prot_P-littoralis_Contig60.126.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig60.126.2
Unique Nameprot_P-littoralis_Contig60.126.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length250
Homology
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BLAST of mRNA_P-littoralis_Contig60.126.2 vs. uniprot
Match: D8LGY2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGY2_ECTSI)

HSP 1 Score: 203 bits (517), Expect = 8.360e-62
Identity = 135/231 (58.44%), Postives = 157/231 (67.97%), Query Frame = 0 
Query:   22 QQQQASGWAAVEGVPVARAMAKPFAYVGIPIDGNEDDNYXXXXXXXXXXXXXXXXXGYAYGDEEAGAMRVHGNVGLGVGSDFAGAEEQARASARRDNLDFRERKRFTEAQARSRVEEDLRAIEVARINAKRRDAEGLDMRPHPGNRLEPEASIFGKEVDREGGTGATGAGPGXXXXXXXXXXXXXXXXXXEEAASTRG------SGGYQCAEYEPAEYVIPEYKSIYGDPS 246
            Q QQ  G+AAVEGVPVARA  +PFAYVG+PID   DDN+                   +Y +  AGA RVHG+V +GVG+D+ GA E A+ASARRDN  F E+KRFTEAQA+SRVEEDLRAIE ARINAKRRDAEGLDMRPHPGNRLEPE +    E +R+      GAG  XXXXXXXXXX        EE+A+ +G       GGYQ +EY PAEY IP+YKS+Y  PS
Sbjct:   37 QHQQPPGFAAVEGVPVARATMRPFAYVGVPID---DDNHNELRRPSTAAA--------SYDNSRAGAGRVHGDVSVGVGADYDGAAEAAKASARRDNAAFFEKKRFTEAQAKSRVEEDLRAIETARINAKRRDAEGLDMRPHPGNRLEPEDATPLGEKERD-----YGAGGXXXXXXXXXXXGKEAAAVGEESAAGKGCEQEASGGGYQFSEYVPAEYDIPDYKSVYERPS 251
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig60.126.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LGY2_ECTSI8.360e-6258.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..166
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..226
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig60contigP-littoralis_Contig60:554922..556311 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig60.126.2mRNA_P-littoralis_Contig60.126.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig60 554922..556311 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig60.126.2 ID=prot_P-littoralis_Contig60.126.2|Name=mRNA_P-littoralis_Contig60.126.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=250bp
TEQQPPKRPLQPSVRGSTQQPQQQQASGWAAVEGVPVARAMAKPFAYVGI
PIDGNEDDNYSSSSAVAAGGSLLPPPPGYAYGDEEAGAMRVHGNVGLGVG
SDFAGAEEQARASARRDNLDFRERKRFTEAQARSRVEEDLRAIEVARINA
KRRDAEGLDMRPHPGNRLEPEASIFGKEVDREGGTGATGAGPGGGAAAAA
AAAAAGKGSEQEEAASTRGSGGYQCAEYEPAEYVIPEYKSIYGDPSETY*
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