mRNA_P-littoralis_Contig867.4.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig867.4.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 238 bits (607), Expect = 2.010e-73 Identity = 128/199 (64.32%), Postives = 136/199 (68.34%), Query Frame = 2
Query: 206 RRKIKFRVFPDEEVPGAPRVQHKSHLPKIMIIVANARADPAHDFDGKIGIW*ICVIKTAQRSSKR-------------------RKRG----EEYEFDVTIDAEWYKDWYIDELLPAIKKNMPW*RSKRVVVQQDGASPHT-------------------ELVTQPA*SPDNNINDLGFFASLKSRVWAMNACSVDELV 676
R K K RVF E+VPG PRV H+SHLPKIM+IVANAR DPAHDFDGKIGIW ICVI+TAQRSSK+ R R EEYEFD TIDAEWYKDWYID LLPAIK+ MPW RSKRVVVQQDGASPHT ELVTQPA SPD NINDLG FASLK RVW +NA S+DELV
Sbjct: 166 REKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLKPRVWGVNAFSIDELV 364
BLAST of mRNA_P-littoralis_Contig867.4.1 vs. uniprot
Match: A0A484KKG0_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484KKG0_9ASTE) HSP 1 Score: 117 bits (294), Expect = 6.720e-28 Identity = 79/233 (33.91%), Postives = 118/233 (50.64%), Query Frame = 2
Query: 212 KIKFRVFPDEEVPGAPRV-QHKSHLPKIMIIVANARA--DPAHD--FDGKIGIW*ICVIKTAQRSSKRRKRGE-EYEFDVTIDAEWYKDWYIDELLPAIKKNMPW*RSKRVVVQQDGASPHT------------------ELVTQPA*SPDNNINDLGFFASLKSRVWAMNACSVDELVESIYEQYEDYDGETLERVWQSLFKVYNQTLRNVGDNDFAVEHTGVRKRQREGTL 838
K RV+ E R + K+H+PK+M + A R P + +DGK+GIW + + AQR SK R G E + I E Y+ I ++LPAIK+ +P +K +++QQD A PH EL QP SPD NI DLGFFAS++S + +VDELV+ + + Y + + + L VW S + ++ G N++ + H G + +REG L
Sbjct: 3 KPSLRVYKTEREREPHRTAKSKAHIPKLMHLCAVGRPIFGPEGEVIWDGKVGIWPLTIQVPAQRRSKNRAAGTLETKPIPRITKEVYRTLMIQQVLPAIKEKVPEAITKHIIIQQDNAKPHIDVNDPEFVQVANADGYSIELTCQPPNSPDLNILDLGFFASIQSLQHQTSTRNVDELVQHVAQAYANLEAKKLNYVWISYQLAMTEIMKVQGGNNYKLAHIGKARLEREGAL 235
BLAST of mRNA_P-littoralis_Contig867.4.1 vs. uniprot
Match: A0A485KZK7_9STRA (Aste57867_13656 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KZK7_9STRA) HSP 1 Score: 118 bits (295), Expect = 7.680e-27 Identity = 74/212 (34.91%), Postives = 112/212 (52.83%), Query Frame = 2
Query: 272 KSHLPKIMIIVANARADPAHD------FDGKIGIW*ICVIKTAQRSSKRRKRGEEYEFDVTIDAEWYKDWYIDELLPAIKKNMPW*RSKRVVVQQDGASPHTELVT-----------------QPA*SPDNNINDLGFFASLKSRVWAMNACSVDELVESIYEQYEDYDGETLERVWQSLFKVYNQTLRNVGDNDFAVEHTGVRKRQREGTL 838
K +PK+M + A AR P HD FDGKIG+W I A R+S+ R G V ++A+ Y+D+ I++++PAIK+N P +RVV+QQD A+PH + QP SPD N+ DLGFFAS+++ + + +VD+++++ + LE V+ +L V L N GDN F + H ++R GTL
Sbjct: 215 KRFIPKVMFLAAVAR--PRHDDARNAPFDGKIGMWPIVKSAPAARNSRNRPAGTMVTTLVNVNADVYQDYVINKVIPAIKENFPS-AHRRVVLQQDNATPHRSISDASLASVSTDGWTFVVRRQPPNSPDLNVLDLGFFASIQALQYKSVSRTVDDVIQATMTAFVTLSSVKLEDVFLTLQAVMRLVLENDGDNHFRLPHLNKSAKRRSGTL 423
