prot_P-littoralis_Contig867.4.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig867.4.1
Unique Nameprot_P-littoralis_Contig867.4.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length111
Homology
BLAST of mRNA_P-littoralis_Contig867.4.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 2.010e-32
Identity = 66/92 (71.74%), Postives = 72/92 (78.26%), Query Frame = 0
Query:    1 LEFDKDTVRRWFKELGAAKKARRIKPSLSDAQKRRRIDYICDQVDETTGEYLDQYNVVHLDESWFYLMKEKDKVPSVPRRGSPGGPPRSAQE 92
            LEF KDTVRRWF +LGAAKKA RIKPSLSDAQKR R+D+I D+VDE  GEYLDQ NVVHLDESWFYLM+EK+KV        PG PPR   E
Sbjct:   98 LEFGKDTVRRWFSKLGAAKKAGRIKPSLSDAQKRHRMDFISDRVDEPIGEYLDQGNVVHLDESWFYLMREKEKVRVFSGEDVPG-PPRVPHE 188          
BLAST of mRNA_P-littoralis_Contig867.4.1 vs. uniprot
Match: A0A7G2DX18_ARATH ((thale cress) hypothetical protein n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=A0A7G2DX18_ARATH)

HSP 1 Score: 55.1 bits (131), Expect = 1.750e-6
Identity = 27/76 (35.53%), Postives = 43/76 (56.58%), Query Frame = 0
Query:    1 LEFDKDTVRRWFKELGAAKKARRIKPSLSDAQKRRRIDYICDQVDETT----GEYLDQYNVVHLDESWFYLMKEKD 72
            L+  K T+ R  KE    + +  IKP L +  K+ R+ +    VD  +     +++D YNVVH+DE WFY+ K+K+
Sbjct:   97 LDVSKSTMHRRIKEGNLKRHSNAIKPRLKEDNKKARLQFCLSMVDRCSLPNLPKFVDMYNVVHIDEKWFYMTKKKE 172          
BLAST of mRNA_P-littoralis_Contig867.4.1 vs. uniprot
Match: UPI000B8B257F (uncharacterized protein LOC110790000 n=1 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8B257F)

HSP 1 Score: 54.7 bits (130), Expect = 2.400e-6
Identity = 29/79 (36.71%), Postives = 45/79 (56.96%), Query Frame = 0
Query:    1 LEFDKDTVRRWFKELGAAKK-ARRIKPSLSDAQKRRRIDYICDQVDETTGEYLDQYNVVHLDESWFYLMKEKDKVPSVP 78
            L+  K TV RW K LG  K  +  +KPSL++   + R+ +    +D+ TG +   YN++HLDE WFY+ K   +   +P
Sbjct:  108 LKISKTTVYRW-KSLGLIKPHSNAMKPSLTNGNLKERLKWRLGALDQNTGGFNHMYNIIHLDEKWFYMTKGTQRYYLLP 185          
BLAST of mRNA_P-littoralis_Contig867.4.1 vs. uniprot
Match: UPI0007F012D1 (uncharacterized protein LOC108203813 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F012D1)

HSP 1 Score: 53.1 bits (126), Expect = 8.060e-6
Identity = 26/73 (35.62%), Postives = 40/73 (54.79%), Query Frame = 0
Query:    1 LEFDKDTVRRWFKELGAAKKARRIKPSLSDAQKRRRIDYICDQVDETTGEYLDQYNVVHLDESWFYLMKEKDK 73
            +   K TV R  +E         +KP+L++  KR R+++   Q+D  T  + D +NVVH+DE WFY+ K   K
Sbjct:   46 ISVSKTTVHRRVQEGLIRPHTNAVKPTLTEDNKRTRLEFCLSQIDPDTLLFSDMFNVVHIDEKWFYMCKTTTK 118          
BLAST of mRNA_P-littoralis_Contig867.4.1 vs. uniprot
Match: A0A6D2IQQ5_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2IQQ5_9BRAS)

HSP 1 Score: 52.8 bits (125), Expect = 1.050e-5
Identity = 26/81 (32.10%), Postives = 46/81 (56.79%), Query Frame = 0
Query:    7 TVRRWFKELGAAKKARRIKPSLSDAQKRRRIDYICDQVDETT----GEYLDQYNVVHLDESWFYLMKEKDKVPSVPRRGSP 83
            T++R  KE    +    IKPSL++    +R+++    +D+ T     +++D YN+VH+DE WFY+ K+ +K   +P    P
Sbjct:  115 TLQRRVKEGLLRRHTNAIKPSLTEENTMKRLEFCLSMLDKDTLFHEPKFVDMYNIVHIDEKWFYMTKKMEKYYLLPEEEDP 195          
BLAST of mRNA_P-littoralis_Contig867.4.1 vs. uniprot
Match: UPI000CD8BE7B (uncharacterized protein LOC111908693 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD8BE7B)

HSP 1 Score: 52.8 bits (125), Expect = 1.130e-5
Identity = 28/88 (31.82%), Postives = 43/88 (48.86%), Query Frame = 0
Query:    1 LEFDKDTVRRWFKELGAAKKARRIKPSLSDAQKRRRIDYICDQVDETT-----GEYLDQYNVVHLDESWFYLMKEKDKVPSVPRRGSP 83
            L   K T+ RW KE         IKP+L+   KR R+++   ++  ++       + D +NVVH+DE WFY+ K   +   VP    P
Sbjct:  110 LNVSKSTMHRWIKEGVLRPHTNAIKPTLTHENKRARLEFCLSKITLSSLFSPLPTFYDMFNVVHIDEKWFYMSKPSKRYYLVPGEDEP 197          
BLAST of mRNA_P-littoralis_Contig867.4.1 vs. uniprot
Match: A0A6D2J0F6_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2J0F6_9BRAS)

