prot_P-littoralis_Contig66.163.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig66.163.1
Unique Nameprot_P-littoralis_Contig66.163.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length243
Homology
BLAST of mRNA_P-littoralis_Contig66.163.1 vs. uniprot
Match: D7FHF5_ECTSI (Nup54 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHF5_ECTSI)

HSP 1 Score: 405 bits (1042), Expect = 7.000e-141
Identity = 211/240 (87.92%), Postives = 224/240 (93.33%), Query Frame = 0
Query:    5 PAAANAGSASQKEFEKLFEAYAAKNPANGEPNHNCRMKHVVYNQVDPSLRNSYTRPAYMDDKTWKKAK-DNPDPSKLAPVALIGWENLKERLVGQQKEMQKMAEFVALMQNQTSTGLRSVALVRTQMEASRRRHLAQAHRFLKLQRKLDAVRCLNKPLSDPERHLRMRLEGVHRSLGPPQQTLKDLNSTLLQGERQAEEVEEISDPEELRRIFHALEGQRDGLEHLMRIVKKDKQDLEVI 243
            P AANAGSASQKEFEKLFEAYAAKNPANGEPN +CRMKHVVYNQVDPSLRNSYTRP +MDDKTW+KA+ DNPDPSKLAP A+IGWE+LKERLVGQQ+EM+KMAEFVALMQN T  GLRSVALVRTQMEASRRRHLAQAHRFLKLQRKLDAVRCLNKPLSD ER LR RLEGVHRSLGPPQQTLKDLNS LLQGER  EEVEEI+DPEELRRIF ALEGQR+GL HLMRIVKKD+QDLE++
Sbjct:   54 PPAANAGSASQKEFEKLFEAYAAKNPANGEPNPSCRMKHVVYNQVDPSLRNSYTRPPHMDDKTWQKAEEDNPDPSKLAPAAVIGWESLKERLVGQQQEMKKMAEFVALMQNTTRGGLRSVALVRTQMEASRRRHLAQAHRFLKLQRKLDAVRCLNKPLSDDERQLRTRLEGVHRSLGPPQQTLKDLNSALLQGERHMEEVEEITDPEELRRIFQALEGQREGLTHLMRIVKKDRQDLEIM 293          
BLAST of mRNA_P-littoralis_Contig66.163.1 vs. uniprot
Match: A0A024TY86_9STRA (Nup54 domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TY86_9STRA)

HSP 1 Score: 114 bits (286), Expect = 7.250e-26
Identity = 72/214 (33.64%), Postives = 118/214 (55.14%), Query Frame = 0
Query:   40 RMKHVVYNQVDPSLRNSYTRPAYMDDKTWKKA-KDNPDPSKLAPVALIGWENLKERLVGQQKEMQKMAEFVALMQNQTSTGLRSVALVRTQMEASRRRHLAQAHRFLKLQRKLDAVRCLNKPLSDPERHLRMRLEGVHRSLGPPQQ---------TLKDLNSTLLQGERQAEEVEEISDPEELRRIFHALEGQRDGLEHLMRIVKKDKQDLEVI 243
            R KH+ YN VDPS ++ Y+RP ++ +K W +A +DNPDP+ L P A++G++ L  R+  QQ  ++K   +   +  Q     ++      ++   R++H+A  HR ++L RKL+  + L KPL   E HL   L+ V   L  P Q         TL+ L + L   +R    + E    E+L  +F  L+ QR+GLEHL RI+ +D +D++++
Sbjct:  256 RFKHMFYNAVDPSQKHLYSRPPHVGEKLWIQAQRDNPDPANLVPAAVVGFKELSTRIQLQQAHIKKFHGYAKDLVVQVQEMEKASRNTDVKLTQCRQQHIALFHRLVQLMRKLELFKQLRKPLHANEHHLAATLKHVQSLLDNPTQFKAHMHELMTLQSLQAALPTQQRPDAPLTE----EDLATVFRVLDKQREGLEHLTRILNQDMRDVQIM 465          
BLAST of mRNA_P-littoralis_Contig66.163.1 vs. uniprot
Match: W4G2Y8_9STRA (Nup54 domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G2Y8_9STRA)

