prot_P-littoralis_Contig847.15.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig847.15.1
Unique Nameprot_P-littoralis_Contig847.15.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length150
Homology
BLAST of mRNA_P-littoralis_Contig847.15.1 vs. uniprot
Match: A0A6H5KC66_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC66_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 3.400e-31
Identity = 69/152 (45.39%), Postives = 99/152 (65.13%), Query Frame = 0
Query:    1 MQHVPREDVVGLLKQMLNIDAFFKFGLKLYSLDQNMNFRAQRHRKDIRLRAADEWTTKDQELNKYIVNDDILENLVEKTCEAVEMFGEDIPEYS----SMYAHDIFANRDSTHLKSREAYEQARNKGLDNIAVTITDRVKWLRSWSAKKIKL 148
            +QH+ RE VV LLKQ LN+  FFKFGLKLYSL QN+NFR +++  D+R+R  D+W T    ++K    D+IL  LVEKT EAVEM+ + + E+     +M+   +   RDS+  + ++ YE+ RNKGLD IAV++  R+  L  W  K++ L
Sbjct:  119 LQHITREYVVDLLKQTLNVGVFFKFGLKLYSLPQNVNFRTRKYYSDVRVRTKDKWIT----VSKDEAYDEILFMLVEKTHEAVEMYKDGVSEFDMNHFNMFLPVVLEGRDSSVPERKKLYEKRRNKGLDTIAVSVNARLSQLGRWRGKRVTL 266          
BLAST of mRNA_P-littoralis_Contig847.15.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 6.990e-31
Identity = 69/152 (45.39%), Postives = 99/152 (65.13%), Query Frame = 0
Query:    1 MQHVPREDVVGLLKQMLNIDAFFKFGLKLYSLDQNMNFRAQRHRKDIRLRAADEWTTKDQELNKYIVNDDILENLVEKTCEAVEMFGEDIPEYS----SMYAHDIFANRDSTHLKSREAYEQARNKGLDNIAVTITDRVKWLRSWSAKKIKL 148
            +QH+ RE VV LLKQ LN+  FFKFGLKLYSL QN+NFR +++  D+R+R  D+W T    ++K    D+IL  LVEKT EAVEM+ + + E+     +M+   +   RDS   + ++ YE++RNKGLD IAV++  R+  L  W  K++ L
Sbjct: 2247 LQHITREYVVDLLKQTLNVGVFFKFGLKLYSLPQNVNFRTRKYYSDVRVRTKDKWIT----VSKDEAYDEILFMLVEKTHEAVEMYRDGVSEFDMNHFNMFLPVVLEGRDSPVPERKKLYEKSRNKGLDTIAVSVNARLSQLGRWRGKRVTL 2394          
BLAST of mRNA_P-littoralis_Contig847.15.1 vs. uniprot
Match: Q8QN59_ESV1K (EsV-1-231 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QN59_ESV1K)

HSP 1 Score: 112 bits (280), Expect = 1.030e-26
Identity = 69/154 (44.81%), Postives = 97/154 (62.99%), Query Frame = 0
Query:    1 MQHVPREDVVGLLKQMLNIDAFFKFGLKLYSLDQNMNFRAQRHRKDIRLRAADE-WTTKDQELNKYIVNDDILENLVEKTCEAVEMFGEDIPEYS----SMYAHDIFANRDSTHLKSREAYEQARNKGLDNIAVTITDRVKWLRSWSAKKIKLV 149
            +QH+    V  LL+ +  ID F+KFGLKLYSL QN+NFRA++  K+ R+  + + W T    + +    D+IL+ LVEKT EAV MF + IP Y      MY+  I A++DS   + R+ YE+ RNK L+NIAV++TD +  +  WS KK KLV
Sbjct:  215 LQHITSNYVADLLRPLPGIDVFYKFGLKLYSLHQNINFRARKGDKNARVCCSRKGWIT----VPRDEAYDEILQILVEKTREAVSMFRQTIPAYYFDHFDMYSDSILAHKDSAVPEQRKLYERRRNKVLNNIAVSVTDNLCRMGGWSDKKRKLV 364          
BLAST of mRNA_P-littoralis_Contig847.15.1 vs. uniprot
Match: D8LP42_ECTSI (EsV-1-231 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP42_ECTSI)

HSP 1 Score: 107 bits (267), Expect = 1.640e-25
Identity = 67/154 (43.51%), Postives = 96/154 (62.34%), Query Frame = 0
Query:    1 MQHVPREDVVGLLKQMLNIDAFFKFGLKLYSLDQNMNFRAQRHRKDIRLRAADE-WTTKDQELNKYIVNDDILENLVEKTCEAVEMFGEDIPEYS----SMYAHDIFANRDSTHLKSREAYEQARNKGLDNIAVTITDRVKWLRSWSAKKIKLV 149
            ++H+    V  LL+ +  ID F+KFGLKLYSL QN+NFRA++  K+ R+  + + W T    + +    D+IL+ LVEKT EAV MF + IP Y      M++  I A +DS   + R+ YE+ RNK L+NIAV++TD +  +  WS KK KLV
Sbjct:  117 LRHISGNYVADLLRPLPGIDVFYKFGLKLYSLHQNINFRARKGDKNARVCCSRKGWIT----VPRDEAYDEILQILVEKTREAVSMFRQTIPAYYFDHFDMHSDSILAYKDSAVPEQRKLYERRRNKVLNNIAVSVTDNLCRMGGWSDKKRKLV 266          
BLAST of mRNA_P-littoralis_Contig847.15.1 vs. uniprot
Match: A0A6H5K0V6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0V6_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 1.870e-16
Identity = 59/150 (39.33%), Postives = 86/150 (57.33%), Query Frame = 0
Query:    1 MQHVPREDVVGLLKQMLNIDAFFKFGLKLYSLDQNMNFRAQRHRKDIRLRAADE-WTTKDQELNKYIVNDDILENLVEKTCEAVEMFGEDIPEYSSMYAHDIFANRDSTHLKSREAYEQARNKGLDNIAVTITDRVKWLRSWSAKKIKLV 149
            +QH   + +  LL+ +  ID F KFGLKLYSL QN+NFR ++  K+ R+  + + W T  +E   Y   D+IL+ LV+KT EAV +               I A +DS   + R+ YE  R + L+NIAV++TD ++ +  WS KK KLV
Sbjct:  117 LQHATSDFIADLLRPLPGIDVFNKFGLKLYSLHQNINFRVRKGDKNARVCCSRKGWITVPRE-EAY---DEILQILVKKTREAVSI---------------ILAYKDSAFPEQRKLYE--RRRILNNIAVSVTDNMRRMSGWSDKKRKLV 245          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig847.15.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KC66_9PHAE3.400e-3145.39Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JH58_9PHAE6.990e-3145.39Reverse transcriptase domain-containing protein n=... [more]
Q8QN59_ESV1K1.030e-2644.81EsV-1-231 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
D8LP42_ECTSI1.640e-2543.51EsV-1-231 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5K0V6_9PHAE1.870e-1639.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig847contigP-littoralis_Contig847:70130..70579 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig847.15.1mRNA_P-littoralis_Contig847.15.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig847 69785..70579 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig847.15.1 ID=prot_P-littoralis_Contig847.15.1|Name=mRNA_P-littoralis_Contig847.15.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=150bp
MQHVPREDVVGLLKQMLNIDAFFKFGLKLYSLDQNMNFRAQRHRKDIRLR
AADEWTTKDQELNKYIVNDDILENLVEKTCEAVEMFGEDIPEYSSMYAHD
IFANRDSTHLKSREAYEQARNKGLDNIAVTITDRVKWLRSWSAKKIKLV*
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