HSP 1 Score: 52.8 bits (125), Expect = 1.180e-5
Identity = 26/81 (32.10%), Postives = 46/81 (56.79%), Query Frame = 0
Query:    7 TVRRWFKELGAAKKARRIKPSLSDAQKRRRIDYICDQVDETT----GEYLDQYNVVHLDESWFYLMKEKDKVPSVPRRGSP 83
            T++R  KE    +    IKPSL++    +R+++    +D+ T     +++D YN+VH+DE WFY+ K+ +K   +P    P
Sbjct:  264 TLQRRVKEGLLRRHTNAIKPSLTEENTMKRLEFCLSMLDKDTLFHEPKFVDMYNIVHIDEKWFYMTKKMEKYYLLPEEEDP 344          
BLAST of mRNA_P-littoralis_Contig867.4.1 vs. uniprot
Match: A0A1R3G1A7_9ROSI (Transposase, Tc1-like protein n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3G1A7_9ROSI)

HSP 1 Score: 52.4 bits (124), Expect = 1.530e-5
Identity = 29/87 (33.33%), Postives = 43/87 (49.43%), Query Frame = 0
Query:    1 LEFDKDTVRRWFKELGAAKKARRIKPSLSDAQKRRRIDYICDQVDETTGE----YLDQYNVVHLDESWFYLMKEKDKVPSVPRRGSP 83
            +   K T+ R FK  G  + +  IKP L D  KR R+ +    ++E +      +   YNV+H+DE WFYL K+  K   +P    P
Sbjct:  114 INMSKTTLFRIFKAGGFRRHSSSIKPLLKDGNKRTRLQFCLSMLEERSLPHEPIFQGMYNVIHIDEKWFYLTKQSQKYYLLPDEEDP 200          
BLAST of mRNA_P-littoralis_Contig867.4.1 vs. uniprot
Match: UPI000CD9BE6A (uncharacterized protein LOC111905831 n=2 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD9BE6A)

HSP 1 Score: 52.0 bits (123), Expect = 2.100e-5
Identity = 27/83 (32.53%), Postives = 43/83 (51.81%), Query Frame = 0
Query:    5 KDTVRRWFKELGAAKKARRIKPSLSDAQKRRRIDY----ICDQVDETTGEYLDQYNVVHLDESWFYLMKEKDKVPSVPRRGSP 83
            K T+ R  KE     +   IKP L+DA K +R+++    I   + E+   + D +NV+H+DE WFY+ +   +   VP    P
Sbjct:  114 KSTLHRRIKEGDLRPRTNAIKPDLTDANKTKRLEFCLSMITRSLPESNTTFHDMFNVIHIDEKWFYISRSSKRYYLVPGEDEP 196          
BLAST of mRNA_P-littoralis_Contig867.4.1 vs. uniprot
Match: UPI00053B897F (uncharacterized protein LOC104789346 n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI00053B897F)

HSP 1 Score: 51.2 bits (121), Expect = 2.360e-5
Identity = 27/87 (31.03%), Postives = 45/87 (51.72%), Query Frame = 0
Query:    1 LEFDKDTVRRWFKELGAAKKARRIKPSLSDAQKRRRIDYICDQVDE----TTGEYLDQYNVVHLDESWFYLMKEKDKVPSVPRRGSP 83
            L+    T+ R+ KE    + +  IKP L ++  R R+++    +D        +++D YNVVH+DE WFY+ K K+    +P    P
Sbjct:    5 LKMSHTTLARYVKEGLIRRHSNAIKPRLRESNMRARLEFCVSMLDSRFMPNHPKFVDMYNVVHIDEKWFYMTKPKETYYLLPTEEEP 91          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig867.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5JIM0_9PHAE2.010e-3271.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7G2DX18_ARATH1.750e-635.53(thale cress) hypothetical protein n=1 Tax=Arabido... [more]
UPI000B8B257F2.400e-636.71uncharacterized protein LOC110790000 n=1 Tax=Spina... [more]
UPI0007F012D18.060e-635.62uncharacterized protein LOC108203813 n=1 Tax=Daucu... [more]
A0A6D2IQQ5_9BRAS1.050e-532.10Uncharacterized protein n=1 Tax=Microthlaspi errat... [more]
UPI000CD8BE7B1.130e-531.82uncharacterized protein LOC111908693 n=1 Tax=Lactu... [more]
A0A6D2J0F6_9BRAS1.180e-532.10Uncharacterized protein n=1 Tax=Microthlaspi errat... [more]
A0A1R3G1A7_9ROSI1.530e-533.33Transposase, Tc1-like protein n=1 Tax=Corchorus ol... [more]
UPI000CD9BE6A2.100e-532.53uncharacterized protein LOC111905831 n=2 Tax=Lactu... [more]
UPI00053B897F2.360e-531.03uncharacterized protein LOC104789346 n=1 Tax=Camel... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 16..101
e-value: 1.3E-6
score: 30.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig867contigP-littoralis_Contig867:48814..49146 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig867.4.1mRNA_P-littoralis_Contig867.4.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig867 48240..49146 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig867.4.1 ID=prot_P-littoralis_Contig867.4.1|Name=mRNA_P-littoralis_Contig867.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=111bp
LEFDKDTVRRWFKELGAAKKARRIKPSLSDAQKRRRIDYICDQVDETTGE
YLDQYNVVHLDESWFYLMKEKDKVPSVPRRGSPGGPPRSAQEPPSEDHDH
CGKRSSGPCP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf