prot_P-littoralis_Contig852.11.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig852.11.1
Unique Nameprot_P-littoralis_Contig852.11.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length89
Homology
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BLAST of mRNA_P-littoralis_Contig852.11.1 vs. uniprot
Match: Q8QNC6_ESV1K (EsV-1-156 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNC6_ESV1K)

HSP 1 Score: 94.4 bits (233), Expect = 2.830e-21
Identity = 46/85 (54.12%), Postives = 57/85 (67.06%), Query Frame = 0 
Query:    1 MEEFTGVIGDWLHPLKSKEQLGQLTLNFFYLLDSFRRHKLTHADLHLWNLGYVYTDASKKHLKLMPIDFGRSRKGKLTRSWRLAA 85
            MEE  GV+G WL   KS +QL +       L+ +FR H LTH DLHL N+GYVYTDASK++++LMPIDFGRS  GK   S  + A
Sbjct:  172 MEEIAGVLGQWLRREKSNQQLHKTAFEITKLMVAFRNHGLTHGDLHLNNIGYVYTDASKRYMRLMPIDFGRSYVGKAFTSLEVGA 256
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig852.11.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Q8QNC6_ESV1K2.830e-2154.12EsV-1-156 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig852contigP-littoralis_Contig852:59791..60057 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig852.11.1mRNA_P-littoralis_Contig852.11.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig852 59791..60536 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig852.11.1 ID=prot_P-littoralis_Contig852.11.1|Name=mRNA_P-littoralis_Contig852.11.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=89bp
MEEFTGVIGDWLHPLKSKEQLGQLTLNFFYLLDSFRRHKLTHADLHLWNL
GYVYTDASKKHLKLMPIDFGRSRKGKLTRSWRLAASCAS
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