prot_P-littoralis_Contig601.20.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig601.20.1
Unique Nameprot_P-littoralis_Contig601.20.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length280
Homology
BLAST of mRNA_P-littoralis_Contig601.20.1 vs. uniprot
Match: A0A6H5KSL7_9PHAE (NifU domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KSL7_9PHAE)

HSP 1 Score: 350 bits (898), Expect = 9.300e-119
Identity = 228/279 (81.72%), Postives = 241/279 (86.38%), Query Frame = 0
Query:    5 SFVGRCVVTAAAVASLQASPAGAFAPPASVSSSLAPLPYCRSCSSSXXXXXXXXXXXXXXXXXXXXXSDAKQRQARGWG-AQRRAGTTGATVT--RMSSTDIESPFATPGMAEMGE-EDKDSLLTLTLENVETVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELNVENIEKVLDGVRPFLSVAGGSIKIQSLTGVSSIQPVVMLKMTGSSASLKSIRMEIMQRIQREFMMSSLRVDFA 279
            SF+    V A A  SLQ S AGAFAPPA V +  A   +CRSCSS XXXXXXXXXXXXXXXXXXXXX      QARGWG A RR G + + V   RMSSTDIESPFA+PGMA+MG+ ED D+LLTLTLENVETVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRL+QRIPEISEVVQSIPNGPEL VEN+EKVLDGVRPFLSVAGGSI IQSLTGVSSIQPV+ LKMTGSSASLKSIRMEIMQRIQREFMMSSLRV+FA
Sbjct:    4 SFMRGIAVAAVAAISLQNSRAGAFAPPAFVPAGPA---HCRSCSSXXXXXXXXXXXXXXXXXXXXXXXQ----QARGWGSAPRRNGASESAVAPRRMSSTDIESPFASPGMADMGDGEDADALLTLTLENVETVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLMQRIPEISEVVQSIPNGPELTVENVEKVLDGVRPFLSVAGGSINIQSLTGVSSIQPVITLKMTGSSASLKSIRMEIMQRIQREFMMSSLRVEFA 275          
BLAST of mRNA_P-littoralis_Contig601.20.1 vs. uniprot
Match: A0A835Z016_9STRA (NifU-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z016_9STRA)

HSP 1 Score: 256 bits (653), Expect = 7.740e-83
Identity = 131/181 (72.38%), Postives = 153/181 (84.53%), Query Frame = 0
Query:   99 SSTDIESPFATPGMAEMGEEDKDSLLTLTLENVETVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELNVENIEKVLDGVRPFLSVAGGSIKIQSLTGVSSIQPVVMLKMTGSSASLKSIRMEIMQRIQREFMMSSLRVDFA 279
            +   IESPFA  G    G+   D  L LTLENVE VLDEMRPYLMSDGGNVRVVEIDGPVVRLEL+GACGSCPSSTMTMKMGLERRL+++IPEISEVVQS+P GP+LN+E IEKVLDGVRPFLSVAGG+I + +L GV  +QP + LKMTG S+SL+S++MEIMQR+QR FM+S LR+D+A
Sbjct:    3 TEVQIESPFAGGGGVAGGD---DGPLPLTLENVELVLDEMRPYLMSDGGNVRVVEIDGPVVRLELQGACGSCPSSTMTMKMGLERRLIEKIPEISEVVQSMPEGPQLNMEEIEKVLDGVRPFLSVAGGAISVAALEGVGGMQPHIALKMTGKSSSLQSVKMEIMQRLQRHFMLSGLRIDWA 180          
BLAST of mRNA_P-littoralis_Contig601.20.1 vs. uniprot
Match: A0A7R9U202_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U202_9STRA)

