prot_P-littoralis_Contig74.85.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig74.85.2
Unique Nameprot_P-littoralis_Contig74.85.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length454
Homology
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BLAST of mRNA_P-littoralis_Contig74.85.2 vs. uniprot
Match: D7FQY5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQY5_ECTSI)

HSP 1 Score: 526 bits (1354), Expect = 1.740e-181
Identity = 281/444 (63.29%), Postives = 335/444 (75.45%), Query Frame = 0 
Query:    1 MALQDLHRKNSYCDFCDDDTVQASHVCDECESLLCTFHVKAHAVSRGTKSHTVASLTEKARKGAELGILHCVPITCARHAGVPAKLFCSEPCGATICHNCSVTEHSGHTVYLADSEEVELLHRTGLTRRGVSLGHSLAKVQGALDAVEAVKTGVEQHSRMAEKSAVQVFASIRAAVDSREKAVLENLQADRASKLQDLNKQLNELTETIKAYAAALDTTNESLKYLHGNQLLAMEPTLRECLDKHEANFLSEQLEPCSGDRVEFEYDRDIAIALRLGISQVGYLAQTKADFGSTSDRTHKRGKPRAPEQEVHTSWTSNGHDIHFTLAAIVGARPQEELTLATPTDVVIVEIRNGSELEFLKNGKPGPVIGRVALHTKLKGARHLKYESEHFFESLSQQAAPKWQQRKQLQEGKQQQELSSCHEID-DGIPTVRFTKTLRVSGRR 443
            +ALQD+HRKNS+CDFCDD   +ASHVC EC SLLCTFH+ AH+VSRGTKSH V SL  +          H V ITCARH  V AKLFCSEPCG TICHNCSV EHSGH+V+ +DS EVE +HR GLTRRGVSLGH LA+V+G LDAVEAVKTGVE+H+R+AE + VQ F++IRAAVDSREK +L+NL+ADRA K QDLN QL +L + ++AY  ALD+TN SL+ LHG+Q LAMEPT+RECLD  EA F S +L PC  DRVEFE+DR IA ALR GIS++G +               K+ K  APEQE+H S T + H+IHF+LAAIVGARPQE  TLA+PTD VIVEIR+GSE +FLK+G  GPVIGRVALHTK KGA+HL YE+EHFFESLSQ+A P  Q RKQ  + +++++       D D +P VRFTK LRV GRR
Sbjct:   87 VALQDVHRKNSHCDFCDD-VAKASHVCHECASLLCTFHMTAHSVSRGTKSHRVVSLKNREAS-------HRVQITCARHRDVEAKLFCSEPCGTTICHNCSVAEHSGHSVFFSDSAEVEQVHRAGLTRRGVSLGHRLARVRGGLDAVEAVKTGVEKHTRLAESATVQAFSAIRAAVDSREKEILKNLRADRAQKTQDLNAQLAKLGQVMRAYEIALDSTNTSLERLHGDQFLAMEPTIRECLDAREAEFPSLELTPCVEDRVEFEHDRSIANALRQGISRLGCVVNAVRP-------RKKKEKSTAPEQELHASSTPSEHNIHFSLAAIVGARPQEA-TLASPTDKVIVEIRSGSEHDFLKSGTTGPVIGRVALHTKFKGAKHLAYETEHFFESLSQRATPTRQSRKQQHQAEKERQKQPTPSRDGDCVPAVRFTKVLRVFGRR 514
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BLAST of mRNA_P-littoralis_Contig74.85.2 vs. uniprot
Match: A0A164XH13_9CRUS (Protein wech n=9 Tax=Daphnia TaxID=6668 RepID=A0A164XH13_9CRUS)

HSP 1 Score: 68.2 bits (165), Expect = 1.830e-8
Identity = 79/299 (26.42%), Postives = 131/299 (43.81%), Query Frame = 0 
Query:   13 CDFCDDDTVQASHVCDECESLLCTFHVKAHAVSRGTKSHTVASLTEKARK--GAELGI-LHCVPIT--CARHAGVPAKLFCSEPCGATICHNCSVTEHSGHT-VYLADSEEVELLHRTGLTRRGVSLGHSLAKVQGALDAVEAVKTGVEQHSRMAEK---SAVQVFASIR-------AAVDSREKAVLENLQADRASKLQDLNKQLNELTETIKAYAAALDTTNESLKYLHGNQLLAMEPTLRECLDKHEANFLSEQLEPCSGDRVEFEYDRDIAIALRLGISQVGYLAQTKADFGSTS 295
