mRNA_P-littoralis_Contig601.20.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig601.20.1
Unique NamemRNA_P-littoralis_Contig601.20.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig601.20.1 vs. uniprot
Match: A0A6H5KSL7_9PHAE (NifU domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KSL7_9PHAE)

HSP 1 Score: 350 bits (898), Expect = 1.960e-110
Identity = 228/279 (81.72%), Postives = 241/279 (86.38%), Query Frame = 2 
Query:  203 SFVGRCVVTAAAVASLQASPAGAFAPPASVSSSLAPLPYCRSCSSSXXXXXXXXXXXXXXXXXXXXXSDAKQRQARGWG-AQRRAGTTGATVT--RMSSTDIESPFATPGMAEMGE-EDKDSLLTLTLENVETVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELNVENIEKVLDGVRPFLSVAGGSIKIQSLTGVSSIQPVVMLKMTGSSASLKSIRMEIMQRIQREFMMSSLRVDFA 1027
            SF+    V A A  SLQ S AGAFAPPA V +  A   +CRSCSS XXXXXXXXXXXXXXXXXXXXX      QARGWG A RR G + + V   RMSSTDIESPFA+PGMA+MG+ ED D+LLTLTLENVETVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRL+QRIPEISEVVQSIPNGPEL VEN+EKVLDGVRPFLSVAGGSI IQSLTGVSSIQPV+ LKMTGSSASLKSIRMEIMQRIQREFMMSSLRV+FA
Sbjct:    4 SFMRGIAVAAVAAISLQNSRAGAFAPPAFVPAGPA---HCRSCSSXXXXXXXXXXXXXXXXXXXXXXXQ----QARGWGSAPRRNGASESAVAPRRMSSTDIESPFASPGMADMGDGEDADALLTLTLENVETVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLMQRIPEISEVVQSIPNGPELTVENVEKVLDGVRPFLSVAGGSINIQSLTGVSSIQPVITLKMTGSSASLKSIRMEIMQRIQREFMMSSLRVEFA 275
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BLAST of mRNA_P-littoralis_Contig601.20.1 vs. uniprot
Match: A0A835Z016_9STRA (NifU-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z016_9STRA)

HSP 1 Score: 256 bits (654), Expect = 3.560e-76
Identity = 131/181 (72.38%), Postives = 153/181 (84.53%), Query Frame = 2 
Query:  485 SSTDIESPFATPGMAEMGEEDKDSLLTLTLENVETVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELNVENIEKVLDGVRPFLSVAGGSIKIQSLTGVSSIQPVVMLKMTGSSASLKSIRMEIMQRIQREFMMSSLRVDFA 1027
            +   IESPFA  G    G+   D  L LTLENVE VLDEMRPYLMSDGGNVRVVEIDGPVVRLEL+GACGSCPSSTMTMKMGLERRL+++IPEISEVVQS+P GP+LN+E IEKVLDGVRPFLSVAGG+I + +L GV  +QP + LKMTG S+SL+S++MEIMQR+QR FM+S LR+D+A
Sbjct:    3 TEVQIESPFAGGGGVAGGD---DGPLPLTLENVELVLDEMRPYLMSDGGNVRVVEIDGPVVRLELQGACGSCPSSTMTMKMGLERRLIEKIPEISEVVQSMPEGPQLNMEEIEKVLDGVRPFLSVAGGAISVAALEGVGGMQPHIALKMTGKSSSLQSVKMEIMQRLQRHFMLSGLRIDWA 180
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BLAST of mRNA_P-littoralis_Contig601.20.1 vs. uniprot
Match: A0A7R9U202_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U202_9STRA)

HSP 1 Score: 233 bits (594), Expect = 7.790e-67
Identity = 118/182 (64.84%), Postives = 148/182 (81.32%), Query Frame = 2 
Query:  479 RMSSTDIESPF--ATPGMAEMGEEDKDSLLTLTLENVETVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELNVENIEKVLDGVRPFLSVAGGSIKIQSLTGVSSIQPVVMLKMTGSSASLKSIRMEIMQRIQREFMMSSLRV 1018
            +  S D+ESPF   TP   +      +S L LTL+NVE VLDEMRPYLMSDGGNV V EIDGP+VRLEL+GACG+CPSSTMTMKMGLERRL +RIPEISEVVQ++P+ PEL+   +E VLDGVRPFL VAGGSI +Q ++GV  +QP+++LKM GSSA+L+S+++EIMQR+QR FM++ LR+
Sbjct:   66 QQESIDVESPFQSGTPTARD------NSHLPLTLDNVELVLDEMRPYLMSDGGNVAVAEIDGPIVRLELQGACGTCPSSTMTMKMGLERRLKERIPEISEVVQAVPDAPELSEAGVESVLDGVRPFLQVAGGSITLQEISGVGGLQPMIVLKMEGSSATLQSVKVEIMQRLQRNFMVAGLRI 241
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BLAST of mRNA_P-littoralis_Contig601.20.1 vs. uniprot
Match: W7TNI1_9STRA (Nifu like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNI1_9STRA)

HSP 1 Score: 224 bits (570), Expect = 2.150e-63
Identity = 116/185 (62.70%), Postives = 149/185 (80.54%), Query Frame = 2 
Query:  473 VTRMSSTDIESPFATPGMAEMGEEDKDSLLTLTLENVETVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELNVENIEKVLDGVRPFLSVAGGSIKIQSLTGVSSIQPVVMLKMTGSSASLKSIRMEIMQRIQREFMMSSLRVDFA 1027
            ++R S+  I SPF + G+ + G +D    L LTLENVE VLDEMRPYLMSDGGNV V +IDGPVV+LEL+GACGSCPSSTMTMKMGLERRL ++IPEISEV+Q++P GP L+ ENI++VL+GVRPFL VAGGSI ++ ++G+  +QP+V+L M G++ SL S+RMEI QRI R FM+  LRV++ 
Sbjct:   63 LSRTSTDTITSPFES-GVKQGGGDD--GPLPLTLENVEMVLDEMRPYLMSDGGNVVVSDIDGPVVKLELQGACGSCPSSTMTMKMGLERRLKEKIPEISEVIQAMPEGPALSTENIDQVLEGVRPFLMVAGGSISVKEISGLGGLQPLVLLHMEGNNQSLFSVRMEITQRILRNFMVPGLRVEWT 244
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BLAST of mRNA_P-littoralis_Contig601.20.1 vs. uniprot
Match: A0A4D9D2Y8_9STRA (NifU domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2Y8_9STRA)

HSP 1 Score: 223 bits (568), Expect = 4.520e-63
Identity = 117/182 (64.29%), Postives = 146/182 (80.22%), Query Frame = 2 
Query:  485 SSTD-IESPFATPGMAEMGEEDKDSLLTLTLENVETVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELNVENIEKVLDGVRPFLSVAGGSIKIQSLTGVSSIQPVVMLKMTGSSASLKSIRMEIMQRIQREFMMSSLRVDFA 1027
            +STD I SPF +    + G+   D  L LTLENVE VLDEMRPYLMSDGGNV V EIDGPVV+LEL+GACGSCPSSTMTMKMGLERRL ++IPEISEV+Q++P GP L+ ENI++VL+GVRPFL VAGGSI ++ ++G+  +QP+V+L M G++ SL S+RMEI QRI R FM+  LRV++ 
Sbjct:   69 TSTDTITSPFESGVKQDGGD---DGPLPLTLENVEMVLDEMRPYLMSDGGNVVVSEIDGPVVKLELQGACGSCPSSTMTMKMGLERRLKEKIPEISEVIQAMPEGPALSTENIDQVLEGVRPFLMVAGGSISVKEISGLGGLQPLVLLHMEGNNQSLFSVRMEITQRILRNFMVPGLRVEWT 247
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BLAST of mRNA_P-littoralis_Contig601.20.1 vs. uniprot
Match: A0A7S1H4I0_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H4I0_9STRA)

HSP 1 Score: 219 bits (558), Expect = 1.230e-62
Identity = 116/182 (63.74%), Postives = 143/182 (78.57%), Query Frame = 2 
Query:  482 MSSTDIESPFATPGMAEMGEEDKDSLLTLTLENVETVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELNVENIEKVLDGVRPFLSVAGGSIKIQSLTGVSSIQPVVMLKMTGSSASLKSIRMEIMQRIQREFMMSSLRVDFA 1027
            +S  D  SP  TP   +  E D D  L LT +NVE VL+EMRPYL+SDGGNV + EIDGPVVRLEL+GACG+CPSST TMKMGLER+L ++IPEI EVVQS+P GPEL  E I  VLDGVRPFL VAGGSI ++S++G + +QP + LKM G+SASLKS+++EI QR+QR FM++ LRVD+A
Sbjct:    4 ISPFDSSSPAYTP--TDPVELD-DGPLELTWDNVELVLEEMRPYLISDGGNVAISEIDGPVVRLELQGACGTCPSSTQTMKMGLERKLREKIPEIQEVVQSMPEGPELCEEEINVVLDGVRPFLQVAGGSIDVESISGENGLQPTITLKMEGASASLKSVKLEIAQRLQRHFMVAGLRVDWA 182
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BLAST of mRNA_P-littoralis_Contig601.20.1 vs. uniprot
Match: A0A7S2E835_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2E835_TRICV)

HSP 1 Score: 222 bits (565), Expect = 1.790e-62
Identity = 110/159 (69.18%), Postives = 132/159 (83.02%), Query Frame = 2 
Query:  551 DSLLTLTLENVETVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELNVENIEKVLDGVRPFLSVAGGSIKIQSLTGVSSIQPVVMLKMTGSSASLKSIRMEIMQRIQREFMMSSLRVDFA 1027
            D+ L LT ENVE+VLDEMRP+L+ DGGNV + EIDGPVVRLEL+GACG+CPSST TMKMGLER L +RIPEI EVVQS+P GP L VE ++ VLDGVRPFL VAGG+I  +S+ G  S+QPV+ LKM GSSASL S+++EI QR+QR FMMS LRV++A
Sbjct:  106 DAPLELTYENVESVLDEMRPFLIQDGGNVAITEIDGPVVRLELQGACGTCPSSTQTMKMGLERGLRERIPEIQEVVQSLPEGPPLEVEQVDVVLDGVRPFLQVAGGTIDCESIRGEGSVQPVITLKMEGSSASLNSVKLEIAQRMQRHFMMSGLRVEWA 264
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BLAST of mRNA_P-littoralis_Contig601.20.1 vs. uniprot
Match: A0A7S2C848_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C848_9STRA)

HSP 1 Score: 221 bits (562), Expect = 2.520e-62
Identity = 106/156 (67.95%), Postives = 136/156 (87.18%), Query Frame = 2 
Query:  560 LTLTLENVETVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELNVENIEKVLDGVRPFLSVAGGSIKIQSLTGVSSIQPVVMLKMTGSSASLKSIRMEIMQRIQREFMMSSLRVDFA 1027
            L L  +NV+ +LDEMRPYL+SDGGNV + EIDGPVV+LEL+GACGSCPSSTMTMKMGLERRL + IPEISEVVQ++P+ P L  E+++ +L+G+RPFL VAGG I+I+SLTGV SIQP ++LKMTG+S+S++S+++EIMQRIQR FM+S LR+DF 
Sbjct:   89 LDLNWDNVDLILDEMRPYLISDGGNVVISEIDGPVVKLELQGACGSCPSSTMTMKMGLERRLKEAIPEISEVVQAMPDSPPLTEESVDGILEGIRPFLQVAGGKIEIESLTGVDSIQPQLVLKMTGASSSIQSVKLEIMQRIQRFFMISGLRIDFV 244
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BLAST of mRNA_P-littoralis_Contig601.20.1 vs. uniprot
Match: A0A7S1G1H4_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G1H4_9STRA)

HSP 1 Score: 219 bits (557), Expect = 1.440e-61
Identity = 108/157 (68.79%), Postives = 133/157 (84.71%), Query Frame = 2 
Query:  557 LLTLTLENVETVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELNVENIEKVLDGVRPFLSVAGGSIKIQSLTGVSSIQPVVMLKMTGSSASLKSIRMEIMQRIQREFMMSSLRVDFA 1027
            +L LTLENVE VLDEMRP+L +DGG+V + +IDGPVV+L+LEGACG+CPSST TMKMGLERRL +RIPEI EVVQ++P GP LN + I  VLDGVRPFL+VAGGSI I S++G  S+QPV+ L+MTG+SASL S+++EI QRIQR FMMS LR+ +A
Sbjct:   79 ILDLTLENVEIVLDEMRPFLQADGGDVSIDDIDGPVVKLQLEGACGTCPSSTQTMKMGLERRLKERIPEIQEVVQAMPEGPPLNEDQINVVLDGVRPFLNVAGGSIDIASISGEMSVQPVITLEMTGASASLNSVKLEIEQRIQRHFMMSGLRITWA 235
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BLAST of mRNA_P-littoralis_Contig601.20.1 vs. uniprot
Match: A0A7S2DPW5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DPW5_9STRA)

HSP 1 Score: 216 bits (551), Expect = 6.800e-61
Identity = 104/155 (67.10%), Postives = 133/155 (85.81%), Query Frame = 2 
Query:  560 LTLTLENVETVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELNVENIEKVLDGVRPFLSVAGGSIKIQSLTGVSSIQPVVMLKMTGSSASLKSIRMEIMQRIQREFMMSSLRVDF 1024
            L LTLENVE VLD MRPYL+SDGGNV V EIDGPVV LEL+GACGSCPSST+TMKMGLER L + IPEI EV+Q++P+ PELN   +E VLDG+RPFL VAGG I I  ++G++S+QP+++LKMTG+S+S++S+++EIMQR+QR FM+S LR+D+
Sbjct:   80 LVLTLENVELVLDRMRPYLISDGGNVVVKEIDGPVVILELQGACGSCPSSTVTMKMGLERGLKEAIPEIQEVIQALPDMPELNETEVETVLDGIRPFLQVAGGEISISEISGLNSVQPLLVLKMTGASSSIQSVKLEIMQRLQRHFMLSGLRIDW 234
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig601.20.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSL7_9PHAE1.960e-11081.72NifU domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835Z016_9STRA3.560e-7672.38NifU-like domain-containing protein n=1 Tax=Tribon... [more]
A0A7R9U202_9STRA7.790e-6764.84Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
W7TNI1_9STRA2.150e-6362.70Nifu like protein n=1 Tax=Nannochloropsis gaditana... [more]
A0A4D9D2Y8_9STRA4.520e-6364.29NifU domain-containing protein n=1 Tax=Nannochloro... [more]
A0A7S1H4I0_9STRA1.230e-6263.74Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A7S2E835_TRICV1.790e-6269.18Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2C848_9STRA2.520e-6267.95Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S1G1H4_9STRA1.440e-6168.79Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2DPW5_9STRA6.800e-6167.10Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig601contigP-littoralis_Contig601:85654..95212 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FRC2
Preferred nameNIFU1
PFAMsNifU
Model size2774
Max annot lvl2759|Eukaryota
KEGG rclassRC00055,RC00523
KEGG koko:K04567
KEGG ReactionR03658
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
Hectar predicted targeting categorychloroplast
GOsGO:0003674,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006091,GO:0006790,GO:0006950,GO:0006952,GO:0006996,GO:0008150,GO:0008152,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009657,GO:0009658,GO:0009987,GO:0015979,GO:0016020,GO:0016043,GO:0016226,GO:0019684,GO:0022607,GO:0031163,GO:0032947,GO:0034622,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0048564,GO:0050896,GO:0051186,GO:0065003,GO:0071840,GO:0071944
Exons4
Evalue3.42e-123
EggNOG OGsCOG0694@1|root,KOG2358@2759|Eukaryota
Ec32 ortholog descriptionNifU-like protein 2, chloroplast precursor (AtCNfu2) (AtCnfU-V)
Ec32 orthologEc-26_002610.1
EC6.1.1.6
DescriptionNFU1 iron-sulfur cluster scaffold
Cds size840
COG categoryO
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig601.20.1prot_P-littoralis_Contig601.20.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig601 85844..93468 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791255.8121839-UTR-P-littoralis_Contig601:85653..858431680791255.8121839-UTR-P-littoralis_Contig601:85653..85843Pylaiella littoralis U1_48UTRP-littoralis_Contig601 85654..85843 +
1680791255.8653853-UTR-P-littoralis_Contig601:93468..952121680791255.8653853-UTR-P-littoralis_Contig601:93468..95212Pylaiella littoralis U1_48UTRP-littoralis_Contig601 93469..95212 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791255.827068-CDS-P-littoralis_Contig601:85843..862801680791255.827068-CDS-P-littoralis_Contig601:85843..86280Pylaiella littoralis U1_48CDSP-littoralis_Contig601 85844..86280 +
1680791255.8393457-CDS-P-littoralis_Contig601:91799..919801680791255.8393457-CDS-P-littoralis_Contig601:91799..91980Pylaiella littoralis U1_48CDSP-littoralis_Contig601 91800..91980 +
1680791255.8478281-CDS-P-littoralis_Contig601:92654..927561680791255.8478281-CDS-P-littoralis_Contig601:92654..92756Pylaiella littoralis U1_48CDSP-littoralis_Contig601 92655..92756 +
1680791255.8564746-CDS-P-littoralis_Contig601:93348..934681680791255.8564746-CDS-P-littoralis_Contig601:93348..93468Pylaiella littoralis U1_48CDSP-littoralis_Contig601 93349..93468 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig601.20.1

>prot_P-littoralis_Contig601.20.1 ID=prot_P-littoralis_Contig601.20.1|Name=mRNA_P-littoralis_Contig601.20.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=280bp
MRSQSFVGRCVVTAAAVASLQASPAGAFAPPASVSSSLAPLPYCRSCSSS
ASALLPPGSSSSSRRSSSSSNSDAKQRQARGWGAQRRAGTTGATVTRMSS
TDIESPFATPGMAEMGEEDKDSLLTLTLENVETVLDEMRPYLMSDGGNVR
VVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIP
NGPELNVENIEKVLDGVRPFLSVAGGSIKIQSLTGVSSIQPVVMLKMTGS
SASLKSIRMEIMQRIQREFMMSSLRVDFA*
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mRNA from alignment at P-littoralis_Contig601:85654..95212+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig601.20.1 ID=mRNA_P-littoralis_Contig601.20.1|Name=mRNA_P-littoralis_Contig601.20.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9559bp|location=Sequence derived from alignment at P-littoralis_Contig601:85654..95212+ (Pylaiella littoralis U1_48)
GCGGCAAGGAGAACATCTCATCTACGTTTTGCGACAAGGTGAAGGAAAAC
GACCCTTTTCTCGGTCTCTTCGCGCTTTTCTGCAAGCTCTGGGGGACGAC
GTTTCTGGAAGGTAGTCGCTCTAAGAAAAAGCACCGCCCCCAGGCTGTGC
GTCACCTTCACACACACACACATCAAAACTCCTTTGCACAATGAGGAGCC
AAAGTTTCGTGGGACGATGCGTGGTGACAGCAGCAGCAGTGGCCTCGCTC
CAGGCATCACCAGCGGGGGCGTTCGCGCCGCCCGCTTCCGTATCTTCGAG
CCTTGCGCCCCTGCCGTACTGCCGCTCATGCTCGTCATCGGCCTCAGCAT
TATTGCCTCCTGGTAGCAGCAGTAGCAGCAGACGCAGCAGCAGCAGCAGC
AACTCAGACGCGAAGCAGCGGCAAGCTCGAGGATGGGGAGCACAGCGGCG
GGCCGGAACCACGGGTGCCACCGTCACGCGTATGTCGTCGACGGATATCG
AATCTCCGTTCGCGACGCCGGGCATGGCCGAAATGGGGGAGGAGGACAAG
GACTCGCTGCTGACGCTCACTCTGGAGAATGTCGAGACGGTGCTTGACGA
GATGCGACCATACCTCATGTCCGACGGGTGAGCTCTCTCGTATGGTAGAT
GGGGGGCAATGCAATGCAGGCGGATGGTATAGCTGCTATGGCTGTAGTGC
TGGTGCTGGTGCGGAGCCTTTGCACTAATTGGGAGGTGTACGTTTGTACA
CCAGCTGCAGCAGCTCTCAAGGATTGGTCTTCGTTCGTAGTATTTTTTCT
ATTTTATTTGCCCTTCGTTGGCTCCTGGGGACGACCCACTTTGCTCTGAT
TCGTATACATAATAAGCCCAGGCCTCACAGCAGATTTACCGAGGCAGCGA
GGAGATGCAGTTTGCAGCAGGAGTAGTGAAGCATGTGTGTGTGTATGTGT
CTGTGTCTGTGTCTGTGTCTGTGTCTGTGTCTGTGTCTGTGTGTGTTGTC
ATCCCTTTCATTGGACGCCACTCTACACCTTGGGGACAGCAAAATGTGGC
GTGGCGGTCGATGTGGACCGTACGCCATCGCTTGTCGGGCCCACTACATT
GACGACGCCGCAATCGGTTGCGTTGACAGACCGGCTCAGCAGCAGTTTCG
ATCGTTCCTACTGCCGTACTAGTACACATGAAAATCGTGTTACACTCTCA
GCAGTATCTAATTTCCAACCATGATCCGGGTCGCTTTCATCTCTCGACAC
TCAGTCCCCCCCCCCGCCCTCCCATGTGGGATCATAACATCTAGGGCCTT
GACAACGAAAGGCATGCACTTCCACTTGTATTTAGATAAATGCTGTAGCC
TCTGGGCATGATGTTATGGGTCAATGACAGCCTCAGCCGAGTTAACCCCG
CCCCCCTCTCCTTTGTTTTGTCCCTCGAGAGAAAGGGCAAATTTTTCAGA
AATTTTTCGTAGGGTGGGACGAGACAGAAGTTTTGGGAGTTTAAATAGCC
GCCGGAGGCAGCAAAAAATGGGGAACGGGTAAAAAAAAACGAAGAAAGAG
AGAGGAACGCCCCCGCGGCGAGGCGGCAGAACTCCTCTGAGCAGCCGCAA
GGATAGATATGCCGTTCACAAGACGGCAGGAAGCAGTAGAACGTACAAAC
TCTTTCCTAGCCACAGGCCATACAGCACCTCTCCATGCTAAGCGTGGCTT
GATGAACTCTTGTGTCTACAAAGACACACACACGGCGGCCTGCAGTAGCA
AAAAGAATAATAGAAGGCACTGCTATCCGCTCTCTCATCACCGCACCGAT
CTTTGGATCTTTGGAGTATATACTGCGGTACATCCGTGTTTGTAGGATCA
ACGATGCTCCTGTATGTTCTCTTTTGGATTTCGGGTCGGTCGACGCCTGC
GTGTTGTTTTTTTCCTCTACAGCAGTTACAATAGTCTAATGTAGCAGGTA
AGCTGGTGCCTTTTTTTTTTTTCCGGAATTGTGGCGGGCGGTGGGCGGTG
GCATCTCGACGAAGCTTGAGTTTACTTCCAAAAAAAGCACATCGATAAGG
ACAACACAAAAGCATAAATACAATCACTGAAATGTGCACTCTTCACAAAT
GCACAACCTCTTCTGACCATCAACCACGTTCCTCCAATCTGATAGACTAA
TATCCGTGGTATTTTACAAGCAGTACCGCAACGTGTCACCAGCAAGCAAC
GCGCCGCACACCGCAGAGTTATGCGCGTGCAACCCAGGTTTGCAAAAGCC
TGAACTCCGACACGATTAGACTAGGATACACGATCAGCACACTTGCAGGG
ACCGTTGAACCGTTTTTGCCGCCACTTTGGGAACTCCGCAGATCACGCTG
CAAGAGCTCCGAGCAAAACGAGCTCAAAGATCCCGTCCCCAGCAACGACC
TGCTGAGGTACCGCCGGCTTGCGACAGCCAAGTCCATCCCTGCCTTCGCC
TTCACGCCGTAGTCGTTGGCAAGCCTGCCGAAGTCTAAGTTTACACCGAC
ACCGACCTGCATGGGAACAAACAGCGGGGTTGGTTGACAAGATATACCCC
TGCTCTCTATATACATATCGCACTCGTCTGAACAACGTAAACTCTACCTG
GTACGTGAAACGCACGGCCATCCTGCATGGAGAGGAACAACACGATCGTG
AGAGGTGTGAAAATCAAACGCTGTTCAACCAAGACAGCAAATCCGAACAA
GGCAAAGCAGGAAAGATCGAATTGGCTATGGACACAAAGTCGCGGGGGGC
ATACATGTTCTCACCTTCAGAATGTCCTCTCTTTCCAGAACGGCGCGCAA
AGCCTTCGGAAACACTTTTTTTCTGCCGCCGGGCCCGTACTTAACATGGA
AGATGAACGCGGTGCCGACCGCTGTTGCCAGCTGAACTGTGGCGATCGGC
CGTGCGCCGGAGGTCCAGACCTCCCATTCTACATCAAATCCGGCTGCAGG
TAACATCCCAGGAACGTTCACGTCGCCGTCTTTGCCTCCTGCAATAACTG
TGCAATCGCATGGCTCGAGATTCCACCATCGTCGCTCGCGGGCTGGATTA
CCGTGGGGGTCTTGTTTGCTGGAAACGTCAAAGGCAGAACGCTCTTGCCC
GACTCCGCCAGGGGTCTCGGGGAAAAACGAGCTGCTGCTGGCCCCAGCGC
CTCTCGAAGTACCTCTACGTCACCGCAGGAGTCGTCAGTACTGAACACCT
TCATGGATATGGCAGCGGGTACACATTAACGCAAACCCAGCAGTCGTTAG
TTCTACGTAAACACCTTCATGGATATGGCAGCTGGTACACAACAAAGTAT
CACTGACGTGCGTTTGGGAGGGTACTACTGGACTGGGAGCATTGCGCACT
AAATGCAAACGCAGAGTGATATGTCCACCTACCTCGATGGGATCAAAGCC
ATGAAGTTTGTACCGCTGTGCGAGTGCAGTAAAGGGCACCCGCATCTCTG
GCATGAAAGAGACGCCGGAATTCCGTAGCTGGGTCTGCCATGCAACGTGC
AACACAGAGGCCATCAGGGAACTTGACATACGATCAAGCAGCGTGAGCAT
CTGCAAAAACGGACGTAGCAAAACCAAATCCAAGAATCCGGGAGTGCATA
GCGAGCATCTGGCAAGCACAACACAGCGAAGAAACAATCGTCGGGAGACT
GGCAAGTCGTCCTTCCGTCATTGTATACACATCGCAGAACACAGCCCTTC
GGCTGGTCTCTCACTTGCAGCACGACCGTGTGGTGCTCGTTCATCACAGT
GTACGTCCCTTGAAAGACTCGATTGCCGTCCACCTTGACCGTCTTCGTGA
ACTTGTACGACGCATCACCCGCCAAGAACTTCCCGCCCACCATTTGTGCC
CGCCGCTGAAAACAAGGCCCCCCCTCTTCCAATACCACGTGCCACGCTGC
CCGCAGAGTTGCTTCGCCGGGTGGCTTCCCGTTGTATCCATCCTTGTCGT
CGAACTTGCCCAAGCATTCGGGGTGCTTTACCTTGGCTTGTACGGCCGGG
TCAATAGAGGGTTGCGCTACTTGCCTCAAGAACGACAGGTGGAAATATAA
CCTGAACGTTGGGAAGGCTCGAGGTGCAGAAAGTGTTTCAGCATGGCTTT
ACAACTGGCGGATATGAGGGTTGCACGCGGCTACAAGAAATTCTGCAGCT
ACCCAAGCTGTTTGTCTTCAAAAGAGATGAATTCATCCTCGCCCGGCCGC
TCAACATTGATCAATACATCTCTTCCCTCATGTGGAACACTTCCATGTGG
CTTTCGCGTAGGTGACGAGCCAACGTCGCGAAGCCTCCTCGCGATAAAAG
GCTCTGCCCAATACGGGTCACCAGGTGGGTGTCGATTGCAACGTGCCGTA
GGACGAGGGCCGGGCACAGAAGAAACCGCGGGAGCCGTTTCTGGACGTCG
GGGTGCCATCCAGCAAACCTGTGTGTGCGCCTGATAAATAGCCCATGACA
GCCCATTCGAGTAGTACACAAGCAGGGCATGAACGAAAACAGTTCAGCAG
TGGAAAAGTGGCACACGTGTGCTCTTGACAACGCACGGCAGACTCGCATC
TTCCGGCACGAACACCAGACTGAATTGGGGGCAATGACTGGCAACAATTG
TACTATTCCTTCGTGCTTACCCTTCTTCCGCACACGTGTTGCACTTGTAC
TGGAACGCAATCATATAATAATTCTCGTGTTCCGCGTGCACCAGTCGGCT
GCCAGGTTCCCAACCATCGCTCACCACCAGAGTTGCAGCCAGCAGACAGA
GCACCAAGGGTACAACGCTATTTGAGAGAGAGATGTCGCCGATGCAATAG
AATTTATTGCCATGCTACATATGCTACTGGCGTGTACGTCCGCGCAGTTC
TTCCCTTGTTTAAGCCCTAACCACGACAATTGTGGGGTATACTGGCACCT
GTTCGTAAACCCCGCAACGTGGACAGTCCGGGAGGCCGATTGCAGGGCAT
ATGTACTCAGGGACGCACAGGTACACCCTCTGCGCCAAAACCTGGAGCTT
GTGTGGCACGTCGCGGAAAATCTGATCCGGGCAGAACCACGGCGATGTTG
CTTCGAGCTTCCCCTTCAGTTTCCTTGTCTTTGACCCATGACCGAAGTGT
CGCACTCGACCGTTGACGGTCCTTTTTACATGCCGCGTATAAAGAGCGAT
TGCACTGCCTCCTCAGGCTCTGCATCAGGATCGCTCGGGGCTTCTGCTTC
CCCTGTCGATTTGGCTGTATCCCACGAACCGAAAGATCCGCCCAGTAGAA
GGGATCCACAGCGTCGTCGCTGCTGTCGCGGCTGCCCCCGGCAGATGTCG
GTGCGGCGGCAGCGTCGCTGCTGCCCCCGACAGATGTTGGCTGCACTTGT
GTTCCAGGAGTAGCGCTGCCATCACCCGTAGCACCAGCAGAAGAGGGTGT
TGGTTGCGCTCCAGAAGCAGCATTGCTAGATGCACCCGCAGCACCACCAC
CAGGAGACAGCAGTGTAGACCGAGGGTGTGCTCCAGGAGCAGTACTAGCT
GCGCCAGCAGCAGCAGCAGCAGCAGCAGCAGGCGAAGGAAATGCCTGGAA
AGGACTCGAACGTTGCGGTCGGCCATGAGCCTTGAACCTGTATGTGCCTG
GAGCAACTCCAGGGGTTTTCGAACCTGAAGCGTGCTTTGTGCCCTTTGGG
CAACCCCTGGCTCCTTTCGTCTCCTTCCCCTTGTCCATGATGCAGATGGT
GGCGGTGTGGGCGGTGCCCGGCTCAACAGACTTGCACAGAACCCCGCACG
AGCCCCAAATATATGGCATACTGAGCACAAGTTATGTTCTTTGTCGTTCT
TTGTCGATTCTTTGTCGTGAATGCGTGGATTTGATTGGTCATTCTTTGTC
GGAGTCTGTCCCACCCTCAAAATTTTTCGCCAGAGAAAGCGAAACGAAGG
GGGGGGGGTGGGAGGGGGGTAGAGCGTTCAATGACGAGTGAACTCGAACA
CTCGAGCGAGGGAGCAATTGTAATTGTTGCACACCATTCACTGGCATTTT
TTGTATCGTTGCGCCTCTCCTTGTGTCATCATGTGATGGAAGAAGGCGAT
GATGAAACAATGCGATGAAGAACACAAGCAACATCGTTCGTACCCCCCCG
TCTCCCCCTCCCTCCCTCCCCTCCCCCCCCTCACTGATTTCACCAGCGGA
AATGTGCGTGTGGTGGAGATCGACGGACCCGTGGTTCGTCTGGAGTTGGA
GGGTGCCTGCGGCAGCTGTCCGTCCAGCACCATGACGATGAAAATGGGGC
TGGAGAGGCGCTTGGTGCAGCGAATCCCGGAGATCAGCGAGGTGGTGCAG
TCCATCCCCAACGGGCCGGAGTTGAACGTGAGCGGTGTGAGGAGAATGAG
CTTCTATATTTGCCTTCTTCAGGGCGAGGGGGGGTGCCTCTCGTATCCTG
TAGCTAGCCGCACGCACGCACCCTGGAGATCAAGATCAATGAAGCAGTGA
GGAGGTTCATCTTTGACCGAAAAGGCCAGGACGGAGGAGGCTTGTGCAAT
GTGGGAATAAGAGGGAAACACAGGGCTGGTCCTATTCTGTCCTTGACGGG
TCAATGGTAGGGTTGGGGTTCCCATGATGCTTACCCAAACCTGTAGGTTT
GTGTGCTGCCTTTCGCGTTGCGGCACCGAGACCTGTACGTCTTGAGTTAA
CCCGTGGCATAGTTCGAGATCAAGGAACTCTTTTGGTTTCGGTAGCGATA
CGGGCGTCCGCTTTTTCGACGGATGACGCAAACAAAGTGCCACCAGTTGC
AAGAGGAAGAGGGATCAACCTTTCTGCCGTGCAGTACAGCAGTCGTGGTG
CGAGGCGGGCTTGGCAGCATGATACAATACGTGTTCACAACCTGCCCCCG
CAGCAATCACTTCTGCTGTTGACCGAGTTGATTGATTCCCTTTCTGACTC
CCACTTGAAAGCAAGACGCAATTGCCGATACAACTTGCCCCCCCCCCCCC
ACACACACATTCTTCATATTCTCCGTCACGAATGTATTACACCAAACATA
GGTTGAGAACATCGAGAAGGTGTTGGATGGGGTGCGGCCGTTCCTCAGCG
TGGCAGGAGGTAGCATCAAGATCCAGTCTCTCACCGGGGTATCTTCCATT
CAAGTGAGCGCGAACTGTCTGATGAGGCGTTTCGCGTGGAAGTAGCGCTA
CGTTTTTTTTCATTTTGTTTTCGCAGAGTTTTTTTTCAGACTGCCTGTTG
AATCAACCAAAGTGGGGCTGACCCTCCGGCCGAGTTTGAGTCTGAGTGTA
CGGAATAATGACCTGGCTTTTGATGACATCTGTGCGATCTTTACAAGGCT
CTCGTCAGTCACGTCTTCTTTTGGCAGATGACTGAGAAAAGAGTAGTACC
GGTTCGTGAAGAGGCCAAAACGGTTTTCTGAATGCTTCCAACAGCATCAA
AAATAACGACAGCAATCAACCATGGTTTCGTCGGTATGATTCAGATGGGT
CTGAGATGAACAACCATCGTGTCTCACCAAGATTTTTTCTCTACGATATG
GATCATCACTTGCAGTGTTTCCTACCGCCTGCCTATCACACTTGTGTAGC
AATATACAACGGCCATGCGTAATGGGTGACTAGCCCGCCTGCCTATCACA
CTTGTGTAGCAATATACAACGGCCATGCGTAATGGGTGACTAGCCCACCC
CTCCCCGCCCCCGTCCCATGTGCCGCGCGTATCGCCTGATTGTAGCCGGT
GGTTATGCTCAAGATGACGGGCTCGAGCGCCAGCCTGAAGTCCATCAGGA
TGGAGATCATGCAGCGCATCCAGCGCGAGTTCATGATGTCCTCCTTGAGA
GTGGACTTTGCTTAAGAGCGTCTTTTAGGGGAACAACAGCAGCTGTAGCA
GTAATCTGATTCGCTCAGAATATTGAAATGAAGGTTATGATAATCCCGCC
CCCTCTGTTTTGAGAGATTAAAAAGTGAGGGCGTGTGCTCCTTGAACGAC
GGCTGTGTTCTCGCTCAAATGGTGTGAGAGTTGAGCGTTTCTCGGCGATT
CGAGAGTTGGTTTGATCTTCGCGCTGACCAGTGTCTCGAGAGTAAATCTG
GCCGGCACTGGACAAAGGGATGTTCCGTCTAATGGCAGGAATATTTTGTC
CCAACAAAAATGTGGGTTGTTTCTGGGACTGGCTTGCCCTCGCAACGGGC
GTTTCTTTTCTTTTGTCGTACAGCAGTTGTTCCAACGAGTTGAGAAAACA
GTGGTTTTGAGTGGTCGTGGACGTTCAATTTCAAAGTTCGTTAAAGCGGA
GATTGTGAGATCAAATCTCGAGACCGAGATAATTTTGTGCGTTATTTTTT
GTGTTTGTCTAATTCTGCATCACAGCAGTTGAAAGCAGTTCTTCGTGACC
AAAAGAAATTCGACTTGACTTCCGGGCAAGGTAAACAGGACTGCTGAGCC
CTTACCGCGGTAAAGTTTGAAGGAAGTACATACCGCAGGAGGAAGGTGGA
CGGCCTTTCAGGAGAGGAATTCTTCTGTGCGACCCCATCTAAAAACCGCC
ATGTGTCGAGAGTTGCTCAAGGATGGGGGCCGTAGTAGGCACGGTTGTAC
AAAACTGATGGGATGAGGAGGTCGAGTTTTACGTTGTGTCTGTGGCCGTG
TGGCCCCTTACGGCTGTTGTTGCGTGTGTGTGTTCTTCTCCCAACCATTG
TGCACTATCGACATGGGGAAATTTTTCAATGCTGCTTCTATTCTTCCCTT
TTTGTCGACCCGCACTGCTGTTTGTCCCCCAGAATATACCAGGTTTTCTT
TATAACGTCTGTTGCCCTTCTCACACTCATGGGCAGGTTGCGTTTGGTTG
CCTCCGCAACAAGTTTTCGCCTCTGATTTGTTGTGCCCTACTCTATTTGC
TGCTGTCCATCGCGATGAAGTACCCATCGCTATGTTGTCACGGACCGTGA
AGCACCCCTGTCTGGCGTCTGCTGTTGTTTTGGCGTAGGCGAGGCTACAA
CAGTACAGTACATCTGTTCTCGAAGAGCTTTGCGTACGTACGTATGCATG
CACATCCATTTACTGGAGGTGCGTGGGAGAGGGCGGAAATGAGGTACCCT
TGGGCTTCTTCGTTCGGCAGTTCATGATGCCATTTTTGCTGCCTACTGCT
AGCTGGAAGTGCTGCTGCTGCTTGTCGACTCGGGTATCGAGGGACTGAGG
GGGGCTTCATGTCTAGATATCCGTATGATGTGTCGGCGCGGATGTGAGTT
TCCTCTGGTCAAAAGTGTATAGGCTCAATTTTCCTCCACGTGGAATATCT
TGTGCCTCTTCTAAGACTTTTTCTCAACATTTTTTTTTGTTTTCGTGAGT
GTCGGGAGCAGAGCTCAAAACCGAGGTATTTACTGAGCCCCCAATACAGC
ACCACCTACACCGACGGTAACACAGGGTGGCACCCGTGAAAAAGTTTAAT
CCACGGGTTGGGAGCCTTCCCATCGAAACTTTTATAACCGGTTTCCGAGC
ACTCTCCGGGCATGCATGTGCGTGACATGTTGATCTTGTAGACACCTTAC
TAGGGTTCCTTTGGAGAGTATCAAATCTAACACCCATGTACATTTCGTTT
CTTTTTTCC
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Coding sequence (CDS) from alignment at P-littoralis_Contig601:85654..95212+

>mRNA_P-littoralis_Contig601.20.1 ID=mRNA_P-littoralis_Contig601.20.1|Name=mRNA_P-littoralis_Contig601.20.1|organism=Pylaiella littoralis U1_48|type=CDS|length=840bp|location=Sequence derived from alignment at P-littoralis_Contig601:85654..95212+ (Pylaiella littoralis U1_48)
ATGAGGAGCCAAAGTTTCGTGGGACGATGCGTGGTGACAGCAGCAGCAGT
GGCCTCGCTCCAGGCATCACCAGCGGGGGCGTTCGCGCCGCCCGCTTCCG
TATCTTCGAGCCTTGCGCCCCTGCCGTACTGCCGCTCATGCTCGTCATCG
GCCTCAGCATTATTGCCTCCTGGTAGCAGCAGTAGCAGCAGACGCAGCAG
CAGCAGCAGCAACTCAGACGCGAAGCAGCGGCAAGCTCGAGGATGGGGAG
CACAGCGGCGGGCCGGAACCACGGGTGCCACCGTCACGCGTATGTCGTCG
ACGGATATCGAATCTCCGTTCGCGACGCCGGGCATGGCCGAAATGGGGGA
GGAGGACAAGGACTCGCTGCTGACGCTCACTCTGGAGAATGTCGAGACGG
TGCTTGACGAGATGCGACCATACCTCATGTCCGACGGCGGAAATGTGCGT
GTGGTGGAGATCGACGGACCCGTGGTTCGTCTGGAGTTGGAGGGTGCCTG
CGGCAGCTGTCCGTCCAGCACCATGACGATGAAAATGGGGCTGGAGAGGC
GCTTGGTGCAGCGAATCCCGGAGATCAGCGAGGTGGTGCAGTCCATCCCC
AACGGGCCGGAGTTGAACGTTGAGAACATCGAGAAGGTGTTGGATGGGGT
GCGGCCGTTCCTCAGCGTGGCAGGAGGTAGCATCAAGATCCAGTCTCTCA
CCGGGGTATCTTCCATTCAACCGGTGGTTATGCTCAAGATGACGGGCTCG
AGCGCCAGCCTGAAGTCCATCAGGATGGAGATCATGCAGCGCATCCAGCG
CGAGTTCATGATGTCCTCCTTGAGAGTGGACTTTGCTTAA
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