HSP 1 Score: 232 bits (592), Expect = 8.320e-73
Identity = 118/182 (64.84%), Postives = 148/182 (81.32%), Query Frame = 0
Query:   97 RMSSTDIESPF--ATPGMAEMGEEDKDSLLTLTLENVETVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELNVENIEKVLDGVRPFLSVAGGSIKIQSLTGVSSIQPVVMLKMTGSSASLKSIRMEIMQRIQREFMMSSLRV 276
            +  S D+ESPF   TP   +      +S L LTL+NVE VLDEMRPYLMSDGGNV V EIDGP+VRLEL+GACG+CPSSTMTMKMGLERRL +RIPEISEVVQ++P+ PEL+   +E VLDGVRPFL VAGGSI +Q ++GV  +QP+++LKM GSSA+L+S+++EIMQR+QR FM++ LR+
Sbjct:   66 QQESIDVESPFQSGTPTARD------NSHLPLTLDNVELVLDEMRPYLMSDGGNVAVAEIDGPIVRLELQGACGTCPSSTMTMKMGLERRLKERIPEISEVVQAVPDAPELSEAGVESVLDGVRPFLQVAGGSITLQEISGVGGLQPMIVLKMEGSSATLQSVKVEIMQRLQRNFMVAGLRI 241          
BLAST of mRNA_P-littoralis_Contig601.20.1 vs. uniprot
Match: W7TNI1_9STRA (Nifu like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNI1_9STRA)

HSP 1 Score: 223 bits (569), Expect = 2.830e-69
Identity = 116/185 (62.70%), Postives = 149/185 (80.54%), Query Frame = 0
Query:   95 VTRMSSTDIESPFATPGMAEMGEEDKDSLLTLTLENVETVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELNVENIEKVLDGVRPFLSVAGGSIKIQSLTGVSSIQPVVMLKMTGSSASLKSIRMEIMQRIQREFMMSSLRVDFA 279
            ++R S+  I SPF + G+ + G +D    L LTLENVE VLDEMRPYLMSDGGNV V +IDGPVV+LEL+GACGSCPSSTMTMKMGLERRL ++IPEISEV+Q++P GP L+ ENI++VL+GVRPFL VAGGSI ++ ++G+  +QP+V+L M G++ SL S+RMEI QRI R FM+  LRV++ 
Sbjct:   63 LSRTSTDTITSPFES-GVKQGGGDD--GPLPLTLENVEMVLDEMRPYLMSDGGNVVVSDIDGPVVKLELQGACGSCPSSTMTMKMGLERRLKEKIPEISEVIQAMPEGPALSTENIDQVLEGVRPFLMVAGGSISVKEISGLGGLQPLVLLHMEGNNQSLFSVRMEITQRILRNFMVPGLRVEWT 244          
BLAST of mRNA_P-littoralis_Contig601.20.1 vs. uniprot
Match: A0A4D9D2Y8_9STRA (NifU domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2Y8_9STRA)

HSP 1 Score: 223 bits (567), Expect = 6.250e-69
Identity = 117/182 (64.29%), Postives = 146/182 (80.22%), Query Frame = 0
Query:   99 SSTD-IESPFATPGMAEMGEEDKDSLLTLTLENVETVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELNVENIEKVLDGVRPFLSVAGGSIKIQSLTGVSSIQPVVMLKMTGSSASLKSIRMEIMQRIQREFMMSSLRVDFA 279
            +STD I SPF +    + G+   D  L LTLENVE VLDEMRPYLMSDGGNV V EIDGPVV+LEL+GACGSCPSSTMTMKMGLERRL ++IPEISEV+Q++P GP L+ ENI++VL+GVRPFL VAGGSI ++ ++G+  +QP+V+L M G++ SL S+RMEI QRI R FM+  LRV++ 
Sbjct:   69 TSTDTITSPFESGVKQDGGD---DGPLPLTLENVEMVLDEMRPYLMSDGGNVVVSEIDGPVVKLELQGACGSCPSSTMTMKMGLERRLKEKIPEISEVIQAMPEGPALSTENIDQVLEGVRPFLMVAGGSISVKEISGLGGLQPLVLLHMEGNNQSLFSVRMEITQRILRNFMVPGLRVEWT 247          
BLAST of mRNA_P-littoralis_Contig601.20.1 vs. uniprot
Match: A0A7S1H4I0_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H4I0_9STRA)

