prot_P-littoralis_Contig85.52.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig85.52.1
Unique Nameprot_P-littoralis_Contig85.52.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length161
Homology
BLAST of mRNA_P-littoralis_Contig85.52.1 vs. uniprot
Match: UPI0008295CFC (pyridoxal-dependent decarboxylase n=1 Tax=Nocardia harenae TaxID=358707 RepID=UPI0008295CFC)

HSP 1 Score: 62.8 bits (151), Expect = 1.510e-8
Identity = 39/117 (33.33%), Postives = 57/117 (48.72%), Query Frame = 0
Query:    5 ADLFGADPDDVDGYVATGSSESNACAIRWACETFSSAPFIGGENMHFSIKRAIKVVGRELLQVKAEKGGEMDIDALGRGLAGCRDQGVSEVCVMLVCGTTMGEAHDNIDAAIKSSMP 121
            A L    PD+  GY+A   SE+N   +   C    +A        H+SI++A +++ REL+ V A+  G MD  AL    A CR        V+    TTM  A D++DA I ++ P
Sbjct:   96 ARLANGAPDETYGYIAAAGSEANLFGLDRGCTALPAARIYCSSAAHYSIRKAARLMRRELVVVDADPTGRMDPAALA---ATCRRDAGRGAIVVATLSTTMTGAVDDVDAIIAAASP 209          
BLAST of mRNA_P-littoralis_Contig85.52.1 vs. uniprot
Match: UPI001E2CD027 (pyridoxal-dependent decarboxylase n=1 Tax=Nocardia asteroides TaxID=1824 RepID=UPI001E2CD027)

HSP 1 Score: 59.3 bits (142), Expect = 2.420e-7
Identity = 37/115 (32.17%), Postives = 55/115 (47.83%), Query Frame = 0
Query:    5 ADLFGADPDDVDGYVATGSSESNACAIRWACETFSSAPFIGGENMHFSIKRAIKVVGRELLQVKAEKGGEMDIDALGRGLAGCRDQGVSEVCVMLVCGTTMGEAHDNIDAAIKSS 119
            A L    PD+  GY+A   SE+N   +   C     A        H+SI++A +++ REL+ V A+  G MD  AL    A CR        V+    TTM  A D++DA + ++
Sbjct:   95 ARLANGAPDETYGYIAASGSEANLFGLDRGCVALPDAKIYCSGAAHYSIRKAARLMRRELVVVAADATGRMDPAALA---AACRPGAGRGAIVVATLSTTMTGAIDDVDAIVAAA 206          
BLAST of mRNA_P-littoralis_Contig85.52.1 vs. uniprot
Match: A0A6H9TML6_9BURK (Histidine decarboxylase n=2 Tax=Burkholderia latens TaxID=488446 RepID=A0A6H9TML6_9BURK)

HSP 1 Score: 56.6 bits (135), Expect = 2.070e-6
Identity = 36/108 (33.33%), Postives = 56/108 (51.85%), Query Frame = 0
Query:    5 ADLFGADPDDVDGYVATGSSESNACAIRWACETFSSAPFIGGENMHFSIKRAIKVVGRELLQVKAEKGGEMDIDALGRGLAGCRDQGVSEVCVMLVCGTTMGEAHDNI 112
            A LF A  DD  GYV  G +E N   +  A E           + H+S+ +A++++G  ++ V+++  GEMD D L R  A  RD+  +   V+   GTTM E  D++
Sbjct:   74 ASLFNAGDDDYWGYVTNGGTEGNIYGLYIARELHPDGVLYCTADTHYSVSKAVRLLGLTVVTVRSQPHGEMDYDDL-RSKA--RDRLHNPAIVVANLGTTMKEGKDDV 178          
BLAST of mRNA_P-littoralis_Contig85.52.1 vs. uniprot
Match: A0A1H4ECY2_9FLAO (L-histidine carboxy-lyase (Histamine-forming) n=2 Tax=Flavobacterium TaxID=237 RepID=A0A1H4ECY2_9FLAO)

