prot_P-littoralis_Contig745.7.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig745.7.1
Unique Nameprot_P-littoralis_Contig745.7.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length159
Homology
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BLAST of mRNA_P-littoralis_Contig745.7.1 vs. uniprot
Match: D7FL62_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL62_ECTSI)

HSP 1 Score: 205 bits (521), Expect = 2.600e-65
Identity = 112/126 (88.89%), Postives = 118/126 (93.65%), Query Frame = 0 
Query:    1 MHGALATLGLVVAFMAAASNAFVVPGPSKMVSGRSTRASTSQVIVMGRGDTRTTKGKRMRHSYGKCRPQKQKEVIYFEGEIVKKAAPVARRWENVEYDEASMPKPAPVEAAVAEEVVVEVEAEGAV 126
            MHGALATLGLVVA MA+ SNAFVVPGPS++VSGRSTRASTSQVIVMGRGDTRTTKGKRMRHSYGKCRPQKQKEV+YFEGEIVKKAAPVARRWEN+EYDEASMPKPAPVEAA AEEV    EA+ AV
Sbjct:    1 MHGALATLGLVVAMMASVSNAFVVPGPSQVVSGRSTRASTSQVIVMGRGDTRTTKGKRMRHSYGKCRPQKQKEVVYFEGEIVKKAAPVARRWENIEYDEASMPKPAPVEAA-AEEVTEAEEADSAV 125
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig745.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FL62_ECTSI2.600e-6588.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR03082630S ribosomal proteinTIGRFAMTIGR04560TIGR04560coord: 46..70
e-value: 1.7E-9
score: 35.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..158

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig745contigP-littoralis_Contig745:69601..73192 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig745.7.1mRNA_P-littoralis_Contig745.7.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig745 68341..73376 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig745.7.1 ID=prot_P-littoralis_Contig745.7.1|Name=mRNA_P-littoralis_Contig745.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=159bp
MHGALATLGLVVAFMAAASNAFVVPGPSKMVSGRSTRASTSQVIVMGRGD
TRTTKGKRMRHSYGKCRPQKQKEVIYFEGEIVKKAAPVARRWENVEYDEA
SMPKPAPVEAAVAEEVVVEVEAEGAVEEAGAVVEEPAAEEPAAEEPAAEE
PVSRLIWV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR030826Ribo_THX