prot_P-littoralis_Contig6.52.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig6.52.1
Unique Name	prot_P-littoralis_Contig6.52.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	104

Homology

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BLAST of mRNA_P-littoralis_Contig6.52.1 vs. uniprot
Match: A0A6H5JT57_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT57_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 1.170e-14
Identity = 36/70 (51.43%), Postives = 46/70 (65.71%), Query Frame = 0

Query:   16 GVMLSTFGGKIKISTRVHDMYLHRCAADDIDHPYHGMCYVVWLRLVRTEKAAPTSSKKSRDDGHDEESES 85
            G +L+T GGKI+IS  +H++YL RC  +D +HPYHGMCY VW RLVR E   P   K +R    D + ES
Sbjct:  371 GAILNTSGGKIRISISLHELYLRRCLPNDTEHPYHGMCYAVWARLVRIENT-PRKQKPARRPNDDNDRES 439

[Close]

BLAST of mRNA_P-littoralis_Contig6.52.1 vs. uniprot
Match: A0A6H5KTA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTA2_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 1.200e-14
Identity = 36/70 (51.43%), Postives = 46/70 (65.71%), Query Frame = 0

Query:   16 GVMLSTFGGKIKISTRVHDMYLHRCAADDIDHPYHGMCYVVWLRLVRTEKAAPTSSKKSRDDGHDEESES 85
            G +L+T GGKI+IS  +H++YL RC  +D +HPYHGMCY VW RLVR E   P   K +R    D + ES
Sbjct: 3243 GAILNTSGGKIRISISLHELYLRRCLPNDTEHPYHGMCYAVWARLVRIENT-PRKQKPARRPNDDNDRES 3311

[Close]

BLAST of mRNA_P-littoralis_Contig6.52.1 vs. uniprot
Match: A0A6H5K882_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K882_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 1.830e-10
Identity = 26/53 (49.06%), Postives = 37/53 (69.81%), Query Frame = 0

Query:   16 GVMLSTFGGKIKISTRVHDMYLHRCAADDIDHPYHGMCYVVWLRLVRTEKAAP 68
            GV++S  GG++ ++   H +YLHRC+ +D +H  HGM YV W RLVRTE+  P
Sbjct:  799 GVVVSVVGGRLTVNQWAHVLYLHRCSPEDTEHALHGMSYVSWTRLVRTERYTP 851

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig6.52.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig6.52.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5JT57_9PHAE	1.170e-14	51.43	ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ...	[more]
A0A6H5KTA2_9PHAE	1.200e-14	51.43	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K882_9PHAE	1.830e-10	49.06	ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..95
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..104

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig6	contig	P-littoralis_Contig6:181480..181791 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig6.52.1	mRNA_P-littoralis_Contig6.52.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig6 181478..181791 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig6.52.1 ID=prot_P-littoralis_Contig6.52.1|Name=mRNA_P-littoralis_Contig6.52.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=104bp
DDIDDDNDDVDGGANGVMLSTFGGKIKISTRVHDMYLHRCAADDIDHPYH
GMCYVVWLRLVRTEKAAPTSSKKSRDDGHDEESESDEDNDFDDKNGGDDC
TDGI