HSP 1 Score: 53.5 bits (127), Expect = 2.480e-5
Identity = 36/122 (29.51%), Postives = 58/122 (47.54%), Query Frame = 0
Query:    2 MMCADLFGADPDDVDGYVATGSSESNACAIRWACETF---------SSAPFIGGENMHFSIKRAIKVVGRELLQVKAEKGGEM-DIDALGRGLAGCRDQGVSEVCVMLVCGTTMGEAHDNID 113
            ++  D+F A PD  DGY+A G +E+N  AI W    +         S    I  E+ H+SI +A  ++  + L +  +    + D+ AL   +   +++G     V+   GTTM  A DN D
Sbjct:   92 VLAVDIFKAQPDSFDGYIAPGGTEANIQAI-WIYRNYFMYKQNAKLSEIAIIASEDTHYSIPKAANLLMLDWLNIPVDFDTRLIDVFALETSIINAKERGKKYFIVVSNMGTTMFGAVDNPD 212          
BLAST of mRNA_P-littoralis_Contig85.52.1 vs. uniprot
Match: A0A1M3E627_9BACT (Aspartate aminotransferase family protein n=1 Tax=Bacteroidetes bacterium 43-16 TaxID=1895923 RepID=A0A1M3E627_9BACT)

HSP 1 Score: 52.4 bits (124), Expect = 6.180e-5
Identity = 33/122 (27.05%), Postives = 66/122 (54.10%), Query Frame = 0
Query:    2 MMCADLFGADPDDVDGYVATGSSESNACAIRWACET-----FSSAP----FIGGENMHFSIKRAIKVVGRELLQVKAEKGG-EMDIDALGRGLAGCRDQGVSEVCVMLVCGTTMGEAHDNID 113
            M+C D+FGA+ +  DGY+A+G +E+N  A+ W         + + P     +  E+ H+S+ +A  ++      V  ++   ++D++AL + ++  +++G   + V+   GTTM  + DN D
Sbjct:   92 MLCEDIFGAEENSYDGYIASGGTEANIQAV-WMYRNLFINEYKARPEEILLLASEDTHYSVAKASNLLQIRHRSVPVDRDSRQIDLNALDQIVSEEKNKGKKYIIVISNVGTTMFGSIDNPD 212          
BLAST of mRNA_P-littoralis_Contig85.52.1 vs. uniprot
Match: A0A4R5CUB3_9FLAO (Aspartate aminotransferase family protein n=6 Tax=Flavobacterium TaxID=237 RepID=A0A4R5CUB3_9FLAO)

HSP 1 Score: 52.0 bits (123), Expect = 8.410e-5
Identity = 36/120 (30.00%), Postives = 59/120 (49.17%), Query Frame = 0
Query:    2 MMCADLFGADPDDVDGYVATGSSESNACAIRWACETF---------SSAPFIGGENMHFSIKRAIKVVGRELLQVKAE-KGGEMDIDALGRGLAGCRDQGVSEVCVMLVCGTTMGEAHDN 111
            ++  D+F A+P+  DGY+A G +E+N  AI W    +         S    I  E+ H+SI +A  V+  + L++  + +   +DI AL   +   + +G     V+   GTTM  A DN
Sbjct:   92 VLAIDVFKAEPNSFDGYIAPGGTEANIQAI-WMYRNYFMNKLNTSLSEIAIIASEDTHYSIPKAANVLMLDWLKIPVDFETRAIDIFALENSIINAKKRGKKYFIVVSNMGTTMFGAIDN 210          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig85.52.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
UPI0008295CFC1.510e-833.33pyridoxal-dependent decarboxylase n=1 Tax=Nocardia... [more]
UPI001E2CD0272.420e-732.17pyridoxal-dependent decarboxylase n=1 Tax=Nocardia... [more]
A0A6H9TML6_9BURK2.070e-633.33Histidine decarboxylase n=2 Tax=Burkholderia laten... [more]
A0A1H4ECY2_9FLAO2.480e-529.51L-histidine carboxy-lyase (Histamine-forming) n=2 ... [more]
A0A1M3E627_9BACT6.180e-527.05Aspartate aminotransferase family protein n=1 Tax=... [more]
A0A4R5CUB3_9FLAO8.410e-530.00Aspartate aminotransferase family protein n=6 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015421Pyridoxal phosphate-dependent transferase, major domainGENE3D3.40.640.10coord: 1..119
e-value: 1.9E-17
score: 65.0
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 3..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig85contigP-littoralis_Contig85:242762..243244 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig85.52.1mRNA_P-littoralis_Contig85.52.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig85 242702..243420 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig85.52.1 ID=prot_P-littoralis_Contig85.52.1|Name=mRNA_P-littoralis_Contig85.52.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=161bp
MMMCADLFGADPDDVDGYVATGSSESNACAIRWACETFSSAPFIGGENMH
FSIKRAIKVVGRELLQVKAEKGGEMDIDALGRGLAGCRDQGVSEVCVMLV
CGTTMGEAHDNIDAAIKSSMPRAMIANTVTSTLTVPTAGLSCRFSKTLIR
AFVWTFGVRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015421PyrdxlP-dep_Trfase_major
IPR015424PyrdxlP-dep_Trfase