HSP 1 Score: 112 bits (280), Expect = 4.210e-25
Identity = 68/214 (31.78%), Postives = 119/214 (55.61%), Query Frame = 0
Query:   40 RMKHVVYNQVDPSLRNSYTRPAYMDDKTWKKA-KDNPDPSKLAPVALIGWENLKERLVGQQKEMQKMAEFVALMQNQTSTGLRSVALVRTQMEASRRRHLAQAHRFLKLQRKLDAVRCLNKPLSDPERHLRMRLEGVHRSLGPPQQ---------TLKDLNSTLLQGERQAEEVEEISDPEELRRIFHALEGQRDGLEHLMRIVKKDKQDLEVI 243
            R K++ YN VDP+ ++ YTRP ++ +K W +A +DNPDP+ L P A++G++ L  R+  QQ  ++K   +   +  Q     ++      ++   R++H+A  HR ++L RKL+  + L KPL   E HL   L+ V   L  P Q         TL+ + + L   +R   ++ +    E++  +F  L+ QR+GLEHL RI+ +D +D++++
Sbjct:  237 RFKYMFYNAVDPAQKHLYTRPPHVGEKLWIQAQRDNPDPANLVPAAVVGFKELSTRIQLQQAHIKKFHGYAKDLVAQVQDMEKASRHTDVKLTQCRQQHIALFHRLVQLMRKLELFKQLRKPLHPSEHHLAATLKHVQSLLDNPTQFKAHMHELMTLQSMQAALPNQQRPDAQLTD----EDMATVFRVLDKQREGLEHLTRILNQDLRDVQIM 446          
BLAST of mRNA_P-littoralis_Contig66.163.1 vs. uniprot
Match: A0A6G0XI91_9STRA (Nup54 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XI91_9STRA)

HSP 1 Score: 112 bits (280), Expect = 5.240e-25
Identity = 68/209 (32.54%), Postives = 114/209 (54.55%), Query Frame = 0
Query:   40 RMKHVVYNQVDPSLRNSYTRPAYMDDKTWKKA-KDNPDPSKLAPVALIGWENLKERLVGQQKEMQKMAEFVALMQNQTSTGLRSVALVRTQMEASRRRHLAQAHRFLKLQRKLDAVRCLNKPLSDPERHLRMRLEGVHRSLGPPQQTLKDLNSTL----LQGERQAEEVEEISDPEELRRIFHALEGQRDGLEHLMRIVKKDKQDLEVI 243
            R KH+ YN VDPSL++ YTRP ++ +K W +A +DNPDP+   P A++G++ L  R+  QQ+E QK   +   +  Q      S      ++   R++H+A  HR ++L RKL+  + L KPL   E  L   L+ +   L  P Q    ++  +    LQ  +     +     E++  +F  L+ QR+GLEHL +I+ +D +D++++
Sbjct:  251 RFKHMFYNAVDPSLKHLYTRPPHIGEKLWIQAQRDNPDPTNCVPAAVLGFKELSTRIKLQQEEAQKFHGYAKDLVKQVEEMKVSSRHTDVKLAQCRQQHVALCHRLVQLMRKLEVFKQLRKPLHVDELRLAAMLKQIQSMLDNPTQFKAHMHELITLQALQEAKPHHRPDAQLTEEDMATVFRLLDKQREGLEHLTKILNQDIRDVQIM 459          
BLAST of mRNA_P-littoralis_Contig66.163.1 vs. uniprot
Match: A0A485LQI1_9STRA (Aste57867_23878 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LQI1_9STRA)

