prot_P-littoralis_Contig864.2.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig864.2.3
Unique Name	prot_P-littoralis_Contig864.2.3
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	650

Homology

[Close]

BLAST of mRNA_P-littoralis_Contig864.2.3 vs. uniprot
Match: A0A6H5JJA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA3_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 3.990e-12
Identity = 40/53 (75.47%), Postives = 43/53 (81.13%), Query Frame = 0

Query:  518 ILAPTAEKDLRETYKASDIERYTSVKAE--GPRVFGEVPESVKESLAAKEAAR 568
            ++  TA KD RETYKASDIERYTSV  E   PRVFGEVPESVKESLAAKE A+
Sbjct:    1 MVPATAIKDARETYKASDIERYTSVNPEDEAPRVFGEVPESVKESLAAKETAK 53

[Close]

BLAST of mRNA_P-littoralis_Contig864.2.3 vs. uniprot
Match: D7FZI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI6_ECTSI)

HSP 1 Score: 52.0 bits (123), Expect = 2.160e-5
Identity = 28/38 (73.68%), Postives = 29/38 (76.32%), Query Frame = 0

Query:  518 ILAPTAEKDLRETYKASDIERYTSVKAE--GPRVFGEV 553
            +L  TA KD RETYKASDIERYTSV  E   PRVFGEV
Sbjct:    1 MLPATAIKDARETYKASDIERYTSVNPEDEAPRVFGEV 38

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig864.2.3 vs. uniprot

BLAST of mRNA_P-littoralis_Contig864.2.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JJA3_9PHAE	3.990e-12	75.47	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FZI6_ECTSI	2.160e-5	73.68	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 446..476
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 599..613
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 574..649
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 373..389
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 266..281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..561
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 421..473
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 525..542
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 483..511
None	No IPR available	PANTHER	PTHR24126	ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED	coord: 34..172
None	No IPR available	PANTHER	PTHR24126:SF14	ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED	coord: 34..172
None	No IPR available	PROSITE	PS50297	ANK_REP_REGION	coord: 62..83 score: 9.595634
IPR002110	Ankyrin repeat	PRINTS	PR01415	ANKYRIN	coord: 156..170 score: 30.78 coord: 63..78 score: 43.04
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 96..126 e-value: 0.18 score: 20.9 coord: 28..57 e-value: 1500.0 score: 3.7 coord: 62..92 e-value: 1.6E-5 score: 34.4 coord: 131..169 e-value: 2300.0 score: 2.3
IPR002110	Ankyrin repeat	PFAM	PF12796	Ank_2	coord: 33..128 e-value: 5.9E-17 score: 62.0
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 96..129 score: 8.60279
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 62..95 score: 10.60604
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 29..187 e-value: 3.1E-31 score: 110.3
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 31..174

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig864	contig	P-littoralis_Contig864:9223..34056 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig864.2.3	mRNA_P-littoralis_Contig864.2.3	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig864 8783..34607 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig864.2.3 ID=prot_P-littoralis_Contig864.2.3|Name=mRNA_P-littoralis_Contig864.2.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=650bp
MVGAENGGGHARGDRGEAGGGGGYFFDGPPTSIMHAAYAGALEVVKSLVE
RGVPADGPDFIGGSTPLHWACYGGHLDVVRWLVGTAGADVNKANADGCTP
IFFACEKGYLGVAQWLVREAGAEVNVKDDVMWQTPLHRVFLLSRRTGAAG
TEVDDLIFWLVEAGADLTAVDRFGNRVEAVNMSSTGKPLTSTGSGSKLGG
VIAAAREEGLSDTQTRDKLKRRNAVRRKSGSDARAVVPQLSPRLEAKQRA
PLSRRGSRKDSAGGASGVFSPNNTQGFGGSRIGPSGSVAVPEATAVDEDD
KDGSDGGSGGGVAAPPAWAGSKMGGGPPAPVVVGEERGDAPLDSAEALAV
GTAATPGVENNVHARRSSNDYKRRTSGGAGEQEMQQQESLRVAEEALRKT
EVKDPTESAASSSARRRLEGAGTAVVDKIRELASDRRSGLISEEQFAEQK
RQLLEMEQLRRQAEEEAQRRELGQLEDAGAGILTSVGQNTPPPSPKNGSE
NGSQEGAGSAGGNPPTQILAPTAEKDLRETYKASDIERYTSVKAEGPRVF
GEVPESVKESLAAKEAARQEAAAAAAAAKKGDGSDKRLQGKKKSGSTLAK
MGGGTSTAGSAKGAGTGAGSAGDNGGPGQNGHEVDSANQSSGGCKCAIM*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002110	Ankyrin_rpt
IPR036770	Ankyrin_rpt-contain_sf