mRNA_P-littoralis_Contig856.7.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig856.7.1 vs. uniprot
Match: D7G539_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G539_ECTSI) HSP 1 Score: 173 bits (439), Expect = 2.330e-45 Identity = 109/246 (44.31%), Postives = 127/246 (51.63%), Query Frame = 1
Query: 1819 LMHGGLLWRESGFGREMEITTDRVPQEMVEACRPVVECVQRQLSIAMACTPNEGTSAHLLLSRKQEVTRSALMGLGAMAVLCGNGNRGCILYERAAEFCRNCGDWSGVANANAAKARLHMATGCFEEAVDGFQLVLKQACELGDGTIATSAQSFLGWTLASKGDARKALEHFHHSRKLAGRAEDHFAVAASELCIAHMRLRLAIXXXXXXXXXXXXXXXXXXXXXXXXTLEERHVDLVEARRHYFR 2556
+M G LLWRESG GR E+T + V M E CRPV E ++RQL+IAMAC E +S RKQ + R ALMGLG MA LCG+ LYERA + CR GDW G+A+A AAKA L A G FEEAV GF+LVLK ACEL D +A SA S LGW +AS+ CIAHM +RLAI H +LV ARRHY R
Sbjct: 1 MMKGSLLWRESGVGRVTELTAEGVLHGMGETCRPVTEYLRRQLAIAMACESTEESSPPKS-PRKQVIARDALMGLGTMATLCGDDRGARDLYERAVQCCRASGDWIGLAHALAAKAHLQAAAGRFEEAVGGFKLVLKLACELRDDALAASAHSCLGWAMASRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCIAHMHVRLAIVLSGDGDQAVCHDTPQTDPNPALEL--SSHAELVGARRHYSR 243 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig856.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig856.7.1 >prot_P-littoralis_Contig856.7.1 ID=prot_P-littoralis_Contig856.7.1|Name=mRNA_P-littoralis_Contig856.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=926bp KRLRGEAIDDNSGVRPGRASLAKKEDFVQRSKGQLTTREDIVLSWEARRGback to top mRNA from alignment at P-littoralis_Contig856:84210..91452+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig856.7.1 ID=mRNA_P-littoralis_Contig856.7.1|Name=mRNA_P-littoralis_Contig856.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7243bp|location=Sequence derived from alignment at P-littoralis_Contig856:84210..91452+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig856:84210..91452+ >mRNA_P-littoralis_Contig856.7.1 ID=mRNA_P-littoralis_Contig856.7.1|Name=mRNA_P-littoralis_Contig856.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2778bp|location=Sequence derived from alignment at P-littoralis_Contig856:84210..91452+ (Pylaiella littoralis U1_48)back to top |