HSP 1 Score: 112 bits (279), Expect = 7.550e-25
Identity = 66/211 (31.28%), Postives = 121/211 (57.35%), Query Frame = 0
Query:   40 RMKHVVYNQVDPSLRNSYTRPAYMDDKTWKKA-KDNPDPSKLAPVALIGWENLKERLVGQQKEMQKMAEFVALMQNQTSTGLRSVALVRTQMEASRRRHLAQAHRFLKLQRKLDAVRCLNKPLSDPERHLRMRLEGVHRSLGPPQQTLKDLNSTL-LQGERQAEEVEEISDPEELRR-----IFHALEGQRDGLEHLMRIVKKDKQDLEVI 243
            R KH+ YN VDP+ ++ YTRP ++ +K W +A +DNPDP+   P A++G++ L  R+  QQ+  QK   +   +  Q     ++      ++   R++H+A  HR ++L RKL+  + L KPL+  E  L M L+ +   L  P Q    ++  + LQ  ++A + ++ ++ ++L       +F  L+ QR+GLEHL +I+ +D +D++++
Sbjct:  269 RFKHMFYNAVDPAHKHLYTRPPHVGEKLWIQAQRDNPDPTNCVPAAVLGFKELATRIKLQQEHTQKFNGYAVDLVKQVQEMEKASRQTDVKLAHCRQQHIALFHRLVQLMRKLEVFKQLRKPLAADEHRLAMTLKHIQGLLDNPTQFKAHMHELMTLQSMQEAVQSQQRAENQQLTEDDMVTVFRLLDKQREGLEHLTKILNQDLRDVQIM 479          
BLAST of mRNA_P-littoralis_Contig66.163.1 vs. uniprot
Match: A0A067CQG4_SAPPC (Nup54 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CQG4_SAPPC)

HSP 1 Score: 109 bits (273), Expect = 4.780e-24
Identity = 68/211 (32.23%), Postives = 116/211 (54.98%), Query Frame = 0
Query:   40 RMKHVVYNQVDPSLRNSYTRPAYMDDKTWKKA-KDNPDPSKLAPVALIGWENLKERLVGQQKEMQKMAEFVALMQNQTSTGLRSVALVRTQMEASRRRHLAQAHRFLKLQRKLDAVRCLNKPLSDPERHLRMRLEGVHRSLGPPQQTLKDLNSTLLQGERQA------EEVEEISDPEELRRIFHALEGQRDGLEHLMRIVKKDKQDLEVI 243
            R KH++YN VDP+ ++ Y RPA++ +K W +A +DNPDP+   P A+IG++ L  R+  QQ+   K A +   M  Q     ++      ++   R +H+A  HR ++L RKL+  + L KPL   E  L   L+ V   L  P Q    +N  +     QA      +E  ++S+ ++L  +F  ++ QR GLEH+ +++ +D +D+E++
Sbjct:  260 RFKHMLYNAVDPAQKHLYVRPAHISEKLWTQAQRDNPDPANCVPAAVIGFKELSTRIKLQQEHADKFATYAEDMVTQVKEMEKTSRETDVKLAQCRHQHVALFHRLIQLMRKLEVFKNLRKPLHADEVKLLETLKKVASMLDNPTQFKARMNELMALQAMQAAKPHPDQEQCQLSE-QDLHLVFGIMDRQRQGLEHVTKVLSQDMRDVEIM 469          
BLAST of mRNA_P-littoralis_Contig66.163.1 vs. uniprot
Match: A0A1V9ZK41_9STRA (Carbohydrate-binding protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZK41_9STRA)

HSP 1 Score: 108 bits (270), Expect = 2.250e-23
Identity = 70/211 (33.18%), Postives = 116/211 (54.98%), Query Frame = 0
Query:   40 RMKHVVYNQVDPSLRNSYTRPAYMDDKTWKKA-KDNPDPSKLAPVALIGWENLKERLVGQQKEMQKMAEFVALMQNQTSTGLRSVALVRTQMEASRRRHLAQAHRFLKLQRKLDAVRCLNKPLSDPERHLRMRLEGVHRSLGPPQQTLKDLNSTL-LQG---ERQAEEVEE--ISDPEELRRIFHALEGQRDGLEHLMRIVKKDKQDLEVI 243
            R KH+ YN VDP+ ++ Y RPA++ +K W +A +DNPDP+   P  +IG++ L  R+  QQ+   K A +   M  Q     +S      ++   R +H+A  HR +KL RKL+  + L KPL   E  L   L+ +   L  P Q    +N  + LQ    ++  +E +E  +SD  +L+ +F  +  QR GLEH+ +++ +D +D+E++
Sbjct:  418 RFKHMFYNAVDPAQKHLYVRPAHISEKLWTQAQRDNPDPANCVPAPVIGFKELSTRIKLQQEHADKFATYADDMVTQVKEMEKSSRETDVKLAQCRHQHVALFHRLIKLMRKLEVFKNLRKPLHQDEVRLFATLKKIASLLDNPTQFKARMNELMALQAMLKDKPMDEADEGKLSD-HDLQLVFGIMNRQRQGLEHVTKVLTQDLRDVEIM 627          
BLAST of mRNA_P-littoralis_Contig66.163.1 vs. uniprot
Match: UPI000A2A8828 (nucleoporin p54 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A8828)