BLAST of mRNA_P-littoralis_Contig867.4.1 vs. uniprot
Match: B9FLL3_ORYSJ (Uncharacterized protein n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=B9FLL3_ORYSJ) HSP 1 Score: 119 bits (298), Expect = 7.710e-27 Identity = 75/221 (33.94%), Postives = 116/221 (52.49%), Query Frame = 2
Query: 263 VQHKSHLPKIMIIVANARADPAHD------FDGKIGIW*ICVIKTAQRSSKRRKRGEEYEFDVTIDAEWYKDWYIDELLPAIKKNMPW*RSKRVV-VQQDGASPHT------------------ELVTQPA*SPDNNINDLGFFASLKSRVWAMNACSVDELVESIYEQYEDYDGETLERVWQSLFKVYNQTLRNVGDNDFAVEHTGVRKRQREGTLEKVV 850
VQ+K+ + K+M + A AR P D FDGKIGIW + AQRSS+ R+RG + +D + K + I ++LPAI+ P ++R + +QQD A H LV QP SPD N DLGFFASL+S + +++EL+E+++++Y DY+ TL RV+ +L Y + ++ G N + + H + + G L K +
Sbjct: 310 VQNKNAIEKVMFLSAVAR--PRFDDEGNCTFDGKIGIWPFVRKEPAQRSSRNRERGTLVTKTIKVDRDTMKSFMISKVLPAIRACWPQEDARRTIFIQQDNARTHVPIDDEQFGVAVGQMGLDIRLVNQPPNSPDMNCLDLGFFASLQSLTSTRVSSNMEELIENVHKEYNDYNPNTLNRVFVTLQSCYIEVMKASGGNKYKIPHMNKERLEALGILPKAL 528
BLAST of mRNA_P-littoralis_Contig867.4.1 vs. uniprot
Match: A0A485KM04_9STRA (Aste57867_9103 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KM04_9STRA) HSP 1 Score: 114 bits (284), Expect = 2.280e-26 Identity = 67/194 (34.54%), Postives = 103/194 (53.09%), Query Frame = 2
Query: 272 KSHLPKIMIIVANARADPAHDFDGKIGIW*ICVIKTAQRSSKRRKRGEEYEFDVTIDAEWYKDWYIDELLPAIKKNMPW*RSKRVVVQQDGASPHTELVT-----------------QPA*SPDNNINDLGFFASLKSRVWAMNACSVDELVESIYEQYEDYDGETLERVWQSLFKVYNQTLRNVGDNDFAVEH 802
K + K+M + A AR F+GKIG+W + A R S+ R G V ++A Y+D+ +++++PAIK N P +KRV++QQD A+PH + QP SPD N+ DLGFFAS+++ + M + +VD+++ S +E D ETL V+ +L V L + GDN F + H
Sbjct: 63 KRFVSKVMFLCAVARPRKNEGFNGKIGMWPFVEQRPAVRISRNRPAGTMVTSLVNVNANTYRDYVLNKVVPAIKANFPT-SNKRVILQQDNATPHRSIDDASLARVSTDGWTFVVRRQPPNSPDLNVLDLGFFASIQTLQYKMVSRTVDDVIASTLAAFESLDSETLWNVFLTLQAVMRLVLEHSGDNHFKLPH 255
BLAST of mRNA_P-littoralis_Contig867.4.1 vs. uniprot
Match: A0A6G0WUD8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WUD8_9STRA) HSP 1 Score: 116 bits (291), Expect = 2.490e-26 Identity = 72/214 (33.64%), Postives = 115/214 (53.74%), Query Frame = 2
Query: 218 KFRVFPDEEVPGAPR-VQHKSHLPKIMIIVANARADPAHDFDGKIGIW*ICVIKTAQRSSKRRKRGEEYEFDVTIDAEWYKDWYIDELLPAIKKNMPW*RSKR--VVVQQDGASPHT------------------ELVTQPA*SPDNNINDLGFFASLKSRVWAMNACSVDELVESIYEQYEDYDGETLERVWQSLFKVYNQTLRNVGDNDFAV 796
KF ++ DE + PR VQ+KSH+ K+M +VA AR P D+DGK+G W QR+SK R+ GE V++ Y+++ D +LPAIK W ++ + VQQD A H+ E+ QPA SPD N+ DLGFF S+++ + +++EL++++ + D + TLE+ +++L +V + GDN F +
