prot_P-littoralis_Contig680.33.8 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig680.33.8
Unique Nameprot_P-littoralis_Contig680.33.8
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length84
Homology
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BLAST of mRNA_P-littoralis_Contig680.33.8 vs. uniprot
Match: D8LFD9_ECTSI (UBP-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFD9_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 1.930e-22
Identity = 61/84 (72.62%), Postives = 67/84 (79.76%), Query Frame = 0 
Query:    1 MAELEGQMQDLLFFLKAQEEVKSSPRREELVGGSVVMGEGSGGAAGGK-GRAGGKETERERLVRRLKERSNSRRAGGRGTKPSR 83
            M+ELEGQMQDLLFFLK QE+VKSSPRR+E+VGGSVVM EG         GR G KETERERL RRLKERS+SRRAG  G KP+R
Sbjct:  927 MSELEGQMQDLLFFLKTQEKVKSSPRRQEIVGGSVVMEEGXXXXXXXXXGRGGAKETERERLARRLKERSHSRRAGSGGAKPNR 1010
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig680.33.8 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LFD9_ECTSI1.930e-2272.62UBP-type domain-containing protein n=2 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..83
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig680contigP-littoralis_Contig680:136613..137242 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig680.33.8mRNA_P-littoralis_Contig680.33.8Pylaiella littoralis U1_48mRNAP-littoralis_Contig680 134085..137820 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig680.33.8 ID=prot_P-littoralis_Contig680.33.8|Name=mRNA_P-littoralis_Contig680.33.8|organism=Pylaiella littoralis U1_48|type=polypeptide|length=84bp
MAELEGQMQDLLFFLKAQEEVKSSPRREELVGGSVVMGEGSGGAAGGKGR
AGGKETERERLVRRLKERSNSRRAGGRGTKPSR*
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