HSP 1 Score: 219 bits (557), Expect = 2.190e-68
Identity = 116/182 (63.74%), Postives = 143/182 (78.57%), Query Frame = 0
Query:   98 MSSTDIESPFATPGMAEMGEEDKDSLLTLTLENVETVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELNVENIEKVLDGVRPFLSVAGGSIKIQSLTGVSSIQPVVMLKMTGSSASLKSIRMEIMQRIQREFMMSSLRVDFA 279
            +S  D  SP  TP   +  E D D  L LT +NVE VL+EMRPYL+SDGGNV + EIDGPVVRLEL+GACG+CPSST TMKMGLER+L ++IPEI EVVQS+P GPEL  E I  VLDGVRPFL VAGGSI ++S++G + +QP + LKM G+SASLKS+++EI QR+QR FM++ LRVD+A
Sbjct:    4 ISPFDSSSPAYTP--TDPVELD-DGPLELTWDNVELVLEEMRPYLISDGGNVAISEIDGPVVRLELQGACGTCPSSTQTMKMGLERKLREKIPEIQEVVQSMPEGPELCEEEINVVLDGVRPFLQVAGGSIDVESISGENGLQPTITLKMEGASASLKSVKLEIAQRLQRHFMVAGLRVDWA 182          
BLAST of mRNA_P-littoralis_Contig601.20.1 vs. uniprot
Match: A0A7S2E835_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2E835_TRICV)

HSP 1 Score: 221 bits (564), Expect = 2.670e-68
Identity = 110/159 (69.18%), Postives = 132/159 (83.02%), Query Frame = 0
Query:  121 DSLLTLTLENVETVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELNVENIEKVLDGVRPFLSVAGGSIKIQSLTGVSSIQPVVMLKMTGSSASLKSIRMEIMQRIQREFMMSSLRVDFA 279
            D+ L LT ENVE+VLDEMRP+L+ DGGNV + EIDGPVVRLEL+GACG+CPSST TMKMGLER L +RIPEI EVVQS+P GP L VE ++ VLDGVRPFL VAGG+I  +S+ G  S+QPV+ LKM GSSASL S+++EI QR+QR FMMS LRV++A
Sbjct:  106 DAPLELTYENVESVLDEMRPFLIQDGGNVAITEIDGPVVRLELQGACGTCPSSTQTMKMGLERGLRERIPEIQEVVQSLPEGPPLEVEQVDVVLDGVRPFLQVAGGTIDCESIRGEGSVQPVITLKMEGSSASLNSVKLEIAQRMQRHFMMSGLRVEWA 264          
BLAST of mRNA_P-littoralis_Contig601.20.1 vs. uniprot
Match: A0A7S2C848_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C848_9STRA)

HSP 1 Score: 220 bits (561), Expect = 4.030e-68
Identity = 106/156 (67.95%), Postives = 136/156 (87.18%), Query Frame = 0
Query:  124 LTLTLENVETVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELNVENIEKVLDGVRPFLSVAGGSIKIQSLTGVSSIQPVVMLKMTGSSASLKSIRMEIMQRIQREFMMSSLRVDFA 279
            L L  +NV+ +LDEMRPYL+SDGGNV + EIDGPVV+LEL+GACGSCPSSTMTMKMGLERRL + IPEISEVVQ++P+ P L  E+++ +L+G+RPFL VAGG I+I+SLTGV SIQP ++LKMTG+S+S++S+++EIMQRIQR FM+S LR+DF 
Sbjct:   89 LDLNWDNVDLILDEMRPYLISDGGNVVISEIDGPVVKLELQGACGSCPSSTMTMKMGLERRLKEAIPEISEVVQAMPDSPPLTEESVDGILEGIRPFLQVAGGKIEIESLTGVDSIQPQLVLKMTGASSSIQSVKLEIMQRIQRFFMISGLRIDFV 244          
BLAST of mRNA_P-littoralis_Contig601.20.1 vs. uniprot
Match: A0A7S1G1H4_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G1H4_9STRA)

HSP 1 Score: 218 bits (556), Expect = 2.600e-67
Identity = 108/157 (68.79%), Postives = 133/157 (84.71%), Query Frame = 0
Query:  123 LLTLTLENVETVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELNVENIEKVLDGVRPFLSVAGGSIKIQSLTGVSSIQPVVMLKMTGSSASLKSIRMEIMQRIQREFMMSSLRVDFA 279
            +L LTLENVE VLDEMRP+L +DGG+V + +IDGPVV+L+LEGACG+CPSST TMKMGLERRL +RIPEI EVVQ++P GP LN + I  VLDGVRPFL+VAGGSI I S++G  S+QPV+ L+MTG+SASL S+++EI QRIQR FMMS LR+ +A
Sbjct:   79 ILDLTLENVEIVLDEMRPFLQADGGDVSIDDIDGPVVKLQLEGACGTCPSSTQTMKMGLERRLKERIPEIQEVVQAMPEGPPLNEDQINVVLDGVRPFLNVAGGSIDIASISGEMSVQPVITLEMTGASASLNSVKLEIEQRIQRHFMMSGLRITWA 235          
BLAST of mRNA_P-littoralis_Contig601.20.1 vs. uniprot
Match: A0A7S2DPW5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DPW5_9STRA)

HSP 1 Score: 216 bits (550), Expect = 1.440e-66
Identity = 104/155 (67.10%), Postives = 133/155 (85.81%), Query Frame = 0
Query:  124 LTLTLENVETVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELNVENIEKVLDGVRPFLSVAGGSIKIQSLTGVSSIQPVVMLKMTGSSASLKSIRMEIMQRIQREFMMSSLRVDF 278
            L LTLENVE VLD MRPYL+SDGGNV V EIDGPVV LEL+GACGSCPSST+TMKMGLER L + IPEI EV+Q++P+ PELN   +E VLDG+RPFL VAGG I I  ++G++S+QP+++LKMTG+S+S++S+++EIMQR+QR FM+S LR+D+
Sbjct:   80 LVLTLENVELVLDRMRPYLISDGGNVVVKEIDGPVVILELQGACGSCPSSTVTMKMGLERGLKEAIPEIQEVIQALPDMPELNETEVETVLDGIRPFLQVAGGEISISEISGLNSVQPLLVLKMTGASSSIQSVKLEIMQRLQRHFMLSGLRIDW 234          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig601.20.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSL7_9PHAE9.300e-11981.72NifU domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835Z016_9STRA7.740e-8372.38NifU-like domain-containing protein n=1 Tax=Tribon... [more]
A0A7R9U202_9STRA8.320e-7364.84Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
W7TNI1_9STRA2.830e-6962.70Nifu like protein n=1 Tax=Nannochloropsis gaditana... [more]
A0A4D9D2Y8_9STRA6.250e-6964.29NifU domain-containing protein n=1 Tax=Nannochloro... [more]
A0A7S1H4I0_9STRA2.190e-6863.74Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A7S2E835_TRICV2.670e-6869.18Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2C848_9STRA4.030e-6867.95Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S1G1H4_9STRA2.600e-6768.79Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2DPW5_9STRA1.440e-6667.10Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR034904Fe-S cluster assembly domain superfamilyGENE3D3.30.300.130coord: 204..273
e-value: 9.5E-11
score: 43.7
IPR034904Fe-S cluster assembly domain superfamilyGENE3D3.30.300.130coord: 123..200
e-value: 3.1E-28
score: 99.6
IPR034904Fe-S cluster assembly domain superfamilySUPERFAMILY117916Fe-S cluster assembly (FSCA) domain-likecoord: 207..269
IPR034904Fe-S cluster assembly domain superfamilySUPERFAMILY117916Fe-S cluster assembly (FSCA) domain-likecoord: 128..199
IPR001075NIF system FeS cluster assembly, NifU, C-terminalPFAMPF01106NifUcoord: 131..196
e-value: 5.7E-25
score: 87.3
coord: 210..268
e-value: 8.9E-5
score: 22.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..78
NoneNo IPR availablePANTHERPTHR11178:SF25NIFU-LIKE PROTEIN 3, CHLOROPLASTICcoord: 57..266
NoneNo IPR availablePANTHERPTHR11178IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATEDcoord: 57..266

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig601contigP-littoralis_Contig601:85844..93468 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig601.20.1mRNA_P-littoralis_Contig601.20.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig601 85654..95212 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig601.20.1 ID=prot_P-littoralis_Contig601.20.1|Name=mRNA_P-littoralis_Contig601.20.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=280bp
MRSQSFVGRCVVTAAAVASLQASPAGAFAPPASVSSSLAPLPYCRSCSSS
ASALLPPGSSSSSRRSSSSSNSDAKQRQARGWGAQRRAGTTGATVTRMSS
TDIESPFATPGMAEMGEEDKDSLLTLTLENVETVLDEMRPYLMSDGGNVR
VVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIP
NGPELNVENIEKVLDGVRPFLSVAGGSIKIQSLTGVSSIQPVVMLKMTGS
SASLKSIRMEIMQRIQREFMMSSLRVDFA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR034904FSCA_dom_sf
IPR001075NIF_FeS_clus_asmbl_NifU_C