Sbjct: 176 KFLLWHDEAM--VPRHVQNKSHITKVMFLVAVAR--PRGDWDGKVGCWPFVTKVQGQRTSKNRRAGELVLTPVSVTGAIYREYLCDLVLPAIKNKWVWPSNEHGTIFVQQDNAPAHSRLDDAEILAACNSDGWNIEMRFQPAKSPDLNVLDLGFFNSIQALQQRLECGTIEELIDAVKISFHDLERLTLEKTFRTLHRVVQVIIEFKGDNRFKI 385
BLAST of mRNA_P-littoralis_Contig867.4.1 vs. uniprot
Match: A0A6G0X1B6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X1B6_9STRA) HSP 1 Score: 115 bits (287), Expect = 2.540e-26 Identity = 77/236 (32.63%), Postives = 117/236 (49.58%), Query Frame = 2
Query: 206 RRKIKFRVFPDEEVPGAPRVQHKSHLPKIMIIVANARA--DPAHD--FDGKIGIW*ICVIKTAQRSSKRRKRGEEYEFDVTIDAEWYKDWYIDELLPAIKKNMPW*RSKRVVVQQDGASPHTEL-----------------VTQPA*SPDNNINDLGFFASLKSRVWAMNACSVDELVESIYEQYEDYDGETLERVWQSLFKVYNQTLRNVGDNDFAVEHTGVRKRQREGTLEKVV 850
RRK+ +E P R + K +PK+M + A AR D A FDGKIG+W V A R S+ R G + AE Y+D+ +++++PA+K MP SK VV+Q D A+PH + QP SPD N+ DLGFFAS+++ + +++ SVD+++ + +E E L ++ +L V + + G N F + H G +R TL K V
Sbjct: 82 RRKV---YLTKDEAPEVRRCKSKRFIPKVMFLAAVARPRWDNARSCFFDGKIGMWPFVVQVPAARGSRNRPAGTMVTKVCNVTAEAYRDFVVNKVIPAVKSEMPS-TSKCVVLQHDNATPHRSVDDAVLSPCCTDGWTFRVSCQPPNSPDLNVLDLGFFASIQALQYKVSSRSVDDVIRATLIAFETLSSEKLSDIFLTLQAVMRLVIEHQGSNQFKLPHLGKNSIRRTRTLMKNV 313
BLAST of mRNA_P-littoralis_Contig867.4.1 vs. uniprot
Match: A0A6A4Z788_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z788_9STRA) HSP 1 Score: 117 bits (292), Expect = 5.660e-26 Identity = 79/227 (34.80%), Postives = 120/227 (52.86%), Query Frame = 2
Query: 227 VFPDEEVPGAPRVQHKSHLPKIMIIVANARADPAHD------FDGKIGIW*ICVIKTAQRSSKRRKRGEEYEFDVTIDAEWYKDWYIDELLPAIKKNMPW*RSKRVVVQQDGASPH-----TELVT------------QPA*SPDNNINDLGFFASLKSRVWAMNACSVDELVESIYEQYEDYDGETLERVWQSLFKVYNQTLRNVGDNDFAVEHTGVRKRQREGTL 838
+ PDE P + K +PK+M + A AR P D FDGK+G+W + A RSS+ R G V ++A+ Y+D+ I++++PAIK + P +KRV++QQD A+PH ELV+ QP SPD N+ DLGFFAS++S + +VDE+++ +++ E LE V+ + V L + GDN+FA+ H +R G L
Sbjct: 330 LLPDE-APQRRSWKSKRFIPKVMFLAAVAR--PRFDEGRGVLFDGKVGMWPFTSLVPAVRSSRNRPAGTLVTTLVNVNAQVYRDYVINKVVPAIKASFPS-TNKRVILQQDNATPHRSITDAELVSVSTDGWTFVVRRQPPNSPDLNVLDLGFFASIQSLQLKKVSRTVDEVIQYTLAAFDELSYEKLESVFLTFQAVMRLVLEHAGDNNFALPHLKKAALRRAGLL 552
BLAST of mRNA_P-littoralis_Contig867.4.1 vs. uniprot
Match: Q7G793_ORYSJ (Transposon protein, putative, Mariner sub-class n=4 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q7G793_ORYSJ) HSP 1 Score: 117 bits (292), Expect = 5.680e-26 Identity = 79/244 (32.38%), Postives = 124/244 (50.82%), Query Frame = 2
