prot_P-littoralis_Contig86.132.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig86.132.1
Unique Nameprot_P-littoralis_Contig86.132.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length85
Homology
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BLAST of mRNA_P-littoralis_Contig86.132.1 vs. uniprot
Match: D8LTF4_ECTSI (WW domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTF4_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 2.020e-18
Identity = 38/58 (65.52%), Postives = 47/58 (81.03%), Query Frame = 0 
Query:   28 MASEATSDNFELNKDRSPATWMRVRDTTGTPFLWYTVLLQIAIACCSAVFLASNEENQ 85
            M  EA +D FELN+DRSPA WMRV DTTG  FLWYTV+L+IA ACCS V++ S++E+Q
Sbjct:    1 MPGEAANDEFELNEDRSPAEWMRVGDTTGDAFLWYTVMLEIASACCSIVYITSHDEDQ 58
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig86.132.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTF4_ECTSI2.020e-1865.52WW domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig86contigP-littoralis_Contig86:481604..483016 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig86.132.1mRNA_P-littoralis_Contig86.132.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig86 481604..483016 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig86.132.1 ID=prot_P-littoralis_Contig86.132.1|Name=mRNA_P-littoralis_Contig86.132.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=85bp
HAGIGEEHNDVEAARPSPLSRSAPVGKMASEATSDNFELNKDRSPATWMR
VRDTTGTPFLWYTVLLQIAIACCSAVFLASNEENQ
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