            C  CD+  V +S  C +C  +LC   V+AH   R TK H +   TE   K  G  +G+ L   P    C  H     +LFC + C   IC  C++ +H GH+ +YL D+ E              S   SL  +  A   + AV+  +E  S+MAE+    A  +   IR       AA++ RE+ +L+ ++  R  K + L+ QL+EL   +    +  +    +L+   G+ +  +    +  ++      +   L+P   D ++F        AL   I  +G ++ +   FG TS
Sbjct:  187 CSNCDEGAVASSR-CRDCNEVLCDSCVRAHQRVRLTKDHYIVRFTEDLSKTVGLPVGLSLFSSPSFSYCDIHPAEVLRLFC-DMCSVAICSECTLRDHRGHSFIYLKDAVEN-------------SKTISLKLLADAKAGMRAVEESMEMTSKMAERIELRAQAIATEIRTATRRHMAALEERERELLQRVEKIRQVKGKSLHLQLDELRMALLRLGSTAELLKTALE--SGSDVEILHTKDKALIEFQHLRQIRSSLQPQEDDIIQFNPPDG---ALLQAICSLGLISSS--GFGPTS 463
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig74.85.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQY5_ECTSI1.740e-18163.29Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A164XH13_9CRUS1.830e-826.42Protein wech n=9 Tax=Daphnia TaxID=6668 RepID=A0A1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 184..222
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 9..113
e-value: 1.7E-11
score: 46.5
NoneNo IPR availablePANTHERPTHR25462:SF272TRIPARTITE MOTIF-CONTAINING PROTEIN 45coord: 26..220
NoneNo IPR availablePANTHERPTHR25462BONUS, ISOFORM C-RELATEDcoord: 26..220
NoneNo IPR availableSUPERFAMILY57845B-box zinc-binding domaincoord: 73..116
IPR000315B-box-type zinc fingerSMARTSM00336bboxneu5coord: 70..113
e-value: 0.06
score: 20.1
coord: 8..56
e-value: 0.21
score: 14.5
IPR000315B-box-type zinc fingerPFAMPF00643zf-B_boxcoord: 75..110
e-value: 1.5E-7
score: 31.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig74contigP-littoralis_Contig74:379058..380970 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig74.85.2mRNA_P-littoralis_Contig74.85.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig74 378622..381489 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig74.85.2 ID=prot_P-littoralis_Contig74.85.2|Name=mRNA_P-littoralis_Contig74.85.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=454bp
MALQDLHRKNSYCDFCDDDTVQASHVCDECESLLCTFHVKAHAVSRGTKS
HTVASLTEKARKGAELGILHCVPITCARHAGVPAKLFCSEPCGATICHNC
SVTEHSGHTVYLADSEEVELLHRTGLTRRGVSLGHSLAKVQGALDAVEAV
KTGVEQHSRMAEKSAVQVFASIRAAVDSREKAVLENLQADRASKLQDLNK
QLNELTETIKAYAAALDTTNESLKYLHGNQLLAMEPTLRECLDKHEANFL
SEQLEPCSGDRVEFEYDRDIAIALRLGISQVGYLAQTKADFGSTSDRTHK
RGKPRAPEQEVHTSWTSNGHDIHFTLAAIVGARPQEELTLATPTDVVIVE
IRNGSELEFLKNGKPGPVIGRVALHTKLKGARHLKYESEHFFESLSQQAA
PKWQQRKQLQEGKQQQELSSCHEIDDGIPTVRFTKTLRVSGRRQRVEGSQ
SPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000315Znf_B-box