prot_P-littoralis_Contig86.129.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig86.129.1
Unique Nameprot_P-littoralis_Contig86.129.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length201
Homology
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BLAST of mRNA_P-littoralis_Contig86.129.1 vs. uniprot
Match: A0A6H5JLD2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLD2_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 1.390e-10
Identity = 40/117 (34.19%), Postives = 65/117 (55.56%), Query Frame = 0 
Query:   14 PSLAPMDAVTCSNVSITMEDFDLFDGIY-VMDAMNETLFVRNDSLALLTYVPYEAYSAMNDTDSMSSSAMDSTXXXXXXXXXXXXXXXXXXXXXXTTATSECGRWVLAQVVDDSYTL 129
            PS + M+ + C  +S+ +++   FDGIY +M  MNETLF++NDS A +++VPYE   A+ +T S +++A++                          ATSECG W+LA+    +Y+L
Sbjct:  293 PSPSAMETMGCKTISVIVDEQQQFDGIYHMMAGMNETLFLKNDSSAFMSHVPYEG--AVTNTTSTTTTALN--------------------------ATSECGYWILAEATGGNYSL 381
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BLAST of mRNA_P-littoralis_Contig86.129.1 vs. uniprot
Match: D8LTF3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTF3_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 5.200e-10
Identity = 39/114 (34.21%), Postives = 63/114 (55.26%), Query Frame = 0 
Query:   14 PSLAPMDAVTCSNVSITMEDFDLFDGIY-VMDAMNETLFVRNDSLALLTYVPYEAYSAMNDTDSMSSSAMDSTXXXXXXXXXXXXXXXXXXXXXXTTATSECGRWVLAQVVDDS 126
            PS + M+ + C  +S+ +++   FDGIY +M  MNETLF++NDS A++++VPYE   A  +T S +++A++                          ATSECG W+LA+   +S
Sbjct:  574 PSPSAMETMDCKTISVIVDELQQFDGIYHMMAGMNETLFLKNDSSAIMSHVPYEG--AATNTTSTTTTALN--------------------------ATSECGYWILAEATGNS 659
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig86.129.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JLD2_9PHAE1.390e-1034.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTF3_ECTSI5.200e-1034.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 177..201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig86contigP-littoralis_Contig86:469549..471442 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig86.129.1mRNA_P-littoralis_Contig86.129.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig86 469549..471442 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig86.129.1 ID=prot_P-littoralis_Contig86.129.1|Name=mRNA_P-littoralis_Contig86.129.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=201bp
SSQRGGTFTVSPAPSLAPMDAVTCSNVSITMEDFDLFDGIYVMDAMNETL
FVRNDSLALLTYVPYEAYSAMNDTDSMSSSAMDSTTNSTVNSTVAPTTAD
STTGDSTTTATSECGRWVLAQVVDDSYTLEQFPQVSVQDCAAHPEDIEAT
TSKWMMQNASETELEGAMTGIVECADRPISVAPATPNPSPDVGEDPTISP
S
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