prot_P-littoralis_Contig66.220.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig66.220.1
Unique Nameprot_P-littoralis_Contig66.220.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length55
Homology
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BLAST of mRNA_P-littoralis_Contig66.220.1 vs. uniprot
Match: D7FZ90_ECTSI (Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ90_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 8.080e-13
Identity = 38/68 (55.88%), Postives = 50/68 (73.53%), Query Frame = 0 
Query:    1 RGRREAEPRQTLEKKFDVAELERNVKE-------------SSRWQEEGSDYLGKRVKRVFGRRVAGAT 55
            RG+REA+ +Q L+++FD+++LERN K+             S  W+EEGS+YLGKRVKRVFGRRVAGAT
Sbjct: 1333 RGKREADLKQALQERFDMSDLERNAKDRAMSMSDAAQSGGSMTWREEGSEYLGKRVKRVFGRRVAGAT 1400
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BLAST of mRNA_P-littoralis_Contig66.220.1 vs. uniprot
Match: A0A6H5KZ49_9PHAE (WSD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ49_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 2.060e-12
Identity = 37/68 (54.41%), Postives = 50/68 (73.53%), Query Frame = 0 
Query:    1 RGRREAEPRQTLEKKFDVAELERNVKE-------------SSRWQEEGSDYLGKRVKRVFGRRVAGAT 55
            RG+REA+ +Q L+++FD+++LER+ K+             S  W+EEGS+YLGKRVKRVFGRRVAGAT
Sbjct:  591 RGKREADLKQALQERFDISDLERDAKDRAISMSDAAKSGGSMSWREEGSEYLGKRVKRVFGRRVAGAT 658
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig66.220.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZ90_ECTSI8.080e-1355.88Chain A, 4ank: A Designed Ankyrin Repeat Protein W... [more]
A0A6H5KZ49_9PHAE2.060e-1254.41WSD domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig66contigP-littoralis_Contig66:681500..681898 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig66.220.1mRNA_P-littoralis_Contig66.220.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig66 681500..681898 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig66.220.1 ID=prot_P-littoralis_Contig66.220.1|Name=mRNA_P-littoralis_Contig66.220.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=55bp
RGRREAEPRQTLEKKFDVAELERNVKESSRWQEEGSDYLGKRVKRVFGRR
VAGAT
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