prot_P-littoralis_Contig854.4.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig854.4.2
Unique Nameprot_P-littoralis_Contig854.4.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length334
Homology
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BLAST of mRNA_P-littoralis_Contig854.4.2 vs. uniprot
Match: D8LSM8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSM8_ECTSI)

HSP 1 Score: 300 bits (768), Expect = 3.530e-97
Identity = 216/307 (70.36%), Postives = 231/307 (75.24%), Query Frame = 0 
Query:    1 MLASATEVEVELHVPENVSTFFGVTWAQDPRKDKIFIKAFPRGSDGRRGILESTGLVEVDDCLTAINGVPLDKSSGLHEVMACIRAAKSPLSLRFARYPPXXXXXXXXXXXXXXXXSGSSAXXXXXXXXXXXXGGIXXXXXXXXXXXXXXXXXXXXXXXXGSGDSVRSGQSTGNSSSRGYGSLATTAARARARTG---DAEDPELDAVLNSALVLGLGERVAEIQKRNGRLLQEVDRIGRAAASKRQGVEKVASAAASLTAAG-DSLPKQALRLLSAARHDAVALCEAMARLDELLAVRERAQMARR 303
            MLASATEVEVELHVP++VSTFFGVTWAQDPRK+KIFIKAFPRG +GRRGILESTGLVE+DDCLTAINGV +DKSS LHEVMA IRAA+SPLSLRFARYPP                  S +    XXXXXXXX   XXXXXXXXXXXXXXXXXXX     G+G S                                 DA DP+LDAVLNSALVLGLGERVA+IQKRN RLLQEVDRIGRAAA KRQGVE+VASAAASLTAAG D LP++ALRLLSAAR DAVALCEAMARLDELLA RERAQ+ARR
Sbjct:    1 MLASATEVEVELHVPDDVSTFFGVTWAQDPRKNKIFIKAFPRGPNGRRGILESTGLVELDDCLTAINGVSVDKSSALHEVMASIRAAESPLSLRFARYPPPPLQRCSPSSSLSSPSLFSPSPSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGRHIGAGKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRDAADPDLDAVLNSALVLGLGERVADIQKRNSRLLQEVDRIGRAAADKRQGVERVASAAASLTAAGSDLLPRRALRLLSAARQDAVALCEAMARLDELLAARERAQLARR 307
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig854.4.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSM8_ECTSI3.530e-9770.36Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036034PDZ superfamilyGENE3D2.30.42.10coord: 4..98
e-value: 3.3E-5
score: 25.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 140..195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 299..333
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..183
IPR001478PDZ domainPROSITEPS50106PDZcoord: 9..99
score: 8.8881

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig854contigP-littoralis_Contig854:28041..32537 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig854.4.2mRNA_P-littoralis_Contig854.4.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig854 27327..32780 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig854.4.2 ID=prot_P-littoralis_Contig854.4.2|Name=mRNA_P-littoralis_Contig854.4.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=334bp
MLASATEVEVELHVPENVSTFFGVTWAQDPRKDKIFIKAFPRGSDGRRGI
LESTGLVEVDDCLTAINGVPLDKSSGLHEVMACIRAAKSPLSLRFARYPP
PPLLHSSSSSSSSSFFSGSSASATGSASVAAAVGGIGTATPSPPAADSLS
SSSGGGRGGNGSGDSVRSGQSTGNSSSRGYGSLATTAARARARTGDAEDP
ELDAVLNSALVLGLGERVAEIQKRNGRLLQEVDRIGRAAASKRQGVEKVA
SAAASLTAAGDSLPKQALRLLSAARHDAVALCEAMARLDELLAVRERAQM
ARRRNLEQEDRRGGGGMASGGGGGDGLPRGVRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036034PDZ_sf
IPR001478PDZ