Query: 194 FTS*RRKIKFRVFPDEEVPGAPRVQHKSHLPKIMIIVANARADPAHD------FDGKIGIW*ICVIKTAQRSSKRRKRGEEYEFDVTIDAEWYKDWYIDELLPAIKKNMPW*RSKRVV-VQQDGASPHT------------------ELVTQPA*SPDNNINDLGFFASLKSRVWAMNACSVDELVESIYEQYEDYDGETLERVWQSLFKVYNQTLRNVGDNDFAVEHTGVRKRQREGTLEKVV 850
F + ++ F + P EE P P VQ+K+ + K+M + AR P +D FDGKIGIW + AQR S+ R+RG + +D + + + I ++LPAI+ P ++R + +QQD A H LV QP SPD N DLGFFASL+S + +++EL+E++ ++Y DYD +TL RV+ +L + + G N + + H + + G L K +
Sbjct: 309 FNATKKDRTFYLHPLEEEPYRP-VQNKNAIEKVMFLSTVAR--PRYDAEGNCTFDGKIGIWPFVRKEPAQRRSRNRERGTLVTKTIKVDRDTMRSFIISKVLPAIRACWPLEDARRTIFIQQDNARTHVPIDDEQFSVAVAQMGLDIRLVNQPPNSPDMNCLDLGFFASLQSLTANRVSKNMEELIENVQKEYNDYDPKTLNRVFVTLQSCCIEVMEANGGNKYKIPHMNKARLEALGILPKAL 549
BLAST of mRNA_P-littoralis_Contig867.4.1 vs. uniprot
Match: A0A6A4Z066_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z066_9STRA) HSP 1 Score: 112 bits (279), Expect = 8.080e-26 Identity = 71/206 (34.47%), Postives = 105/206 (50.97%), Query Frame = 2
Query: 272 KSHLPKIMIIVANARADPAHDFDGKIGIW*ICVIKTAQRSSKRRKRGEEYEFDVTIDAEWYKDWYIDELLPAIKKNMPW*RSKRVVVQQDGASPHTELVT-----------------QPA*SPDNNINDLGFFASLKSRVWAMNACSVDELVESIYEQYEDYDGETLERVWQSLFKVYNQTLRNVGDNDFAVEHTGVRKRQREGTL 838
K +PK+M + A R A FDGKIGIW A R+S+ R G V +D Y+D+ +++++PAIK+ P SKRVV+Q D A+PH + QP SPD N+ DLGFFAS++S + + + SVD+++ S ++ + E L V+ +L V L + G N F + H +R GTL
Sbjct: 37 KRFIPKVMFLCAVGRPRQADGFDGKIGIWPFVSKTPAVRNSRNRPAGTMVTTLVNVDGATYRDYVLNKVVPAIKEKFPS-VSKRVVLQHDNATPHRSIDDAALAQVSTDGWTFVVRRQPPNSPDLNVLDLGFFASIQSLQYKVVSRSVDDVIASTLMAFDMLNDEKLANVFLTLQAVMRLVLEHRGGNHFKLPHLHKDAMRRAGTL 241 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig867.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig867.4.1 >prot_P-littoralis_Contig867.4.1 ID=prot_P-littoralis_Contig867.4.1|Name=mRNA_P-littoralis_Contig867.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=111bp LEFDKDTVRRWFKELGAAKKARRIKPSLSDAQKRRRIDYICDQVDETTGEback to top mRNA from alignment at P-littoralis_Contig867:48240..49146- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig867.4.1 ID=mRNA_P-littoralis_Contig867.4.1|Name=mRNA_P-littoralis_Contig867.4.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=907bp|location=Sequence derived from alignment at P-littoralis_Contig867:48240..49146- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig867:48240..49146- >mRNA_P-littoralis_Contig867.4.1 ID=mRNA_P-littoralis_Contig867.4.1|Name=mRNA_P-littoralis_Contig867.4.1|organism=Pylaiella littoralis U1_48|type=CDS|length=333bp|location=Sequence derived from alignment at P-littoralis_Contig867:48240..49146- (Pylaiella littoralis U1_48)back to top |