGGGGCTCAC
CATGGGAGGCATGCTGCCTGGCGCGGGGGCAGGGGGCATGCCGCAGAATG
CTCCTGTCGTGCAGCGCCCCAACCCGAGGCGCCTGTACATCGGCTCTCTC
CACTACGAGCTCAAGGAGAGCGACATCACAGCAATATTTGCTAACTTTGG
GCCTCTGAAGCTCGTGGACATGTCGCACGATAAGACCACCGGTCGCCACA
AGGGCTTCTGCTTCATCGAGTATGCAGACGTCAGGGGAGCAGACGCAGCA
CTGAGGGCCATGAATGGATTCGAGCTCGCGGGCCGCGCCATCAAAGTTGG
GCGACCGTACAACACTGAATCAGGCATCTCAGGTGGTATCGACGGCATGG
GACTGCCAGCCGCGATGCAACTCCCAGGGATGGCGGCCTTCATGGCGCAG
CGGTCCACCGCCGCCGCCGTGCCCGGAGCGCCGGGGTCAGGAGTGGCGGC
GGAACAGCTCAAGGCCGCCATGATGAATGCCGCCCCTGCCCAGACTAAGA
TCTACGTCGGAAACGTGGAGCCGCACATCACGACGGAGATGATAAAGACT
GTATTCGAGCCCTTCGGCATGGTGGTTGGCGCGGAGATGGTGGTCGACCC
CAACAACCCCGGGCACCACAAGGGTTTCGGGTTCGTCCAGTACGCCCAGG
AGACTGTGGCCAGAACCGTCATCGATACTATGTCCAACTTCGAGCTCGCC
GGCAGGACGCTACGTGTGGCCTGGGCCCAAGACCAGTCGAAGCCGGCCCT
CTCCGTCCTCCCTCCGGGCCTCACCGCCGCAGGCGCCGCGGCACAAGCGG
CCGCCATGGCCGCGAAGGCCGCCGCGTCTGCCGCCGGAGGGGCCGCCGCC
GCCACCGCCGCCGCCCGCCTGACGGCCAGCCGTCTCCAGGGCTTCGGCGG
CGGTGGCGGTGCCGGCTTCGGCGGCGGTGGCGGTGGCGGTGCCGGCTTCG
GCAACGGCAGTGGTGCCGGCTTCGGCAACGGCGGCGGTGCCGGCTTCGGC
AACGGCGCTGGTGCCGGCTTCATCAACGGCGCTGGTGCCGGCAACGCTGG
CGGTGCCGGTGTGTGGGTGTCCGGGGGTAGCGCGGGGAGTGGCGGGGCCG
CGGCCCAGCAGGCGCAGGCGATCGCGGCGGCGGCGCAGCAGAGGGCGAGG
ATGAGCGCCGCCGCTGGAGTTCCTCGGGTTTCGAGATGCGTGTGTCTGGT
GAACATGCTGGGACCGGAGGACGCTGACGACCAAGAGACAAAGGCGGAGA
TTCTAGAGGAGTTCGGGACCTGCGGCACAGTGTTGCAGCTCCACGTGCAC
AAGCAACGGGCCTCTGGCGGTACGGTGGTGGCCGTTCGGGTGTTCGTTGT
GTACGCCGACCCGAACGGGGCCGCGTTAGCAATCCGGAAAATGCATGGAA
GGTTCTTCGCGGGTCGACAAGTGCAAGCGGTGGCGTACGACGAAGGCTTA
TTTTCTCAAGGCTCTCTCGACAGTTGA back to top
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