HSP 1 Score: 88.6 bits (218), Expect = 1.630e-16
Identity = 63/195 (32.31%), Postives = 101/195 (51.79%), Query Frame = 0
Query:   58 TRPAYMDDKTWKKAK-DNPDPSKLAPVALIGWENLKERLVGQQKEMQKMAEFVALMQNQTSTGLRSVALVRTQMEASRRRHLAQAHRFLKLQRKLDAVRCLNKPLSDPERHLRMRLEGVHRSLGPPQQTLKDLNSTLLQGERQAE--------EVEEISDPEELRRIFHALEGQRDGLEHLMRIVKKDKQDLEVI 243
            T PA +D   W++AK DNPDP KL PV + G+ENLK+RL  +++E  +  + ++++  + +T   + A    ++   +R+HL  +HR L++  K +++R     +   E  LR+ LE +   L  P Q    LN  L Q   Q          E     DP     +   LE Q++GL HL+ I+K D +DL+ I
Sbjct:  321 TPPAGIDALLWEQAKKDNPDPQKLIPVPMTGFENLKKRLEFEEQETTQHQKRLSIISEEIATLQGNHATTMAKLAQFKRKHLELSHRVLEVMVKQESIRKAGYSVQAEEEQLRVHLESLQAELNAPLQFKARLNELLSQIRLQQSQXVGSDRTEGRYSMDPSLQNELKQHLEQQQEGLMHLISIIKDDLEDLKTI 515          
BLAST of mRNA_P-littoralis_Contig66.163.1 vs. uniprot
Match: A0A7S2UV49_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UV49_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 7.460e-16
Identity = 53/179 (29.61%), Postives = 95/179 (53.07%), Query Frame = 0
Query:   66 KTWKKA-KDNPDPSKLAPVALIGWENLKERLVGQQKEMQKMAEFVALMQNQTSTGLRSVALVRTQMEASRRRHLAQAHRFLKLQRKLDAVRCLNKPLSDPERHLRMRLEGVHRSLGPPQQTLKDLNSTLLQGERQAEEVEEISDPEELRRIFHALEGQRDGLEHLMRIVKKDKQDLEVI 243
            + W +A + NPDP  LAP  ++G   L  R+  Q +    +  +V  +++   +  ++     + ME SR RH   A++FL++  K++ +RC    ++  E  LR RLE + ++L  P   LK L         QA         ++L+ I +AL+ Q+ GLEHL+ ++KKD +D++++
Sbjct:    3 QAWDRAERANPDPESLAPTPIVGQAALLGRIQHQTQHTADLQSYVKRLRDTVHSLQQTAHRTESAMEKSRLRHRRLANKFLQVLLKVEVLRCQGLGVAPEEHQLRARLEQLAKALQDPHSRLKHLLQLAPHTATQAPGKPAHMGEDDLKAIHNALQNQKQGLEHLINVLKKDVRDVQLM 181          
BLAST of mRNA_P-littoralis_Contig66.163.1 vs. uniprot
Match: UPI001EAFAFE2 (nucleoporin p54-like isoform X2 n=6 Tax=Haliotis TaxID=6452 RepID=UPI001EAFAFE2)

HSP 1 Score: 82.8 bits (203), Expect = 1.680e-14
Identity = 60/191 (31.41%), Postives = 99/191 (51.83%), Query Frame = 0
Query:   60 PAYMDDKTWKKAK-DNPDPSKLAPVALIGWENLKERLVGQQKEMQKMAEFVALMQNQTSTGLRSVALVRTQMEASRRRHLAQAHRFLKLQRKLDAVRCLNKPLSDPERHLRMRLEGVHRSLGPPQQTLKDLNSTLLQ------GERQAEEVEEISDPEELRRIFHALEGQRDGLEHLMRIVKKDKQDLEVI 243
            PA +D   W++AK DNPDP++L PV +IG++ ++ RL  QQ++ +   + + +M    +      + +  + E  +R+HL   HR L++  K +  R +   +   E HL+++LE +   L  P Q    LN  + Q         Q +EV    D E    I   L+ Q+DGL HL++I+K D  DL +I
Sbjct:  392 PAGIDPVLWQQAKLDNPDPTRLIPVPMIGFKEVQRRLQHQQEQTRLHQQRLDVMSGDLTDLQNKHSNMLARQEEYKRKHLELGHRLLQVIVKQEIYRKMGYAIQAEEEHLKVQLEVLQTELNHPTQFKGRLNELMSQIRMQNHVSSQRQEVSFQMDTELQSEIKQLLKQQQDGLNHLIQILKDDASDLHLI 582          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig66.163.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHF5_ECTSI7.000e-14187.92Nup54 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A024TY86_9STRA7.250e-2633.64Nup54 domain-containing protein n=2 Tax=Aphanomyce... [more]
W4G2Y8_9STRA4.210e-2531.78Nup54 domain-containing protein n=1 Tax=Aphanomyce... [more]
A0A6G0XI91_9STRA5.240e-2532.54Nup54 domain-containing protein n=1 Tax=Aphanomyce... [more]
A0A485LQI1_9STRA7.550e-2531.28Aste57867_23878 protein n=1 Tax=Aphanomyces stella... [more]
A0A067CQG4_SAPPC4.780e-2432.23Nup54 domain-containing protein n=2 Tax=Saprolegni... [more]
A0A1V9ZK41_9STRA2.250e-2333.18Carbohydrate-binding protein n=1 Tax=Thraustotheca... [more]
UPI000A2A88281.630e-1632.31nucleoporin p54 n=1 Tax=Exaiptasia diaphana TaxID=... [more]
A0A7S2UV49_9STRA7.460e-1629.61Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
UPI001EAFAFE21.680e-1431.41nucleoporin p54-like isoform X2 n=6 Tax=Haliotis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 186..206
NoneNo IPR availableGENE3D1.20.5.170coord: 206..243
e-value: 4.6E-5
score: 25.2
NoneNo IPR availablePANTHERPTHR13000:SF0NUCLEOPORIN P54coord: 10..243
IPR025712Nucleoporin Nup54, alpha-helical domainPFAMPF13874Nup54coord: 59..190
e-value: 3.7E-25
score: 88.6
IPR024864Nucleoporin Nup54/Nup57/Nup44PANTHERPTHR13000NUCLEOPORIN P54coord: 10..243

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig66contigP-littoralis_Contig66:582471..586101 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig66.163.1mRNA_P-littoralis_Contig66.163.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig66 582471..586101 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig66.163.1 ID=prot_P-littoralis_Contig66.163.1|Name=mRNA_P-littoralis_Contig66.163.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=243bp
VVAAPAAANAGSASQKEFEKLFEAYAAKNPANGEPNHNCRMKHVVYNQVD
PSLRNSYTRPAYMDDKTWKKAKDNPDPSKLAPVALIGWENLKERLVGQQK
EMQKMAEFVALMQNQTSTGLRSVALVRTQMEASRRRHLAQAHRFLKLQRK
LDAVRCLNKPLSDPERHLRMRLEGVHRSLGPPQQTLKDLNSTLLQGERQA
EEVEEISDPEELRRIFHALEGQRDGLEHLMRIVKKDKQDLEVI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025712Nup54_alpha-helical_dom
IPR024864Nup54/Nup57/Nup44