prot_P-littoralis_Contig651.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig651.1.1
Unique Name	prot_P-littoralis_Contig651.1.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	233

Homology

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BLAST of mRNA_P-littoralis_Contig651.1.1 vs. uniprot
Match: D8LDL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDL5_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 7.420e-25
Identity = 87/180 (48.33%), Postives = 98/180 (54.44%), Query Frame = 0

Query:   34 QQTGRSVDNGXXXXXXXXXXSFLSS-SVSASEGGGDLGRQFC-RQRVSPPPPVVFIEGEGRNVSWRPRDDDRLLRRDVGG-----------GAGGAEVMRGVPDGGDARLILTATGGGRDDGEGGDEGAGEAEPREIRVTTGQLESAGSESENLGARRVRDEVWVELAGMLALSTSEPTA 200
            QQT RS  N           SFLSS S    E G  LGRQ   R  VSPP PVVF+EGEGRN  WRP DDDRLLR + G            GA GAE +      GDARLIL A        E  D+G  E   REIR+TTG+LE+A    E+     V+D  WVELAGMLA+S + PTA
Sbjct:  684 QQT-RSTGNVVEEHYYLDDASFLSSVSGGGEEDGSGLGRQLGGRLHVSPPGPVVFVEGEGRNRYWRPADDDRLLRGEGGSSAAAFGATSATGASGAEALHS----GDARLILAAK-------EDNDDGRPE---REIRLTTGRLEAAAVAPES-----VQDGAWVELAGMLAMSAAPPTA 843

[Close]

BLAST of mRNA_P-littoralis_Contig651.1.1 vs. uniprot
Match: A0A6H5L5H4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H4_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 1.300e-24
Identity = 74/137 (54.01%), Postives = 88/137 (64.23%), Query Frame = 0

Query:   75 RQRVSPPPPVVFIEGEGRNVSWRPRDDDRLLRRDVGG-----------GAGGAEVMRGVPDGGDARLILTATGGGRDDGEGGDEGAGEAEPREIRVTTGQLESAGSESENLGARRVRDEVWVELAGMLALSTSEPTA 200
            R+ VSPP PVVF+EGEGRN SWRP DDDRLLR + G            GAGGAE +    DGGDARLIL A  GGR   E  D+G  E   R+IR+TTG+LE+A    E+     V++  WVELAGMLA+S + PTA
Sbjct:  500 RRHVSPPGPVVFVEGEGRNRSWRPADDDRLLRGEGGSSAAAFGATSATGAGGAEDL----DGGDARLILAAKEGGR---EXDDDGRPE---RDIRLTTGRLEAAAVAPES-----VQNGAWVELAGMLAMSAAPPTA 621

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig651.1.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig651.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LDL5_ECTSI	7.420e-25	48.33	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L5H4_9PHAE	1.300e-24	54.01	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 213..233
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..154

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig651	contig	P-littoralis_Contig651:2118..2863 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig651.1.1	mRNA_P-littoralis_Contig651.1.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig651 2118..3316 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig651.1.1 ID=prot_P-littoralis_Contig651.1.1|Name=mRNA_P-littoralis_Contig651.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=233bp
MHRLRRLLTGCRCTFNPSPPSATLLPSASNAKGQQTGRSVDNGGGGGDYF
DDASFLSSSVSASEGGGDLGRQFCRQRVSPPPPVVFIEGEGRNVSWRPRD
DDRLLRRDVGGGAGGAEVMRGVPDGGDARLILTATGGGRDDGEGGDEGAG
EAEPREIRVTTGQLESAGSESENLGARRVRDEVWVELAGMLALSTSEPTA
GLTNVVGTTAAELPAAGEAAQPLEPAPTVSPEL