mRNA_P-littoralis_Contig864.2.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig864.2.3 vs. uniprot
Match: A0A6H5JJA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA3_9PHAE) HSP 1 Score: 74.3 bits (181), Expect = 6.300e-12 Identity = 40/53 (75.47%), Postives = 43/53 (81.13%), Query Frame = 3
Query: 1992 ILAPTAEKDLRETYKASDIERYTSVKAE--GPRVFGEVPESVKESLAAKEAAR 2144
++ TA KD RETYKASDIERYTSV E PRVFGEVPESVKESLAAKE A+
Sbjct: 1 MVPATAIKDARETYKASDIERYTSVNPEDEAPRVFGEVPESVKESLAAKETAK 53
BLAST of mRNA_P-littoralis_Contig864.2.3 vs. uniprot
Match: D7FZI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI6_ECTSI) HSP 1 Score: 52.0 bits (123), Expect = 3.250e-5 Identity = 28/38 (73.68%), Postives = 29/38 (76.32%), Query Frame = 3
Query: 1992 ILAPTAEKDLRETYKASDIERYTSVKAE--GPRVFGEV 2099
+L TA KD RETYKASDIERYTSV E PRVFGEV
Sbjct: 1 MLPATAIKDARETYKASDIERYTSVNPEDEAPRVFGEV 38 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig864.2.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig864.2.3 >prot_P-littoralis_Contig864.2.3 ID=prot_P-littoralis_Contig864.2.3|Name=mRNA_P-littoralis_Contig864.2.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=650bp MVGAENGGGHARGDRGEAGGGGGYFFDGPPTSIMHAAYAGALEVVKSLVEback to top mRNA from alignment at P-littoralis_Contig864:8783..34607+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig864.2.3 ID=mRNA_P-littoralis_Contig864.2.3|Name=mRNA_P-littoralis_Contig864.2.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=25825bp|location=Sequence derived from alignment at P-littoralis_Contig864:8783..34607+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig864:8783..34607+ >mRNA_P-littoralis_Contig864.2.3 ID=mRNA_P-littoralis_Contig864.2.3|Name=mRNA_P-littoralis_Contig864.2.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1950bp|location=Sequence derived from alignment at P-littoralis_Contig864:8783..34607+ (Pylaiella littoralis U1_48)back to top |