prot_P-littoralis_Contig856.7.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig856.7.1
Unique Nameprot_P-littoralis_Contig856.7.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length926
Homology
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BLAST of mRNA_P-littoralis_Contig856.7.1 vs. uniprot
Match: D7G539_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G539_ECTSI)

HSP 1 Score: 173 bits (439), Expect = 2.330e-45
Identity = 109/246 (44.31%), Postives = 127/246 (51.63%), Query Frame = 0 
Query:  607 LMHGGLLWRESGFGREMEITTDRVPQEMVEACRPVVECVQRQLSIAMACTPNEGTSAHLLLSRKQEVTRSALMGLGAMAVLCGNGNRGCILYERAAEFCRNCGDWSGVANANAAKARLHMATGCFEEAVDGFQLVLKQACELGDGTIATSAQSFLGWTLASKGDARKALEHFHHSRKLAGRAEDHFAVAASELCIAHMRLRLAIXXXXXXXXXXXXXXXXXXXXXXXXTLEERHVDLVEARRHYFR 852
            +M G LLWRESG GR  E+T + V   M E CRPV E ++RQL+IAMAC   E +S      RKQ + R ALMGLG MA LCG+      LYERA + CR  GDW G+A+A AAKA L  A G FEEAV GF+LVLK ACEL D  +A SA S LGW +AS+                               CIAHM +RLAI                             H +LV ARRHY R
Sbjct:    1 MMKGSLLWRESGVGRVTELTAEGVLHGMGETCRPVTEYLRRQLAIAMACESTEESSPPKS-PRKQVIARDALMGLGTMATLCGDDRGARDLYERAVQCCRASGDWIGLAHALAAKAHLQAAAGRFEEAVGGFKLVLKLACELRDDALAASAHSCLGWAMASRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCIAHMHVRLAIVLSGDGDQAVCHDTPQTDPNPALEL--SSHAELVGARRHYSR 243
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig856.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G539_ECTSI2.330e-4544.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 715..748
e-value: 180.0
score: 4.0
coord: 755..788
e-value: 67.0
score: 7.7
coord: 249..282
e-value: 13.0
score: 13.9
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 249..282
score: 8.3784
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 615..811
e-value: 2.7E-11
score: 45.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 820..922
e-value: 2.2E-5
score: 25.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 675..803
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 812..839
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 283..320
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 304..320
NoneNo IPR availablePANTHERPTHR10098RAPSYN-RELATEDcoord: 646..918

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig856contigP-littoralis_Contig856:84210..91452 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig856.7.1mRNA_P-littoralis_Contig856.7.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig856 84210..91452 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig856.7.1 ID=prot_P-littoralis_Contig856.7.1|Name=mRNA_P-littoralis_Contig856.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=926bp
KRLRGEAIDDNSGVRPGRASLAKKEDFVQRSKGQLTTREDIVLSWEARRG
SSTALISLGRGGEALAEAVHAMQLAEQLAEPAIRADCEGLLGRAWRSIAA
KIDQEAKRRQASTAFKALYQEKKTGDNKQHKSLATVYAESEEEENRRYLS
AEPGMDQVAPGSLVGFDIACDLNSHGMTKENQRKAAGCFRRQVNLFRSLD
RFSAPLPQLEPKLDFTAGDDGSCESTKTLRTRTVRAAQSIAQNFHVATLQ
ALLELGQTALSLGEVDSALGVFKQRLRLAESQCPWTPMPSSDHASRDEPS
VPQPRARPSSTSHSPANLGLTTPTHAMVSCEYTTTSLLSKQMAEPTATES
AQPGPWAGRGGCIGTRMVQEVGLALDLAESLWWVAVSIGRQNFGIDLASS
PRQATTFLPFHARLRRLSTCSHGGTHTTSESAEGGSIAERRKYVDRTVSF
TAISRASAMSPSRSEPLYSGNEELPIDARPCTTLCGTGRTDYSSNPDGRA
PISTPSPIPRKVRPPRHQSKAFPGKFRRPEMYIWPRSAKKRRPIPSNATP
HGSRLESCISNFDRKGGAASLYQGPGYAGSCSAEGLDEGGVRGVIRGGTT
SEAPDGLMHGGLLWRESGFGREMEITTDRVPQEMVEACRPVVECVQRQLS
IAMACTPNEGTSAHLLLSRKQEVTRSALMGLGAMAVLCGNGNRGCILYER
AAEFCRNCGDWSGVANANAAKARLHMATGCFEEAVDGFQLVLKQACELGD
GTIATSAQSFLGWTLASKGDARKALEHFHHSRKLAGRAEDHFAVAASELC
IAHMRLRLAISQGGDGDGRNQGDSGNTPHPDPDPTLEERHVDLVEARRHY
FRYLRWAEAMGDLCGVSHANACLARVYQEMGDEEKSEQYRNASLEGCHQR
GDLNNQGKMRALEHEGVVRGMLQLN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf