prot_P-littoralis_Contig86.55.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig86.55.1
Unique Nameprot_P-littoralis_Contig86.55.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length122
Homology
BLAST of mRNA_P-littoralis_Contig86.55.1 vs. uniprot
Match: D8LTL5_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTL5_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 6.370e-16
Identity = 49/77 (63.64%), Postives = 58/77 (75.32%), Query Frame = 0
Query:    2 ARARRWWWLCSRLAQKP-DLNVKFGAKSESALHVAAAQGAEAVATVL--AGADPNLRDGGERSPLHVAAAAGH-HVI 74
            ARARRW+ LCS   ++  D+N  FG +SESALHVAAA+GAE  +T L  AGADPNLRD   RSPLH+AA AGH H+I
Sbjct:   21 ARARRWYGLCSPRGRRVIDVNALFGGESESALHVAAARGAEKASTALMIAGADPNLRDRMNRSPLHLAAEAGHRHII 97          
BLAST of mRNA_P-littoralis_Contig86.55.1 vs. uniprot
Match: A0A6H5JGV4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGV4_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 4.550e-11
Identity = 38/58 (65.52%), Postives = 43/58 (74.14%), Query Frame = 0
Query:   17 KPDLNVKFGAKSESALHVAAAQGAEAV--ATVLAGADPNLRDGGERSPLHVAAAAGHH 72
            K D+NV FGA  ESALHVAAA+GAE    A ++AGADPN RDG    PLH+AA AGHH
Sbjct:   67 KGDVNVLFGATRESALHVAAARGAEEASRALMMAGADPNRRDGKACCPLHLAAEAGHH 124          
BLAST of mRNA_P-littoralis_Contig86.55.1 vs. uniprot
Match: D7G692_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G692_ECTSI)

HSP 1 Score: 59.7 bits (143), Expect = 6.320e-8
Identity = 36/63 (57.14%), Postives = 44/63 (69.84%), Query Frame = 0
Query:   19 DLNVKFGAKSESALHVAAAQGAEAVATVL--AGADPNLRDGGERSPLHVAAAAGHHVIMEKLL 79
            D+NV FG + ESALHVAA +  + ++ VL  AGADPNL D   RSPLHVAA  GHH ++  LL
Sbjct:  152 DVNVCFGDRLESALHVAAGRDDQHLSRVLLIAGADPNLLDDVGRSPLHVAAEKGHHRVLGFLL 214          
BLAST of mRNA_P-littoralis_Contig86.55.1 vs. uniprot
Match: D8LQE9_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQE9_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 7.690e-8
Identity = 42/106 (39.62%), Postives = 56/106 (52.83%), Query Frame = 0
Query:    9 WLCSRLAQKPDLNVKFGAKSESALHVAAAQGAEAVATVL--AGADPNLRDGGERSPLHVAAAAGHHVIMEKLLLSRVIPDPKIRDDEQTPPSRCEGRPCALCVESL 112
            W         D+N  FG + ESALHV+AA+GAE  +  L  AGADP+L +  + SPLH+AA AGH  ++ ++LL R   D    D + T           LCV  L
Sbjct:   90 WALLEAGVTDDVNAVFGTERESALHVSAARGAEEASKALMAAGADPDLGNFEDESPLHLAAEAGHDRVV-RVLLERANVD-ATSDFQVTXXXXXXXXXXTLCVSEL 193          
BLAST of mRNA_P-littoralis_Contig86.55.1 vs. uniprot
Match: A0A6H5KQY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQY9_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 3.570e-7
Identity = 38/76 (50.00%), Postives = 49/76 (64.47%), Query Frame = 0
Query:   19 DLNVKFGAKSESALHVAAAQGAEAV--ATVLAGADPNLRDGGER----SPLHVAAAAGHHVIMEKLLLSRVIPDPK 88
            D+NV+FGA S+SAL VAAA+GAE    A ++AGADPN  D  +     S LH+A AAGHH ++  +L      DPK
Sbjct:   98 DVNVRFGAISQSALQVAAARGAEGSCSALMIAGADPNWIDYDDTVQLPSLLHLAGAAGHHRVVRVILQYGAYVDPK 173          
BLAST of mRNA_P-littoralis_Contig86.55.1 vs. uniprot
Match: D8LQL7_ECTSI (Pfs, NACHT and Ankyrin domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQL7_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 1.760e-6
Identity = 28/48 (58.33%), Postives = 36/48 (75.00%), Query Frame = 0
Query:   35 AAAQGAEAVATVLAGADPNLRDGGERSPLHVAAAAGHHVIMEKLLLSR 82
            A A G    A ++AGADPNLRDG +RSPLH+AA AGHH ++  LLL++
Sbjct:   60 AGANGKAGWALMIAGADPNLRDGRKRSPLHLAAEAGHHRVIGSLLLNK 107          
BLAST of mRNA_P-littoralis_Contig86.55.1 vs. uniprot
Match: A0A6H5L812_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L812_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 3.030e-5
Identity = 29/64 (45.31%), Postives = 39/64 (60.94%), Query Frame = 0
Query:   19 DLNVKFGAKSESALHVAAAQGAEAVATVLAGADPNLRDGGERSPLHVAAAAGHHVIMEKLLLSR 82
            D+NV FG + E              A ++ GADPN+RD  +RSPLH+AA AGHH ++  LLL+R
Sbjct:  100 DVNVLFGGERE--------------ALMIDGADPNVRDRRKRSPLHLAAVAGHHRVVGMLLLNR 149          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig86.55.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LTL5_ECTSI6.370e-1663.64MHC_I C-terminus family protein n=1 Tax=Ectocarpus... [more]
A0A6H5JGV4_9PHAE4.550e-1165.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G692_ECTSI6.320e-857.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LQE9_ECTSI7.690e-839.62Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ecto... [more]
A0A6H5KQY9_9PHAE3.570e-750.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQL7_ECTSI1.760e-658.33Pfs, NACHT and Ankyrin domain protein n=1 Tax=Ecto... [more]
A0A6H5L812_9PHAE3.030e-545.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 27..56
e-value: 190.0
score: 10.4
coord: 58..89
e-value: 2.1
score: 17.4
IPR002110Ankyrin repeatPFAMPF12796Ank_2coord: 32..96
e-value: 1.5E-6
score: 28.6
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 2..100
e-value: 1.0E-13
score: 53.2
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 27..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig86contigP-littoralis_Contig86:144476..144841 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig86.55.1mRNA_P-littoralis_Contig86.55.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig86 141997..145107 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig86.55.1 ID=prot_P-littoralis_Contig86.55.1|Name=mRNA_P-littoralis_Contig86.55.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=122bp
MARARRWWWLCSRLAQKPDLNVKFGAKSESALHVAAAQGAEAVATVLAGA
DPNLRDGGERSPLHVAAAAGHHVIMEKLLLSRVIPDPKIRDDEQTPPSRC
EGRPCALCVESLGRRCRQRLP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf