prot_P-littoralis_Contig75.123.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig75.123.1
Unique Nameprot_P-littoralis_Contig75.123.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length371
Homology
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BLAST of mRNA_P-littoralis_Contig75.123.1 vs. uniprot
Match: A0A6H5JRI3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRI3_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 1.620e-11
Identity = 57/162 (35.19%), Postives = 83/162 (51.23%), Query Frame = 0 
Query:  197 FMCTQASAIHVGMRHPQAKKDEGERLLKLLLEPSASVTKMPWEGVGMGLVW--VADFKTGRAEFGIQQQRTTPID---DGFATDDEGKGEGRRGALVRKRYSYRQKAVAIERLRECQQQAAEIEEKYHMGPLQFAAQVAGVPQSNLHKWAGDEAVVVGKAAE 353
            F+  Q   IHV  +H  A    G RL ++L +      + PW   G G  W    D  TG A F +Q++R   +D   DGF    + K +  RGA+ RKRY  R KA+ + +LR  Q+ AA++ ++  + PLQ+      V  S + KWA DEA +V  AA+
Sbjct:    3 FVNEQGLGIHVKTQHSNATMSNGLRLQRMLGKTPKGYVQ-PWGEAGPGRCWHVKVDGATGAASFVLQRKRFRDLDLESDGFT---DRKVKETRGAVKRKRYDVRFKALVVTQLRLLQEDAADLFKEEQLTPLQYLEDRLKVNYSLIVKWAQDEANIVQSAAD 160
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig75.123.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JRI3_9PHAE1.620e-1135.19Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 297..317
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..137
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 190..211

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig75contigP-littoralis_Contig75:394038..396005 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig75.123.1mRNA_P-littoralis_Contig75.123.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig75 393836..396036 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig75.123.1 ID=prot_P-littoralis_Contig75.123.1|Name=mRNA_P-littoralis_Contig75.123.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=371bp
MHVHVVFCWAPTRRCVFTHVCVMDAAAVLALKSKLASLKHKGALTTEHFS
LLKAKAKDRLVTEQVLQNLSSLWNLRCDGSVEEEDEEDLQMIFKELAPRE
KDSGAEEPTAIQRGRLAPAAVSGRPASKWEREKASQLSRSAASAHQHIIT
SFVKGSGGPIERTRNDGSVELVAGVVATPLPTTGVPTVQCPYCPKKFMCT
QASAIHVGMRHPQAKKDEGERLLKLLLEPSASVTKMPWEGVGMGLVWVAD
FKTGRAEFGIQQQRTTPIDDGFATDDEGKGEGRRGALVRKRYSYRQKAVA
IERLRECQQQAAEIEEKYHMGPLQFAAQVAGVPQSNLHKWAGDEAVVVGK
AAEKGVRQDRPPKKTKHGRF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type